Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5306 ATGGCGTTATCAACTCCACAGATACAAAGATTTCTTTTAACCAAACTCCATAGACGTTACTCCACCTCTTCCAAATCCAACAACTTAAACAGAAACAGAAACAGAAACAGAAACATCTTCAACAGCAGAAGAAGTCGTTGCTACTCTGCCATAGCCATTGATGCACCTTCATCATTGACAGATTCACCTCCTATTAGATGGGGTTCTGTTTCTTTGCAGGGTCCTCGTGAAGAAATGGAAGATGATATTATTCTCAGACCTGATAGTCTTCAAGGTTTTTCTTTTGCTGCTGTTTTTGATGGTCATGGAGGCTTTGCTTCTGTCCAGTTTCTCAGGGAAGAGCTATACAAGGAGTGTCTTGAAGCTCTACAAGATGGATTACTATTGCTCGGGAAAGATTTCAAAGCTGTTGAAGACGCATTAAAACAGGCATTTGCTAAGGCTGACATGAAGTTGTTAAAATGGCTTGAAATCAAAGGGGAGGAGGAGGATGAATCAGGTGCTACCGCCACTGCCATATTCCTAGGAGATAATAAGCTGCTAATTTCACATATTGGCGACTCATCTGTGGTTTTATGCAGATCTGGAAAACCTGAATTGCTGACTAGTCCTCACCGTCCCTATGGGAGCAACAAGGCTTCTCTTGAAGAAATCAAAAGAATCAGAGAAGCAGGTGGATGGATTGTCAACGGTAGGATTTGTGGAGATATTGCGGTATCTCGTGCATTTGGGGACATTCGATTCAAAACGAAGAAGAATGAGATGCTACGAAAAGGAGTTGAGGAAGGAAGATGGACAGAAAAATACATTTCTCGTATACAGTTCAAAGATGACCTGGTTGTCGCACGCCCTGATATTTATCAAGTAACTCTTGCCTCAGATGCAGAATTTATAGTGTTAGCATCCGATGGCTTATGGGATTACATGAGCAGTTTAGACGCAGTTACTTTTGTGAGGGATCAACTACGAAAACATGGAAACACGCAGCTAGCTTGTGAATCCCTTGCACAAGTGGTTTTGGACCAACGTACACAGGATAATGTCAGCATTATAATTGCCGATCTAGGGAAGACAGACTGGAAGAATCTTCCACTGCAGCAACAAAATGTGATATTTGAGCTAGTCCAAGCCCTTGCCACAATTGGAATTGTGTCTGTTGGAATCTGGTTTACATCACAGCTTTCTTTATAG 1191 0.419 MALSTPQIQRFLLTKLHRRYSTSSKSNNLNRNRNRNRNIFNSRRSRCYSAIAIDAPSSLTDSPPIRWGSVSLQGPREEMEDDIILRPDSLQGFSFAAVFDGHGGFASVQFLREELYKECLEALQDGLLLLGKDFKAVEDALKQAFAKADMKLLKWLEIKGEEEDESGATATAIFLGDNKLLISHIGDSSVVLCRSGKPELLTSPHRPYGSNKASLEEIKRIREAGGWIVNGRICGDIAVSRAFGDIRFKTKKNEMLRKGVEEGRWTEKYISRIQFKDDLVVARPDIYQVTLASDAEFIVLASDGLWDYMSSLDAVTFVRDQLRKHGNTQLACESLAQVVLDQRTQDNVSIIIADLGKTDWKNLPLQQQNVIFELVQALATIGIVSVGIWFTSQLSL* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5306 396 Gene3D - 65 362 IPR036457 -
Tpr2g5306 396 PANTHER PROTEIN PHOSPHATASE 2C 57 7 392 - -
Tpr2g5306 396 SMART PP2C_4 56 353 IPR001932 -
Tpr2g5306 396 Pfam Protein phosphatase 2C 68 348 IPR001932 -
Tpr2g5306 396 PANTHER PROTEIN PHOSPHATASE 2C 7 392 IPR015655 GO:0004722|GO:0006470
Tpr2g5306 396 CDD PP2Cc 65 355 IPR001932 -
Tpr2g5306 396 SUPERFAMILY PP2C-like 60 356 IPR036457 -
Tpr2g5306 396 ProSitePatterns PPM-type phosphatase domain signature. 95 103 IPR000222 GO:0043169
Tpr2g5306 396 ProSiteProfiles PPM-type phosphatase domain profile. 66 355 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5306 Tpr-Chr2 59788693 59792906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5306 1 332 PP2C-type Phosphatase Gene Family AT4G27800 61.862 8.63e-149 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5306 K04457 - vra:106776113 570.081