Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5334 ATGGCACTCTGTAGAACTGGGCCATACCCAATTTTCGAGAGTAATGGCCTAGGTTACTCACATATAAATTTGTCGACAAAACTTGTTTTACCTGTCCCCCTGCGTTTCGCTGGACCGTTATCTAATGTAGGCAAGAGAAAGCACAAGGGATTATGCAGTTCATCATTACGGAGAGCTGCATCTGCTTCTTCAATGGAGTCACATAAACAGGATCCAAATACCCTTTCGGCTTGCTCGGAGGAGGAAACTGATCATGTTATAAGGTTCAAAATGTCAGACTTTAAGGTTTTAGATCATGTTAGCATTGGCCTCGGTGGACGGGCGGATGAGGTGGTTTTTGAAGGCAAGGTGAAGGATAGTGGTAGTCCTTTGTACAACACAAGAGTTATACTTCGACAGCTTTATAGTGCCCAGGCTCAGCGTCGAGGCAAACGAGCAATAGAGGTATTGAAAAAGCTGGTTCGCCGTAAACTTTTGTATCATTCTTACTCAATGCAAGTTCATGGATATATCTCTTTGCCTGCAAGTGGTGATACTGATAGCAGTTCATTTATCCTAGTCCATGGGTATCATGGTAGCTTTTCTTTGAGACACTGGCTTCAACAGTCAGATTGGCTTCAAACTTTAGAGGCCACTCTTGCACTGGACGAAGATTCTGTTAGGAAGGTAGGAGAAGACACAACTGGAGGTCCTGCGATTTCTAGGCAATTGCGAGTTATTCGAATATTGATGAGAGATCTTCTAATTGGAGTAAATTATTTGCATAGTCATGGTCTTGCCCATACAGAGTTGAGGCTGGAAAATGTGCATATAAGCCCAATAGACAGACATATCAAAGTAGGTATACTGGGAAATGCCGCTGACTTTTGCGAGGATGGTTCAAATAGTGGCTCTATAGAAAACATGGATAGGCGAAAGATGATGATTGCTTTTGACATGAGATGCGTGGGTTTCATAATGGCCAAAATGGTAATGGGAGAACTTATGGATCCTTTGATCTTTGCAAAGTTCAAATCATTCTTCACACAGGGGAATGATCCTTCATGTTTGCGACAGTTTATGTTGGAAATCCTCGGTAGAAATTCTCCATATGGAAATGCTGGCTTACAAATGCTTGATAGGAACTGGGGTGCTGGTTGGCACCTTTTATCGTTATTGCTTGCAACCAAACCTTCTCGGAGGATAAGTTGCTTGGATGCTCTAAGGCACCCATTCCTTTGTGGGCCAAGATGGCGAGTAGTCCCATCAATGGATATTATCAGATGGGGTCTAGGTTGTACTGCAATGCGTATTAGTGAGGAGTACATTTATCGTCAGCCTCAGCGCAGTAGGCTTGCCCACTTCATTGACTTAATGGAGATGTTGAATCCTCATCCAAAGCCAAAGAACTGGCTGGAGTTGCTTCCAGGCAAATGGCGTCTATTGTACTGCACAGGGAAGCATGTTGGGTTGACCCTTCGCCAACCTCCTGTCCGTGTTCTAGTTGGAGATTTGCATTTAACTGTTACAAGAGAATCAAAGTTGAAGACCAACCTTTCCTTCGTCTCTGACATTGGATTCTCAGTCATGATTGGTCAGGACTGGCCTCATGACAAAGCTGGTAAAAAAGGAAGATTGCAGGTGAATTCTTCATTTACACTAAAAGCCGGGAGACGGTTATATCTAAAGCAAGACAATACCTCAGAGAAGCTCTCCTTTCGCCCTTCCGGCAATGAGGAGGCATTAGCTCAGAAATTTACTAGCAAGAAATGGAGAAAGATAACCCCTTTCAAGGAGTTTCCATCAAGTCTCCCTGCAGCCAAGTTTGCATCAGGTGATATTGACGTGACAATGAATCTTGACGATCCTTTAAATCAAAACATGGATACTGTAAAAAATATTCTTCAAGAACTAAGAACACAAATTCCCCCTGAAATATTTGATTTGTCAAAGATTGTCTGTGGAACTTATGTGGACTCAAGACTGCTTGTTCTTCGAGGGGTTAATGGATCGGCTCTCTTATTTACAAGGTCTTTTGTGGATAGAAACAGTTCTAGTTAA 2040 0.4275 MALCRTGPYPIFESNGLGYSHINLSTKLVLPVPLRFAGPLSNVGKRKHKGLCSSSLRRAASASSMESHKQDPNTLSACSEEETDHVIRFKMSDFKVLDHVSIGLGGRADEVVFEGKVKDSGSPLYNTRVILRQLYSAQAQRRGKRAIEVLKKLVRRKLLYHSYSMQVHGYISLPASGDTDSSSFILVHGYHGSFSLRHWLQQSDWLQTLEATLALDEDSVRKVGEDTTGGPAISRQLRVIRILMRDLLIGVNYLHSHGLAHTELRLENVHISPIDRHIKVGILGNAADFCEDGSNSGSIENMDRRKMMIAFDMRCVGFIMAKMVMGELMDPLIFAKFKSFFTQGNDPSCLRQFMLEILGRNSPYGNAGLQMLDRNWGAGWHLLSLLLATKPSRRISCLDALRHPFLCGPRWRVVPSMDIIRWGLGCTAMRISEEYIYRQPQRSRLAHFIDLMEMLNPHPKPKNWLELLPGKWRLLYCTGKHVGLTLRQPPVRVLVGDLHLTVTRESKLKTNLSFVSDIGFSVMIGQDWPHDKAGKKGRLQVNSSFTLKAGRRLYLKQDNTSEKLSFRPSGNEEALAQKFTSKKWRKITPFKEFPSSLPAAKFASGDIDVTMNLDDPLNQNMDTVKNILQELRTQIPPEIFDLSKIVCGTYVDSRLLVLRGVNGSALLFTRSFVDRNSSS* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5334 679 SUPERFAMILY Protein kinase-like (PK-like) 87 418 IPR011009 -
Tpr2g5334 679 Gene3D Transferase(Phosphotransferase) domain 1 232 408 - -
Tpr2g5334 679 SMART serkin_6 94 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5334 679 ProSiteProfiles Protein kinase domain profile. 94 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5334 679 PANTHER CELL DIVISION PROTEIN KINASE 69 672 - -
Tpr2g5334 679 PANTHER PLASTID-LIPID-ASSOCIATED PROTEIN 14, CHLOROPLASTIC-RELATED 69 672 - -
Tpr2g5334 679 Pfam PAP_fibrillin 441 666 IPR006843 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Tpr2g5334 PAP_fibrillin 3.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5334 - - ccaj:109796635 1157.51