Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g5382 | ATGTCAAACAATGTATTAAATTTTCTTATCTTGTTTCTCACTTTGTCTTTGTTTCCATTAAATTATTCTCTTAACCAAGAAGGTCTCTCTCTACTTTCATGGCTTTCATCTTTCAATTCTTCAAACTCTCTCACTACTACTAGCTTTTCATCATGGGATCCATCTCACAAAAATCCTTGCAGATGGGACTATATAAAATGTTCTTCAGAAGAGTTTGTCGAAGAGATCATGATAACATCGGTTGATCTTCGTAGCCGATTCCCTACACAGTTACTTTCTTTTAACCACCTTACAACTCTTGTAATCTCAAATGGAAATCTCACAGGTGAGATTCCAAGTTCAGTTGGAAACTTATCATCTTTGGTTACTCTTGATCTTAGTTTCAACACTTTAACAGGAAAAATACCAGAAGAAATAGGAAAGTTATCTGAACTGAGATGGTTATCTTTGAATTCGAATTCGTTGCACGGTGGAATTCCAATCACAATTGGTAACTGTTCAAAGCTTCAGCAATTGACACTGTTTGACAACCAGCTTTCCGGTATGATTCCGGGAGAAATAGGACAGTTGAAGGCTCTTGAATCGCTGAGAGCTGGCGGAAATCAAGGTATTTTCGGCGAAATTCCAATGCAGATATCAGATTGTAAGGCTTTAGTTTTTCTTGGACTTGCAGTTACTGGAATTTCTGGTGAGATTCCAGCAAGTATAGGAGAACTTCAAAATCTGAAGACACTTTCGGTTTACACAGCACATCTCACAGGTGAAATTCCATTAGAGATTCATAACTGTTCATCTTTGGAAGATTTGTTTCTGTATGAAAATCAGCTTTCTGGAAAAATTCCTTATGAATTAGGCTTCATGAAAAGCCTCAAGAGAGTATTGCTGTGGCAGAACAATTTAACTGGAACCATTCCAGAAACTCTTGGAAACTGTACAAATTTGAAGGTTATTGATTTCTCTTTGAATTCTCTGATTGGTCAGTTACCTTATACTCTCAGTAATCTTCTCTTATTGGAGGAATTTCTTTTGTCTGATAATAGTATTTATGGAGAAATACCTTCATATATTGGAAACTTTTCGATGCTGAAGCAACTTGAATTAGATAATAACAAATTCTCTGGCGAGATTCCATCTGTTATGGGGAACTTGAAGGAACTTACTCTCTTCTTTGCATGGCAGAATCAACTACATGGAAGTATACCAATAGAATTATCTAACTGTGACAAACTTGAAGCAATTGATCTTTCACACAATTTCCTCACTGGTCCAATTCCAAATTCTCTCTTTCATCTACAGAATTTAACTCAGTTGTTGCTGATATCAAACAGATTTTCAGGTCAAATTCCACCGGATATCGGAAGGTGCACCGGCTTGATCAGGTTAAGGCTTGGTTCAAACAACTTTACCGGTCAAATTCCGCAAGAAATAGGCCTTTTGAAAAGTTTAACCTTTCTAGAATTGTCAGATAATCAACTCAGTGGAGATATTCCTTATGAGATAGGTAACTGTGCTAATTTAGAAATGCTTGACTTGCACAGAAATGAGCTTCAAGGAACCATTCCTTCCTCATTAAGATTCTTAGACGGTCTTAATGTCTTGGATCTTTCAGCAAACAGAATCACTGGAAGCATTCCTAGGAGTTTTGGCGAGCTTACATCGTTAAATAAGTTGATTCTAAGTGGAAACCTTATCACCGGTTCGGTCCCTCTATCACTAGGACTTTGTAAGGATTTGCAGTTGTTGGATTTAAGTAACAATAAGATCATAGGTTATATTCCCAATGAGATTGGCTACTTGCAAGGATTGGATATCCTCTTGAACTTGAGTTGGAATTCTCTTACTGGTCCAATACCAACGACTTTCGCAAATCTCTCAAAACTTTCAATCTTGGACCTATCTTACAACAAGCTCAAAGGTAGTCTCATAGTGCTTGGTAATCTTGACAATCTTGTGTCTCTAAATGTTTCTTACAATAGATTTTCTGGTACACTTCCTGACACAAAGTTCTTCCAAGAACTGCCTTCTGCTGCATTTGCCGGTAACCCTGATCTTTGCATTAACAAGTGTCATGTCAGTGGAAATCTCCGAGGAAACAAGTCTTTAAGAAATATTATTATCTACACTTTCCTTGGTGTTATTTTAACTTCTGCTATTGTTACTTGTGGAGTTATTTTAGCATTAAGGATTCAAGGGGATAGTTTTTATGGGAATAATAGTTTTGATGAAGTTGAAATGGAATGGTCTTTCACTCCATTCCAAAAGCTTAACTTCAACATCAATGACATTCTCACAAAGCTGTCGGATTCAAACATTGTTGGAAAGGGTGGCTCGGGAGTTGTTTATCGTGTAGAGACACCAACAAGACAGGTTATTGCAGTGAAGAAGCTATGGCCAATAAAGAGTGAAGAGACACCAGAGAGAGATATGTTTACAGCAGAAGTTCAGACACTTGGATCAATAAGGCATAAGAATATAGTGAGACTTTTAGGATGCTGCGAAAATGGAAAATCTAAATTGCTCTTATTTGATTACATAAGTAATGGTAGTTTGTTTGGATTGCTACATGAAAAGAGATTGTTCTTGGATTGGGATGCAAGGTATAAGATCATACTTGGAACAGCTCATGGTTTAGAATATCTTCATCATGATTGTATCCCGCCAATTGTCCATCGCGATGTTAAGGCTAACAACATCTTGGTAGGTCCACAGTTTGAAGCTTTTCTTGCAGACTTTGGACTTGCAAAATTGGTCATTTCCTCAGAGTGTTCAAGAGCCTCACATGTAGTTGCAGGTTCTTGTGGATACATAGCTCCTGAATATGGATACAGTTTAAGGATCACAGAGAAGAGTGATGTATACAGTTATGGCGTTGTGCTTCTCGAGATGATAACTGGAATGGAACCAACTGATAACAGGATTCCAGAGAGTGCTCACATTGTAACATGGGTTATCAGTGAAATCAGGGAGAAGAAAAGAGAATTTGCATCTATTCTTGATCAACAATTAGTATTGCAGTGTGGAACAAGAACACCAGAGATGCTTCAAGTGCTAGGTGTAGCACTTCTATGTGTGAATCCATCACCAGAAGAAAGACCTACAATGAAAGATGTAACAGCAATGCTGAAGGAGATTAGGCATGGAAATGAAGATTTGGATAAACCAAATATGATCCATAAAGGCAGCATGGTTACCAATCCAAAAGCAGCAGTTCATTGCTCAAGTTTCTCAAGATCATGTGAACTTTTGATAGAATCATCATCTTCTTCATAG | 3270 | 0.3749 | MSNNVLNFLILFLTLSLFPLNYSLNQEGLSLLSWLSSFNSSNSLTTTSFSSWDPSHKNPCRWDYIKCSSEEFVEEIMITSVDLRSRFPTQLLSFNHLTTLVISNGNLTGEIPSSVGNLSSLVTLDLSFNTLTGKIPEEIGKLSELRWLSLNSNSLHGGIPITIGNCSKLQQLTLFDNQLSGMIPGEIGQLKALESLRAGGNQGIFGEIPMQISDCKALVFLGLAVTGISGEIPASIGELQNLKTLSVYTAHLTGEIPLEIHNCSSLEDLFLYENQLSGKIPYELGFMKSLKRVLLWQNNLTGTIPETLGNCTNLKVIDFSLNSLIGQLPYTLSNLLLLEEFLLSDNSIYGEIPSYIGNFSMLKQLELDNNKFSGEIPSVMGNLKELTLFFAWQNQLHGSIPIELSNCDKLEAIDLSHNFLTGPIPNSLFHLQNLTQLLLISNRFSGQIPPDIGRCTGLIRLRLGSNNFTGQIPQEIGLLKSLTFLELSDNQLSGDIPYEIGNCANLEMLDLHRNELQGTIPSSLRFLDGLNVLDLSANRITGSIPRSFGELTSLNKLILSGNLITGSVPLSLGLCKDLQLLDLSNNKIIGYIPNEIGYLQGLDILLNLSWNSLTGPIPTTFANLSKLSILDLSYNKLKGSLIVLGNLDNLVSLNVSYNRFSGTLPDTKFFQELPSAAFAGNPDLCINKCHVSGNLRGNKSLRNIIIYTFLGVILTSAIVTCGVILALRIQGDSFYGNNSFDEVEMEWSFTPFQKLNFNINDILTKLSDSNIVGKGGSGVVYRVETPTRQVIAVKKLWPIKSEETPERDMFTAEVQTLGSIRHKNIVRLLGCCENGKSKLLLFDYISNGSLFGLLHEKRLFLDWDARYKIILGTAHGLEYLHHDCIPPIVHRDVKANNILVGPQFEAFLADFGLAKLVISSECSRASHVVAGSCGYIAPEYGYSLRITEKSDVYSYGVVLLEMITGMEPTDNRIPESAHIVTWVISEIREKKREFASILDQQLVLQCGTRTPEMLQVLGVALLCVNPSPEERPTMKDVTAMLKEIRHGNEDLDKPNMIHKGSMVTNPKAAVHCSSFSRSCELLIESSSSS* | 1090 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g5382 | 1089 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 888 | 900 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr2g5382 | 1089 | Pfam | Leucine rich repeat | 96 | 155 | IPR001611 | GO:0005515 | |
Tpr2g5382 | 1089 | Pfam | Leucine rich repeat | 505 | 564 | IPR001611 | GO:0005515 | |
Tpr2g5382 | 1089 | SUPERFAMILY | L domain-like | 36 | 392 | - | - | |
Tpr2g5382 | 1089 | PANTHER | LRR RECEPTOR-LIKE KINASE | 3 | 1062 | - | - | |
Tpr2g5382 | 1089 | Gene3D | Transferase(Phosphotransferase) domain 1 | 845 | 1063 | - | - | |
Tpr2g5382 | 1089 | PRINTS | Leucine-rich repeat signature | 530 | 543 | - | - | |
Tpr2g5382 | 1089 | PRINTS | Leucine-rich repeat signature | 624 | 637 | - | - | |
Tpr2g5382 | 1089 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 3 | 1062 | - | - | |
Tpr2g5382 | 1089 | SUPERFAMILY | Protein kinase-like (PK-like) | 762 | 1062 | IPR011009 | - | |
Tpr2g5382 | 1089 | Gene3D | Phosphorylase Kinase; domain 1 | 737 | 844 | - | - | |
Tpr2g5382 | 1089 | SMART | LRR_sd22_2 | 479 | 494 | - | - | |
Tpr2g5382 | 1089 | SMART | LRR_sd22_2 | 575 | 594 | - | - | |
Tpr2g5382 | 1089 | SMART | LRR_sd22_2 | 624 | 649 | - | - | |
Tpr2g5382 | 1089 | SMART | LRR_sd22_2 | 527 | 553 | - | - | |
Tpr2g5382 | 1089 | SMART | LRR_sd22_2 | 118 | 141 | - | - | |
Tpr2g5382 | 1089 | SMART | LRR_sd22_2 | 407 | 436 | - | - | |
Tpr2g5382 | 1089 | SMART | LRR_sd22_2 | 383 | 404 | - | - | |
Tpr2g5382 | 1089 | SMART | LRR_typ_2 | 431 | 455 | IPR003591 | - | |
Tpr2g5382 | 1089 | SMART | LRR_typ_2 | 118 | 142 | IPR003591 | - | |
Tpr2g5382 | 1089 | SMART | LRR_typ_2 | 527 | 550 | IPR003591 | - | |
Tpr2g5382 | 1089 | SMART | LRR_typ_2 | 551 | 574 | IPR003591 | - | |
Tpr2g5382 | 1089 | SMART | LRR_typ_2 | 479 | 503 | IPR003591 | - | |
Tpr2g5382 | 1089 | SMART | LRR_typ_2 | 624 | 646 | IPR003591 | - | |
Tpr2g5382 | 1089 | SMART | LRR_typ_2 | 287 | 311 | IPR003591 | - | |
Tpr2g5382 | 1089 | SMART | LRR_typ_2 | 647 | 680 | IPR003591 | - | |
Tpr2g5382 | 1089 | Gene3D | Ribonuclease Inhibitor | 24 | 186 | IPR032675 | - | |
Tpr2g5382 | 1089 | Pfam | Protein kinase domain | 769 | 1038 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g5382 | 1089 | SUPERFAMILY | RNI-like | 323 | 665 | - | - | |
Tpr2g5382 | 1089 | ProSitePatterns | Protein kinases ATP-binding region signature. | 772 | 800 | IPR017441 | GO:0005524 | |
Tpr2g5382 | 1089 | ProSiteProfiles | Protein kinase domain profile. | 766 | 1044 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g5382 | 1089 | Gene3D | Ribonuclease Inhibitor | 407 | 692 | IPR032675 | - | |
Tpr2g5382 | 1089 | Pfam | Leucine Rich Repeat | 409 | 431 | IPR001611 | GO:0005515 | |
Tpr2g5382 | 1089 | Pfam | Leucine rich repeat N-terminal domain | 25 | 68 | IPR013210 | - | |
Tpr2g5382 | 1089 | SMART | serkin_6 | 766 | 1041 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g5382 | 1089 | Gene3D | Ribonuclease Inhibitor | 187 | 401 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g5382 | Tpr-Chr2 | 60629566 | 60634158 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g5382 | 22 | 1080 | Receptor kinase-like Gene Family | AT5G56040 | 47.145 | 0.0 | 916 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Tpr2g5382 | Pkinase | 3.1e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g5382 | - | - | gmx:100807225 | 1681.77 |