Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5314 ATGGATTTCTTTGCAAAACCTGAAACCTCCTACTGGTTTTGTAACGATCAATCTCAACAAAACGACACAGACAAAATCATGGATATTACACCATATGATGATTTCGTCAACATTGATTGGGCAAATCATTTTTCATACCAAAGTAACAAACTTTTTCTCAATGAGTTCCATGATCTTGAAAATTTCAACTTTGATTTCAACCTTCCAAACCTTGATGAAAATCTTGAGGTAGAACAAAAACCCACCAATGTTGTTTTTCCTGAATTGGTTCATAATACTGAAAAAGTTGAAAGTGTTTGTGAAAGTGCTTTTTCTGAAACTTCAGAGAAAGTTGGAAAAGGTTTAATGAGTTTTGTGAAGAAAGAGGAGGAATGGGAGAATCAAGATTCACCATTAATCCCTTTGACATTGCCTAGTAGTAATGTCATTATGAAAAAGAAGTCATCTTTATTACAATTTGATGAGATTAAGGAACATTTTGATGTTCCTATAACAATGGCTGCTAAGAAAATGAATATTGGGGTTACCCTTTTGAAGAGGAGGTGTAGGGAACTCAATATCAATAGGTGGCCTCACAGAAAATTGAAGAGCTTGATGCTCCTCATTGACAACCTTAAGGAAATGGGTTTGGAAGATGAGGTTGCAATGTTGGAGAAGGAAAAAAAGATGTTGGAGGAAATACCAGGAATGGAATTGAATGCAGAAATCAAGAAATTAAGGCAATCATTTTTTAAAGCTAATTACAAGAAGAGAAGATCAAATACTTTCCATCCTTAA 777 0.3423 MDFFAKPETSYWFCNDQSQQNDTDKIMDITPYDDFVNIDWANHFSYQSNKLFLNEFHDLENFNFDFNLPNLDENLEVEQKPTNVVFPELVHNTEKVESVCESAFSETSEKVGKGLMSFVKKEEEWENQDSPLIPLTLPSSNVIMKKKSSLLQFDEIKEHFDVPITMAAKKMNIGVTLLKRRCRELNINRWPHRKLKSLMLLIDNLKEMGLEDEVAMLEKEKKMLEEIPGMELNAEIKKLRQSFFKANYKKRRSNTFHP* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5314 258 Coils Coil 207 227 - -
Tpr2g5314 258 PANTHER PROTEIN RKD4 37 253 IPR044607 GO:0003700
Tpr2g5314 258 ProSiteProfiles RWP-RK domain profile. 138 219 IPR003035 -
Tpr2g5314 258 PANTHER PROTEIN RKD1-RELATED 37 253 - -
Tpr2g5314 258 Pfam RWP-RK domain 151 198 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5314 Tpr-Chr2 59850063 59851518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5314 151 253 AtRKD Transcription Factor Family AT5G53040 58.252 8.72e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Tpr2g5314 RWP-RK 1.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5314 - - aprc:113850801 203.371