Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5353 ATGGTATGCGGCAGGTGTATCAGTTCTATTTTTGTTCGAGCTGCAAAGAGATTGCAATTGAATCACGTTGTTGTTGGGAGAAACTGTTTAACAAGAAGATTTCATCATCCAAATCCACAATTTCTTGCTTATTATTTTCATAATAATCGTAGTGTTTTTAATAGATACATAGGGATGATGGTTGATACAGGTTCTATGTCAACAAGGGCTGGTCCCTCTGTCGATATGGTTTCACAACAAAAAGATGATGATTCTACTCCTTCTGGTTTTATTACTGGTGGATGGAAAAGTGAAGATGAAAAACTTAGCTGCGGCTTTTCAAGCTTTAGGGGGAAGAGAGTCACCATGGAGGATTTCTATGATATTAAGACATCAATCATTGATGGTCGTTCAGTGTGCTTATTTGGAATATTTGATGGTCATGGCGGTTCTCGTGCTGCTGAGTATTTGAAGGATCATTTATTTGAGAATCTCATGAAGCATCCAAAGTTTTTGACGGACACCAAATTGGCTATAAGTGAAACATATCAGCAGACTGATGCTGCATTTCTGGACTCTGAAAAAGATAATTTCCGGGATGACGGTTCTACTGCTTCAACCGCTGTTTTGGTTGATAACCATCTTTATGTTGCCAATGTCGGAGATTCTAGAACTGTAATATCAACAGCTGGAAAAGCAATTGCTCTCTCTGAGGATCATAAACCTAATAGAAGTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTGTCATGTGGGCAGGTACTTGGAGGGTTGGAGGGGTGCTAGCAATGTCTCGTGCATTTGGCAACCGTATGCTGAAGCCATTTGTAGTAGCAGAACCTGAAATCCAGGACCAGGTGATAGATGAAAATACTGAGGTGCTTGTTCTTGCAAGTGATGGAGTCTGGGATGTAGTACAGAATGAGGATGCTGTTTCTCTTGCACGTGCGGAAGATGCAGCCGAGGTAGCTGCTCGTAAGTTAACAGAAGCCGCTTTTAATCGCGGCAGTGCAGATAACATTACTTGCATTGTGGTACGATTCAATCATGAAAAAAGACACCCAGCTAATCCTGATAAAGCCGGTCCAGCTAGCAGTCAGCAGAAGTAG 1113 0.4187 MVCGRCISSIFVRAAKRLQLNHVVVGRNCLTRRFHHPNPQFLAYYFHNNRSVFNRYIGMMVDTGSMSTRAGPSVDMVSQQKDDDSTPSGFITGGWKSEDEKLSCGFSSFRGKRVTMEDFYDIKTSIIDGRSVCLFGIFDGHGGSRAAEYLKDHLFENLMKHPKFLTDTKLAISETYQQTDAAFLDSEKDNFRDDGSTASTAVLVDNHLYVANVGDSRTVISTAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKPFVVAEPEIQDQVIDENTEVLVLASDGVWDVVQNEDAVSLARAEDAAEVAARKLTEAAFNRGSADNITCIVVRFNHEKRHPANPDKAGPASSQQK* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5353 370 SMART PP2C_4 93 347 IPR001932 -
Tpr2g5353 370 PANTHER ALPHABET, ISOFORM E-RELATED 59 355 - -
Tpr2g5353 370 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 59 355 - -
Tpr2g5353 370 CDD PP2Cc 103 349 IPR001932 -
Tpr2g5353 370 MobiDBLite consensus disorder prediction 71 90 - -
Tpr2g5353 370 Pfam Protein phosphatase 2C 104 342 IPR001932 -
Tpr2g5353 370 SUPERFAMILY PP2C-like 100 351 IPR036457 -
Tpr2g5353 370 Gene3D - 94 358 IPR036457 -
Tpr2g5353 370 ProSitePatterns PPM-type phosphatase domain signature. 134 142 IPR000222 GO:0043169
Tpr2g5353 370 SMART PP2C_SIG_2 101 349 IPR001932 -
Tpr2g5353 370 ProSiteProfiles PPM-type phosphatase domain profile. 103 349 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5353 Tpr-Chr2 60288430 60294145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5353 1 353 PP2C-type Phosphatase Gene Family AT5G53140 65.565 3.37e-164 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5353 K17506 - gmx:100805795 509.99