Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5355 ATGAAACATATGATTTTTCTACTTGTCACTTTCAAGATTATAAAGAAGAAGCTGAATAAGCTAAGAGAGAGTATGGGGTTTCAAACAACACATAACTCTAAGCGGGTAACACAGCCCAATTTGAAGGGAAAGGAGGATTTGCTCAGCAATGCTCAGGAACACTCTTTAATTCCAAGGACACTAAATTTCATTCCCTCCAGCTATGATTCTTGGCTGGTAAAGCACCCCTCTGCATTGAACTCATTTGATAGATTGATGAAAGCTGCCATTGGGAAGAAGATAGTTGTATTTTTAGATTATGATGGTACCTTATCACCCATTGTAAATGATCCTGATCGTGCTTTCATGTCCAATGAGATGCGTGCGGCAGTATGTGAAGTTGCTACTTATTTTCCAACAGCAATAATTAGTGGAAGAAGCAGAGAGAAGGTAAAAGATTTTGTGAAATTAAATAATTTATATTATGCTGGGAGTCATGGTATGGACATAATGGCACCATCAGGGCCGATTAAATCTTCTGATGGCAACCAATGTGACAACACTACTCTTGACACAAATGGCAATGAAGTTCCCTTTCAACCTGCCAAGAAGTTTTTGCCTGCAATTCAAGAGATACTAAGAAGATTAGAGAATGTAATAAAGGACATAGAAGGTGCAAAAATAGAAGACAATGGATTCTGCATCTCAGTTCATTTTAGGCAGGTTCATGAAAAGGATTATAACATTTTGGAAGAGAAAGTGAAGTCTGTGATTGGAAAAAATCCACTGTTCTGCTTGACTGAGGGTAAAAAGGTTTTGGAAATAAGGCCATCGATCGAATGGAACAAAGGAAATGCTGTAGAATATTTTCTAGACACATTAGGGTTAAGCAGTTCCAGCAATCTCCTTCCTGTGTATATTGGTGACGATAAAACTGATGAAGACGCTTTTAAGGTTATGCAAAAAAGAGGGCAAGGTTATCCTATTATAGTGTCTTCGACTCCAAGAGAAACAAATGCTTTGTACTCTTTGCGCGACCCTTCAGAAGTACTAATCTTCTTGTCAAGGCTAGCAAAATGGAGGAAGACATGTTCTTACTCAAGAAGGTCTCTAAGTATTATATAG 1104 0.3795 MKHMIFLLVTFKIIKKKLNKLRESMGFQTTHNSKRVTQPNLKGKEDLLSNAQEHSLIPRTLNFIPSSYDSWLVKHPSALNSFDRLMKAAIGKKIVVFLDYDGTLSPIVNDPDRAFMSNEMRAAVCEVATYFPTAIISGRSREKVKDFVKLNNLYYAGSHGMDIMAPSGPIKSSDGNQCDNTTLDTNGNEVPFQPAKKFLPAIQEILRRLENVIKDIEGAKIEDNGFCISVHFRQVHEKDYNILEEKVKSVIGKNPLFCLTEGKKVLEIRPSIEWNKGNAVEYFLDTLGLSSSSNLLPVYIGDDKTDEDAFKVMQKRGQGYPIIVSSTPRETNALYSLRDPSEVLIFLSRLAKWRKTCSYSRRSLSII* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5355 367 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 42 361 - -
Tpr2g5355 367 Coils Coil 202 222 - -
Tpr2g5355 367 Pfam Trehalose-phosphatase 97 341 IPR003337 GO:0003824|GO:0005992
Tpr2g5355 367 Gene3D - 94 174 IPR023214 -
Tpr2g5355 367 Gene3D - 183 363 IPR023214 -
Tpr2g5355 367 SUPERFAMILY HAD-like 95 354 IPR036412 -
Tpr2g5355 367 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 42 361 IPR044651 GO:0004805|GO:0005992
Tpr2g5355 367 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 96 315 IPR006379 -
Tpr2g5355 367 TIGRFAM T6PP: trehalose-phosphatase 91 352 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5355 Tpr-Chr2 60306327 60324008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5355 92 351 Trehalose Biosynthesis Gene Families AT1G70290 25.714 4.71e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5355 K01087 - gmx:100819120 543.888