Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5370 ATGAATCTATGCTGTTCTGACCATGCTGCAAGTGCAAAGGAACCTATGAAGAAATCTAAGAAAAAAGAACTATCTATGAAAGAAGAATCTTCTCCGAGCCGTCGCGATGAAAACAAAATTGTATTTTTTGAGGGGGATTGTAATCTTGCATTTGATCTAGAGGATCTGTTAAGCGCTTCTAGTAAGATTCTTGGAAAGGGTTCTATTGGAACAACATATAAGGCTGCTTTAGAGGATGTAACCACTGTGGTTGTGAAGAGATTGAAAGATGTTAATGTTGGGAAAAGAGAGTTTGAACAACATATGGAAATTGTAGGGAAAATTAAGCATGAAAATGTGGATGCATTAAGAGCATACTATTATTCAAAAGATGAGAAATTAGTAGTATATGATTATTATCATCAAGGCAGTGTTTATTCCATCTTACATGATGCATCAAATCAGTTTTCTGGTTTCGTCTCTGTCATTAGGGATGTTTCAATGAAATTTTTTCCACGTAGCTAA 504 0.3492 MNLCCSDHAASAKEPMKKSKKKELSMKEESSPSRRDENKIVFFEGDCNLAFDLEDLLSASSKILGKGSIGTTYKAALEDVTTVVVKRLKDVNVGKREFEQHMEIVGKIKHENVDALRAYYYSKDEKLVVYDYYHQGSVYSILHDASNQFSGFVSVIRDVSMKFFPRS* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5370 167 Pfam Protein tyrosine and serine/threonine kinase 61 148 IPR001245 GO:0004672|GO:0006468
Tpr2g5370 167 PANTHER LRR RECEPTOR-LIKE KINASE 3 145 - -
Tpr2g5370 167 Gene3D Phosphorylase Kinase; domain 1 16 132 - -
Tpr2g5370 167 PANTHER OS05G0588300 PROTEIN 3 145 - -
Tpr2g5370 167 ProSiteProfiles Protein kinase domain profile. 58 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5370 167 MobiDBLite consensus disorder prediction 1 32 - -
Tpr2g5370 167 MobiDBLite consensus disorder prediction 11 32 - -
Tpr2g5370 167 SUPERFAMILY Protein kinase-like (PK-like) 62 146 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5370 Tpr-Chr2 60527911 60528549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5370 21 143 Receptor kinase-like Gene Family AT4G23740 64.000 4.12e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr2g5370 PK_Tyr_Ser-Thr 8.2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5370 - - mtr:MTR_3g090665 202.601