Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5363 ATGGAAGATTCAAAGAACTTAATACAAGAGCTACTACAAGGAATGGAGTTGGCAAGACAGCTTCGAATCTATCTCAATGTCTCTTCTTCTTCTTCCAATGAAACACGTGAAATTTTGATAGGGAAAATCATATCCACATTTGAAAAAGCAATTGAAATGGTGAACCACAAAGGACATGTTAATGTTGGTGAATCATCACAACAACAACAGCAACATACCTCAGGGACAGTTGCAATTCGAATGTTTGATTCACCACCTTTGAGCTCTAGTCCAAGAAGTGAAGACTCTGACAGAGATCACAACACTCCTAGAAAAAGAAACACTCTACCAATTAGATGGACAAAACAAATCCGAGTTTCACCGGGAATGGCAGTCGAAGGGCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAAAAAGACATTCTTGGAGCCATACATCCAAGAGGCTATTACAGATGCACTCATAGAAATGTTCAAGGTTGTTTGGCAACAAAACAAGTACAAAGATCCGATGAAGATCCAACAATCATCGAAATCACTTACCGAGGAAACCATACATGCAACATGGCTTCATTAAATCCAATTGAAAACCAAGAAACAAATATTGTAAACACAAATCCTCAAAGCTTCAATCACGAGAAACCAAACGAACAACGTTTGAACAACCTACGAACAAGTCTAAGAGTCCAAACAGAGAACCTAGATTTCCTCAACCAATCATTTGCTCCTTTAATCCATTTACCTTCAACTTCAGAACTCAAATTTGAAAACCATGTACTTGAAAGTAGCTACGCCGAAAACTTCAATTCTCCTTCGTATGTTTCACCGGCTAATTCAGGAATAGGTCACTTCTCGATGTCTCCAAGTTCAAGCGGGTTTCAAAATGTGGCTAGTGAGATGATCCCTCTTGCTACTTCTGCTGCAAATACACCAACCACTACTTTAGATTTTCCATTTGACCAATTTCAATTTGATGGCCAAAACTTCACATTTGATCACTCTCCATTTTTCCCTTGA 1023 0.3871 MEDSKNLIQELLQGMELARQLRIYLNVSSSSSNETREILIGKIISTFEKAIEMVNHKGHVNVGESSQQQQQHTSGTVAIRMFDSPPLSSSPRSEDSDRDHNTPRKRNTLPIRWTKQIRVSPGMAVEGPLDDGYSWRKYGQKDILGAIHPRGYYRCTHRNVQGCLATKQVQRSDEDPTIIEITYRGNHTCNMASLNPIENQETNIVNTNPQSFNHEKPNEQRLNNLRTSLRVQTENLDFLNQSFAPLIHLPSTSELKFENHVLESSYAENFNSPSYVSPANSGIGHFSMSPSSSGFQNVASEMIPLATSAANTPTTTLDFPFDQFQFDGQNFTFDHSPFFP* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5363 340 SUPERFAMILY WRKY DNA-binding domain 127 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g5363 340 ProSiteProfiles WRKY domain profile. 124 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g5363 340 MobiDBLite consensus disorder prediction 83 108 - -
Tpr2g5363 340 Gene3D WRKY domain 119 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g5363 340 SMART WRKY_cls 129 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g5363 340 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 336 IPR044810 GO:0003700
Tpr2g5363 340 MobiDBLite consensus disorder prediction 92 106 - -
Tpr2g5363 340 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 3 336 - -
Tpr2g5363 340 Pfam WRKY DNA -binding domain 130 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5363 Tpr-Chr2 60412208 60414738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5363 2 203 WRKY Transcription Factor Family AT5G24110 42.512 2.24e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr2g5363 WRKY 1.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5363 - - gmx:100812027 355.91