Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5354 ATGATGGAGTGCAACAAAGATGAGGCAGTTCGGGCCAAAGAAATAGCGGAGAGGAAATTTTCTGAAAGGGAATATATCGGTTCAAAGAAGTTTGCTCTCAAGGCTCAAAATTTGTATCCTGATTTGGAGGATATTTCCCAGTTTTTGACTACTATTGATATTTATATATCTGCCGAGAACAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTAAGCCCCTTTGCTGATGAAGAGGCTGTTAGAAAGCAATACAGGAAGCTGGCTCTCACCCTTCACCCTGACAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCTTGGAGTTTGTTATCAGATAAGACCAAAAGACTAGAATATAACCAGAAGAGGAGTTTGAAAAACTTCCAACATACTACTCCCAACCGTGCTGGGCATCCATCCAATGTACCCACTTCAAATGGTTATTATCATTTTAAGAAGAATGCGACTTCAAACGTGAGGACTGGGAATAATAAATCTCGGGCTCCTACGGCTTCTGTCCCTCCTCTACAAAAAAAGGCTGAAACCTTTTGGACTCTCTGTAATAAGTGCCGGACACATTATGAATATCTCAGAGTTTATTTGAATCACACCCTTTTATGTCCCAACTGTAATGAAGCTTTTGTGGCTGTAGAGAGGGGTCCTCCTCCCAATGTTTTTAAGCCATCAAATTTGCCCTCCCATCAACAGCACCAGAATTCTCGACGCCATGCTGGAAGTAATAATTCAAACATTCAGTGGGGTTCCCACTCCAGAATGGCTGGTTTTGGTAGCACAGATGGATCCTCATCTGTTGCCGCTCAAGCTGCAAGTGTTGTGCAGAAAGCAAGTGAGAAAGTAAAGAGGGAAGGAGCACCATCAATTGCTGAATGGGAGAGGATTCAAATGTCTAAGAGGGCTGATGGCTCTATGAAGAAAAGGAAGACAGATGATGGTCGCATGAATGGTTTTCCAGGATATATGCAAAATCATATGGCTATGGGACATGGAGCAGCAGGTTTGGGCAGTTTCTCTGACCCAGGAAAGACTAACTTGGAGAAAGAAAGGACTTACGGTTTTTCAGGTCTTGCTGGCAAGCAGCATTACAGCATGCGAGAGTTGTCAATGTTTGAATTACGAAACATGTTGGTGGATAAGGCACGAAATGAAATTCGCAAGGAACTTGAAGAATTGAGGTTAAAGGCTGAAGCTAAGATTACTAACAAGAACAAAGAGGGTAAGAGACAAAAAAGCACATTTAATGTCAAAACAACTGGTTCAGAGAAGTATGGAGAGTCCAATGTTAATGGCAATAAGCATTTGGATGTTGATTCTTTACCTGTCACATCTGATGACGCGGATAAGAAGAGCCAAGCCTATGTTACTATCAATGTTCCGGATCCTGATTTTCACAATTTTGACTTGGATAGAGCTGAAGGTTCCTTTGCAGAGGACCAGGTCTGGGCTGCTTATGATGATGACGATGGAATGCCTAGATATTATGCTAGAATCCACAAGGTGATCTCCCTAAAGCCATTTAGAATGCGGATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGTTCTGGTTTTTATAAAACTTGTGGGGATTTCAGGACTGGCAAGCATGAAGTAACCGAATCATTAAATTCATTTTCACACAAGGTTAGATGGACAAAAGGCACCAGAGGAGTTGTCCGCATCTTTCCTGGTAAGGGGGAAGTTTGGGCACTTTATAGAAACTGGTCTCCTGATTGGAATGAACATACTCCGGATGATGTGATACACAAGTATGACATGGTGGAAGTGCTTGATGATTTCAGTGAAGAGCAAGGTATATTAGTTACTCCCCTTGTTAAGTCTACTGGCTTTAGGACAGTATTCCAAAGGCACAACGACCATAATGAGGTTAGGAGGATTCCTAAAGAAGAGATGTTTCGATTCTCTCATCAGGTTCCTAATCACTTGCTCAGTGGCCTAGAGGCTCACAATGCTCCAATAGGTTGTCGAGAGTTGGATCCAGCAGCTACTCCTTTAGACCTCCTTCAGATAGCAACCGAAGCTAATGAGGCAGCAGGTAATGTTTAG 2130 0.4258 MMECNKDEAVRAKEIAERKFSEREYIGSKKFALKAQNLYPDLEDISQFLTTIDIYISAENKVSGEMDWYGILGVSPFADEEAVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKNFQHTTPNRAGHPSNVPTSNGYYHFKKNATSNVRTGNNKSRAPTASVPPLQKKAETFWTLCNKCRTHYEYLRVYLNHTLLCPNCNEAFVAVERGPPPNVFKPSNLPSHQQHQNSRRHAGSNNSNIQWGSHSRMAGFGSTDGSSSVAAQAASVVQKASEKVKREGAPSIAEWERIQMSKRADGSMKKRKTDDGRMNGFPGYMQNHMAMGHGAAGLGSFSDPGKTNLEKERTYGFSGLAGKQHYSMRELSMFELRNMLVDKARNEIRKELEELRLKAEAKITNKNKEGKRQKSTFNVKTTGSEKYGESNVNGNKHLDVDSLPVTSDDADKKSQAYVTINVPDPDFHNFDLDRAEGSFAEDQVWAAYDDDDGMPRYYARIHKVISLKPFRMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEVTESLNSFSHKVRWTKGTRGVVRIFPGKGEVWALYRNWSPDWNEHTPDDVIHKYDMVEVLDDFSEEQGILVTPLVKSTGFRTVFQRHNDHNEVRRIPKEEMFRFSHQVPNHLLSGLEAHNAPIGCRELDPAATPLDLLQIATEANEAAGNV* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5354 709 PANTHER HEAT SHOCK PROTEIN-LIKE 2 704 - -
Tpr2g5354 709 PRINTS DnaJ domain signature 69 87 IPR001623 -
Tpr2g5354 709 PRINTS DnaJ domain signature 87 102 IPR001623 -
Tpr2g5354 709 PRINTS DnaJ domain signature 103 123 IPR001623 -
Tpr2g5354 709 SUPERFAMILY Chaperone J-domain 58 127 IPR036869 -
Tpr2g5354 709 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Tpr2g5354 709 Gene3D DnaJ domain 64 175 IPR036869 -
Tpr2g5354 709 Coils Coil 391 419 - -
Tpr2g5354 709 Pfam Domain of unknown function (DUF3444) 469 673 IPR024593 -
Tpr2g5354 709 PANTHER BNAC03G44070D PROTEIN 2 704 - -
Tpr2g5354 709 CDD DnaJ 67 120 IPR001623 -
Tpr2g5354 709 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Tpr2g5354 709 Pfam DnaJ domain 67 128 IPR001623 -
Tpr2g5354 709 SMART dnaj_3 66 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5354 Tpr-Chr2 60296795 60300766 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5354 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.624 2.84e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5354 - - mtr:MTR_3g091040 1273.84