Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5369 ATGGACAAGAACCTATTTCTCTTGTTCATGTTTTCAGCAGTGTTGGTTAGTGTTGAAGCTGAACCAATAGAAGATAAACAAGCTTTACTTGATTTCCTTAACAAAATGAATCATTCTCCACATCTCAATTGGGATGAGAATTCTTCTGTATGCCAAACATGGAGAGGAGTTACCTGCAACACCGATCAATCTCGAGTCATAGCGATTCGATTGCCTGGAGCCGGATTAAGCGGCCCAATTCCACCAAACACTCTTACTCGCCTTTCGGCTCTTGAGACAGTGAGTCTTAGATTAAATGGTATCACTGGTTTTTTCCCTGATGATTTCTCTGAGCTGAAAAACTTGACTAGTCTTTATCTTCAGTCTAACAAGTTTTCTGGACCATTGCCATTGGATTTTTCTGTTTGGAGTAATCTTTCTGTTGTTAATTTGTCCAACAATTCGTTTAATGGTAGCATCCCTTTTTCGCTTTCAAATCTAACTCATCTCAGTTCATTAGTCCTTGCAAATAACTCTCTTTCTGGTGTGATTCCTGATCTTAATATTTCTAGCTTACAGTTGCTGAATTTAGAAAACAATAATCTTAGCGGAGTTGTGCCGAAATCACTTATTAGATTTCCAAGTTGGGCTTTTTCTGGTAACAATCTTACATCAAATACTAGTACACTTCCTCCAGCTTTTCCTATGCATCCACCTTACACTTTTCCACCAAAGAAAACCAAAGGACTAAGCGAAACTGCATTATTGGGAATCATCATCGGTGTTTGCGCACTTGGATTTGCAGTGATTGCAGTTGTCATGATTTTGTGCTGCTATGACTTTGCTGCTTCTGGTGTAAAAGAATCCGTAATATCCAAGAAAAAAGAAGTATCTATGAAAGCAGAATCTTCCGCGAGTCGAGATAAAAACAAAATAGTATTTTTTGAGGATTGTAATCTTGCATTTGATTTAGAGGACCTTTTGAGAGCTTCTGCCGAGATTCTTGGAAAGGGTACGTTTGGAACAACGTACAAGGCGGCTTTAGAGGACGCAACTACTGTGGCGGTGAAGAGGTTGAAAGAGGTTACTGTCGGGAAAAGGGAATTTGAACAGCAGATGGAAGTGGTTGGGAAAATTAAGCATGAAAATGTGGATACATTAAGAGCTTACTATTATTCAAAGGATGAGAAACTTGTAGTATCTGATTATTATCAACAAGGCAGTGTTTCTTCCATCTTACATGGCAAAAGAGGGGAAGGAAGGACTAGTATAGATTGGTATAGCCGTTTAAGGATTGCGATTGGTACAGCGAGAGGCATTGCTCACATCCATACTCAACAAGGAGGGAAACTAGTTCATGGAAACATAAAAGCCTCAAACATCTTCATCAACTCACAAGGATATGGTTGTGTATCTGACATAGGTTTAACAACATTGATGAGTTCAATCCCTTCGCCAGGTAATAGAGAAACAGGATATTATGCGCCAGAAGTAACCAACGCACGTAAAGCAACACATTCGTCTGATGTATACAGTTTTGGTGTACTATTACTTGAGCTTCTAACTAGGAAAACCCCTATATATTATTCTTCAGAACGTGGCCAAGCTTTTCACTTGGTTAGATGGGTGAAGTCTGTGGTAAGAGAGGAATGGACTTCAGAGGTTTTTGATGTGGAGCTTTTGAGGTATTCAAATATAGAGGAAGAAATGGTGATGATGCTACAAATAGGGATGGCTTGTGCAGCAAGAAGGCCAGATCAAAGACCAAAAATGGCTGAAGTTGTGAGACTGATAGAAGGGATTCATCTAGAAAATCGATCGCCGTCTACTGAGTCTAGATCAGAAGCTTCTGCTACAACTATTTATTCAACTTAA 1854 0.3937 MDKNLFLLFMFSAVLVSVEAEPIEDKQALLDFLNKMNHSPHLNWDENSSVCQTWRGVTCNTDQSRVIAIRLPGAGLSGPIPPNTLTRLSALETVSLRLNGITGFFPDDFSELKNLTSLYLQSNKFSGPLPLDFSVWSNLSVVNLSNNSFNGSIPFSLSNLTHLSSLVLANNSLSGVIPDLNISSLQLLNLENNNLSGVVPKSLIRFPSWAFSGNNLTSNTSTLPPAFPMHPPYTFPPKKTKGLSETALLGIIIGVCALGFAVIAVVMILCCYDFAASGVKESVISKKKEVSMKAESSASRDKNKIVFFEDCNLAFDLEDLLRASAEILGKGTFGTTYKAALEDATTVAVKRLKEVTVGKREFEQQMEVVGKIKHENVDTLRAYYYSKDEKLVVSDYYQQGSVSSILHGKRGEGRTSIDWYSRLRIAIGTARGIAHIHTQQGGKLVHGNIKASNIFINSQGYGCVSDIGLTTLMSSIPSPGNRETGYYAPEVTNARKATHSSDVYSFGVLLLELLTRKTPIYYSSERGQAFHLVRWVKSVVREEWTSEVFDVELLRYSNIEEEMVMMLQIGMACAARRPDQRPKMAEVVRLIEGIHLENRSPSTESRSEASATTIYST* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5369 617 PANTHER OS05G0588300 PROTEIN 7 612 - -
Tpr2g5369 617 ProSiteProfiles Protein kinase domain profile. 322 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5369 617 SUPERFAMILY L domain-like 40 209 - -
Tpr2g5369 617 ProSitePatterns Protein kinases ATP-binding region signature. 328 359 IPR017441 GO:0005524
Tpr2g5369 617 PANTHER LRR RECEPTOR-LIKE KINASE 7 612 - -
Tpr2g5369 617 Gene3D Phosphorylase Kinase; domain 1 286 396 - -
Tpr2g5369 617 Pfam Leucine rich repeat 80 125 IPR001611 GO:0005515
Tpr2g5369 617 Gene3D Transferase(Phosphotransferase) domain 1 397 615 - -
Tpr2g5369 617 Pfam Protein tyrosine and serine/threonine kinase 326 589 IPR001245 GO:0004672|GO:0006468
Tpr2g5369 617 Gene3D Ribonuclease Inhibitor 23 231 IPR032675 -
Tpr2g5369 617 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Tpr2g5369 617 SUPERFAMILY Protein kinase-like (PK-like) 326 591 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5369 Tpr-Chr2 60527079 60536001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5369 14 608 Receptor kinase-like Gene Family AT4G23740 57.331 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr2g5369 PK_Tyr_Ser-Thr 4.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5369 - - gmx:100813065 886.33