Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5321 ATGGGTAAGAAAGGAAGTAGTTGGTTTTCATCGGTGAAGAAAGTTTTCAAGTCTTCTTCTAAGGATTCTCCGGTGCCGGTGAACAAGAAGGAAAAGGAAGAGAATTGGCAGCATGAAGCAGCAGAGGAGGTATCTTTGGAACATTTTCCTGCATATAGTTCACCAGATATCACCAATGAAGGAAGTACCACCACATCAACACCAATGACTGAAGAAAGAAATCATGCTATTGCCTATGCAGTAGCAACAGCAGCAGCAGCTGAAGCTGCAGTGACAGCAGCTCAAGCAGCTGCTAGAGTTGTGAGATTGGCAGGTTATGGACGTAACTATAAGGAAGAAAAAGCAGCAATACTCATTCAATCATACTATAGAGGATACCTAGCTCGACGTGCACTGCGTGCTTTGAAGGGATTGGTGAGGCTGCAAGCACTTGTGAGGGGACATAATGTGAGGAAGCAAGCACAAATGACAATGCGGTGCATGCAAGCATTGGTAAGAGTACAGGGAAGAGTAAGAGCTAGAAGACTCCAATTGACTAATGAGAAACATCATAGGACATTGGAGGAACAACATCCTGTGACAATGTTTGACACAAGTGGTTGGGACTATAGGCGTAAAAGTAGCCACAAAATTAAGGAAAATGATTTCAGGAAACATGGAACTATAATGAATAAAGACAAAACTCTTCCATACTCTTTCAACCACCAGCAACTACAAAAGCAATATTTGCAAATAGACCCAAATGTTGATGATATTGAAAGTTATGGCAATGAACGTGAAAGAGCTCAATTGGATTGGAATTGGTTGGAACGTTGGATGTTAACACAATCACACAATGTTAGGCCTATAGGATTGGGCCCACTTGGGACCCCACCCTACACACCCACTGATGACATGTCTGAAGAAAAAACAGTTGAAATGGACATGGTCGCACCAAGAGACTCAATGCATGCAAACATGGGCCTAATGAATCAAGAATCTCATGATTTAAGCCCAATTGCTAAACACCACCAACGAAATCACAGTGGAGGTGTACCTAGCTATATGGCCCCAACCCAATCTGCAAAGGCCAAGATTCGGAGTCAAGGCCCGATAAAGCATCGGGCTTCGTTTGGGTCTTATTGGAATTCATCATTAAGGAGTCCTCCAAGTGGGCTGGGCTATGACTCATCTGGGTCTGGTGGGGCCGCCACTCATCCGATTACGAGAAGCCCAAGCCCAAAAATAAACGGAATTCGTCTTCAATCGAAACGGATTTCGGGTGTTAGCCCAGATAATGTTGGTGTTGAGGATTGGCCTAATCATCATGGAGCTCATGCTTGGGCTAGATTTGATTGA 1338 0.4395 MGKKGSSWFSSVKKVFKSSSKDSPVPVNKKEKEENWQHEAAEEVSLEHFPAYSSPDITNEGSTTTSTPMTEERNHAIAYAVATAAAAEAAVTAAQAAARVVRLAGYGRNYKEEKAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQGRVRARRLQLTNEKHHRTLEEQHPVTMFDTSGWDYRRKSSHKIKENDFRKHGTIMNKDKTLPYSFNHQQLQKQYLQIDPNVDDIESYGNERERAQLDWNWLERWMLTQSHNVRPIGLGPLGTPPYTPTDDMSEEKTVEMDMVAPRDSMHANMGLMNQESHDLSPIAKHHQRNHSGGVPSYMAPTQSAKAKIRSQGPIKHRASFGSYWNSSLRSPPSGLGYDSSGSGGAATHPITRSPSPKINGIRLQSKRISGVSPDNVGVEDWPNHHGAHAWARFD* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5321 445 MobiDBLite consensus disorder prediction 1 40 - -
Tpr2g5321 445 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Tpr2g5321 445 MobiDBLite consensus disorder prediction 24 40 - -
Tpr2g5321 445 PANTHER IQ-DOMAIN 5-RELATED 1 424 - -
Tpr2g5321 445 MobiDBLite consensus disorder prediction 385 405 - -
Tpr2g5321 445 Gene3D - 109 164 - -
Tpr2g5321 445 Pfam IQ calmodulin-binding motif 113 133 IPR000048 GO:0005515
Tpr2g5321 445 Pfam IQ calmodulin-binding motif 139 154 IPR000048 GO:0005515
Tpr2g5321 445 Pfam Protein of unknown function (DUF4005) 331 368 IPR025064 -
Tpr2g5321 445 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Tpr2g5321 445 PANTHER IQ-DOMAIN 21 1 424 - -
Tpr2g5321 445 SMART iq_5 134 155 IPR000048 GO:0005515
Tpr2g5321 445 SMART iq_5 111 133 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5321 Tpr-Chr2 59920334 59925527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5321 1 436 IQD Protein Family AT3G49260 44.979 2.69e-88 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5321 - - aprc:113873497 499.975