Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5382 ATGTCAAACAATGTATTAAATTTTCTTATCTTGTTTCTCACTTTGTCTTTGTTTCCATTAAATTATTCTCTTAACCAAGAAGGTCTCTCTCTACTTTCATGGCTTTCATCTTTCAATTCTTCAAACTCTCTCACTACTACTAGCTTTTCATCATGGGATCCATCTCACAAAAATCCTTGCAGATGGGACTATATAAAATGTTCTTCAGAAGAGTTTGTCGAAGAGATCATGATAACATCGGTTGATCTTCGTAGCCGATTCCCTACACAGTTACTTTCTTTTAACCACCTTACAACTCTTGTAATCTCAAATGGAAATCTCACAGGTGAGATTCCAAGTTCAGTTGGAAACTTATCATCTTTGGTTACTCTTGATCTTAGTTTCAACACTTTAACAGGAAAAATACCAGAAGAAATAGGAAAGTTATCTGAACTGAGATGGTTATCTTTGAATTCGAATTCGTTGCACGGTGGAATTCCAATCACAATTGGTAACTGTTCAAAGCTTCAGCAATTGACACTGTTTGACAACCAGCTTTCCGGTATGATTCCGGGAGAAATAGGACAGTTGAAGGCTCTTGAATCGCTGAGAGCTGGCGGAAATCAAGGTATTTTCGGCGAAATTCCAATGCAGATATCAGATTGTAAGGCTTTAGTTTTTCTTGGACTTGCAGTTACTGGAATTTCTGGTGAGATTCCAGCAAGTATAGGAGAACTTCAAAATCTGAAGACACTTTCGGTTTACACAGCACATCTCACAGGTGAAATTCCATTAGAGATTCATAACTGTTCATCTTTGGAAGATTTGTTTCTGTATGAAAATCAGCTTTCTGGAAAAATTCCTTATGAATTAGGCTTCATGAAAAGCCTCAAGAGAGTATTGCTGTGGCAGAACAATTTAACTGGAACCATTCCAGAAACTCTTGGAAACTGTACAAATTTGAAGGTTATTGATTTCTCTTTGAATTCTCTGATTGGTCAGTTACCTTATACTCTCAGTAATCTTCTCTTATTGGAGGAATTTCTTTTGTCTGATAATAGTATTTATGGAGAAATACCTTCATATATTGGAAACTTTTCGATGCTGAAGCAACTTGAATTAGATAATAACAAATTCTCTGGCGAGATTCCATCTGTTATGGGGAACTTGAAGGAACTTACTCTCTTCTTTGCATGGCAGAATCAACTACATGGAAGTATACCAATAGAATTATCTAACTGTGACAAACTTGAAGCAATTGATCTTTCACACAATTTCCTCACTGGTCCAATTCCAAATTCTCTCTTTCATCTACAGAATTTAACTCAGTTGTTGCTGATATCAAACAGATTTTCAGGTCAAATTCCACCGGATATCGGAAGGTGCACCGGCTTGATCAGGTTAAGGCTTGGTTCAAACAACTTTACCGGTCAAATTCCGCAAGAAATAGGCCTTTTGAAAAGTTTAACCTTTCTAGAATTGTCAGATAATCAACTCAGTGGAGATATTCCTTATGAGATAGGTAACTGTGCTAATTTAGAAATGCTTGACTTGCACAGAAATGAGCTTCAAGGAACCATTCCTTCCTCATTAAGATTCTTAGACGGTCTTAATGTCTTGGATCTTTCAGCAAACAGAATCACTGGAAGCATTCCTAGGAGTTTTGGCGAGCTTACATCGTTAAATAAGTTGATTCTAAGTGGAAACCTTATCACCGGTTCGGTCCCTCTATCACTAGGACTTTGTAAGGATTTGCAGTTGTTGGATTTAAGTAACAATAAGATCATAGGTTATATTCCCAATGAGATTGGCTACTTGCAAGGATTGGATATCCTCTTGAACTTGAGTTGGAATTCTCTTACTGGTCCAATACCAACGACTTTCGCAAATCTCTCAAAACTTTCAATCTTGGACCTATCTTACAACAAGCTCAAAGGTAGTCTCATAGTGCTTGGTAATCTTGACAATCTTGTGTCTCTAAATGTTTCTTACAATAGATTTTCTGGTACACTTCCTGACACAAAGTTCTTCCAAGAACTGCCTTCTGCTGCATTTGCCGGTAACCCTGATCTTTGCATTAACAAGTGTCATGTCAGTGGAAATCTCCGAGGAAACAAGTCTTTAAGAAATATTATTATCTACACTTTCCTTGGTGTTATTTTAACTTCTGCTATTGTTACTTGTGGAGTTATTTTAGCATTAAGGATTCAAGGGGATAGTTTTTATGGGAATAATAGTTTTGATGAAGTTGAAATGGAATGGTCTTTCACTCCATTCCAAAAGCTTAACTTCAACATCAATGACATTCTCACAAAGCTGTCGGATTCAAACATTGTTGGAAAGGGTGGCTCGGGAGTTGTTTATCGTGTAGAGACACCAACAAGACAGGTTATTGCAGTGAAGAAGCTATGGCCAATAAAGAGTGAAGAGACACCAGAGAGAGATATGTTTACAGCAGAAGTTCAGACACTTGGATCAATAAGGCATAAGAATATAGTGAGACTTTTAGGATGCTGCGAAAATGGAAAATCTAAATTGCTCTTATTTGATTACATAAGTAATGGTAGTTTGTTTGGATTGCTACATGAAAAGAGATTGTTCTTGGATTGGGATGCAAGGTATAAGATCATACTTGGAACAGCTCATGGTTTAGAATATCTTCATCATGATTGTATCCCGCCAATTGTCCATCGCGATGTTAAGGCTAACAACATCTTGGTAGGTCCACAGTTTGAAGCTTTTCTTGCAGACTTTGGACTTGCAAAATTGGTCATTTCCTCAGAGTGTTCAAGAGCCTCACATGTAGTTGCAGGTTCTTGTGGATACATAGCTCCTGAATATGGATACAGTTTAAGGATCACAGAGAAGAGTGATGTATACAGTTATGGCGTTGTGCTTCTCGAGATGATAACTGGAATGGAACCAACTGATAACAGGATTCCAGAGAGTGCTCACATTGTAACATGGGTTATCAGTGAAATCAGGGAGAAGAAAAGAGAATTTGCATCTATTCTTGATCAACAATTAGTATTGCAGTGTGGAACAAGAACACCAGAGATGCTTCAAGTGCTAGGTGTAGCACTTCTATGTGTGAATCCATCACCAGAAGAAAGACCTACAATGAAAGATGTAACAGCAATGCTGAAGGAGATTAGGCATGGAAATGAAGATTTGGATAAACCAAATATGATCCATAAAGGCAGCATGGTTACCAATCCAAAAGCAGCAGTTCATTGCTCAAGTTTCTCAAGATCATGTGAACTTTTGATAGAATCATCATCTTCTTCATAG 3270 0.3749 MSNNVLNFLILFLTLSLFPLNYSLNQEGLSLLSWLSSFNSSNSLTTTSFSSWDPSHKNPCRWDYIKCSSEEFVEEIMITSVDLRSRFPTQLLSFNHLTTLVISNGNLTGEIPSSVGNLSSLVTLDLSFNTLTGKIPEEIGKLSELRWLSLNSNSLHGGIPITIGNCSKLQQLTLFDNQLSGMIPGEIGQLKALESLRAGGNQGIFGEIPMQISDCKALVFLGLAVTGISGEIPASIGELQNLKTLSVYTAHLTGEIPLEIHNCSSLEDLFLYENQLSGKIPYELGFMKSLKRVLLWQNNLTGTIPETLGNCTNLKVIDFSLNSLIGQLPYTLSNLLLLEEFLLSDNSIYGEIPSYIGNFSMLKQLELDNNKFSGEIPSVMGNLKELTLFFAWQNQLHGSIPIELSNCDKLEAIDLSHNFLTGPIPNSLFHLQNLTQLLLISNRFSGQIPPDIGRCTGLIRLRLGSNNFTGQIPQEIGLLKSLTFLELSDNQLSGDIPYEIGNCANLEMLDLHRNELQGTIPSSLRFLDGLNVLDLSANRITGSIPRSFGELTSLNKLILSGNLITGSVPLSLGLCKDLQLLDLSNNKIIGYIPNEIGYLQGLDILLNLSWNSLTGPIPTTFANLSKLSILDLSYNKLKGSLIVLGNLDNLVSLNVSYNRFSGTLPDTKFFQELPSAAFAGNPDLCINKCHVSGNLRGNKSLRNIIIYTFLGVILTSAIVTCGVILALRIQGDSFYGNNSFDEVEMEWSFTPFQKLNFNINDILTKLSDSNIVGKGGSGVVYRVETPTRQVIAVKKLWPIKSEETPERDMFTAEVQTLGSIRHKNIVRLLGCCENGKSKLLLFDYISNGSLFGLLHEKRLFLDWDARYKIILGTAHGLEYLHHDCIPPIVHRDVKANNILVGPQFEAFLADFGLAKLVISSECSRASHVVAGSCGYIAPEYGYSLRITEKSDVYSYGVVLLEMITGMEPTDNRIPESAHIVTWVISEIREKKREFASILDQQLVLQCGTRTPEMLQVLGVALLCVNPSPEERPTMKDVTAMLKEIRHGNEDLDKPNMIHKGSMVTNPKAAVHCSSFSRSCELLIESSSSS* 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5382 1089 ProSitePatterns Serine/Threonine protein kinases active-site signature. 888 900 IPR008271 GO:0004672|GO:0006468
Tpr2g5382 1089 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
Tpr2g5382 1089 Pfam Leucine rich repeat 505 564 IPR001611 GO:0005515
Tpr2g5382 1089 SUPERFAMILY L domain-like 36 392 - -
Tpr2g5382 1089 PANTHER LRR RECEPTOR-LIKE KINASE 3 1062 - -
Tpr2g5382 1089 Gene3D Transferase(Phosphotransferase) domain 1 845 1063 - -
Tpr2g5382 1089 PRINTS Leucine-rich repeat signature 530 543 - -
Tpr2g5382 1089 PRINTS Leucine-rich repeat signature 624 637 - -
Tpr2g5382 1089 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 3 1062 - -
Tpr2g5382 1089 SUPERFAMILY Protein kinase-like (PK-like) 762 1062 IPR011009 -
Tpr2g5382 1089 Gene3D Phosphorylase Kinase; domain 1 737 844 - -
Tpr2g5382 1089 SMART LRR_sd22_2 479 494 - -
Tpr2g5382 1089 SMART LRR_sd22_2 575 594 - -
Tpr2g5382 1089 SMART LRR_sd22_2 624 649 - -
Tpr2g5382 1089 SMART LRR_sd22_2 527 553 - -
Tpr2g5382 1089 SMART LRR_sd22_2 118 141 - -
Tpr2g5382 1089 SMART LRR_sd22_2 407 436 - -
Tpr2g5382 1089 SMART LRR_sd22_2 383 404 - -
Tpr2g5382 1089 SMART LRR_typ_2 431 455 IPR003591 -
Tpr2g5382 1089 SMART LRR_typ_2 118 142 IPR003591 -
Tpr2g5382 1089 SMART LRR_typ_2 527 550 IPR003591 -
Tpr2g5382 1089 SMART LRR_typ_2 551 574 IPR003591 -
Tpr2g5382 1089 SMART LRR_typ_2 479 503 IPR003591 -
Tpr2g5382 1089 SMART LRR_typ_2 624 646 IPR003591 -
Tpr2g5382 1089 SMART LRR_typ_2 287 311 IPR003591 -
Tpr2g5382 1089 SMART LRR_typ_2 647 680 IPR003591 -
Tpr2g5382 1089 Gene3D Ribonuclease Inhibitor 24 186 IPR032675 -
Tpr2g5382 1089 Pfam Protein kinase domain 769 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5382 1089 SUPERFAMILY RNI-like 323 665 - -
Tpr2g5382 1089 ProSitePatterns Protein kinases ATP-binding region signature. 772 800 IPR017441 GO:0005524
Tpr2g5382 1089 ProSiteProfiles Protein kinase domain profile. 766 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5382 1089 Gene3D Ribonuclease Inhibitor 407 692 IPR032675 -
Tpr2g5382 1089 Pfam Leucine Rich Repeat 409 431 IPR001611 GO:0005515
Tpr2g5382 1089 Pfam Leucine rich repeat N-terminal domain 25 68 IPR013210 -
Tpr2g5382 1089 SMART serkin_6 766 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5382 1089 Gene3D Ribonuclease Inhibitor 187 401 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5382 Tpr-Chr2 60629566 60634158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5382 22 1080 Receptor kinase-like Gene Family AT5G56040 47.145 0.0 916
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr2g5382 Pkinase 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5382 - - gmx:100807225 1681.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5382 2 60629566 60634158 Tpr2g5382 2 60629566 60634158 ECH