Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5301 ATGAAGCCAAACAATTTTCCCAACTGCATCCGTACAGAGAATTACATGATTACTTTTGAAGTTGAAGAAGAAAAGTTTGGGCCAGCAAAAATTGTGGGACCTACTCAGTTTATTCAACCTGACAAAAGGAGAGTGATCCAAGCACTCATGACATGGAATGTTACGTGCCTGTATTCACAATTTTTGGCTCAGAAAACTCCCACTTGCTGCGTCTCCCTCTCAGCTTTTTACAACGAAACCATTGTATCCTGCCCAACTTGTGCATGCGGCTGTCAGAGTAACTCATCTCAGTCAGGGAGTTGTGTAAATCCAAATACGCCACATTTGGCCTCGGTTGTTGCTGGTAGTAACGGAAAGAATAATTTATCACCTTTGGTGCAATGTACCAGCCACATGTGCCCAATCCAAATCCATTGGCATGTCAAAGTTAACTACAAGGAATACTGGCGTGTGAAGGTTTCTATAACTAATTTTAATTACCGTATGAATTACTCAGATTGGAACTTGGTAGTTCAGCATCCGAACTTCAATAATCTGACTCAGTTATTCAGTTTGAACTACAAGTCATTAAATCCTTATGGTTCAATAAGTATTATCCGGACTTGTTTAATTCATGTTTCTTTAGTATTGGATTTCTTAATTACTGGTATGAGTTGGTTTTAA 663 0.3891 MKPNNFPNCIRTENYMITFEVEEEKFGPAKIVGPTQFIQPDKRRVIQALMTWNVTCLYSQFLAQKTPTCCVSLSAFYNETIVSCPTCACGCQSNSSQSGSCVNPNTPHLASVVAGSNGKNNLSPLVQCTSHMCPIQIHWHVKVNYKEYWRVKVSITNFNYRMNYSDWNLVVQHPNFNNLTQLFSLNYKSLNPYGSISIIRTCLIHVSLVLDFLITGMSWF* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5301 220 Pfam COBRA-like protein 8 59 IPR006918 GO:0010215|GO:0031225
Tpr2g5301 220 PANTHER COBRA-LIKE PROTEIN 26 212 - -
Tpr2g5301 220 PANTHER PROTEIN COBRA 26 212 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5301 Tpr-Chr2 59751466 59753319 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5301 27 213 COBRA Gene Family AT5G60920 67.021 5.27e-92 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5301 - - pvu:PHAVU_008G029100g 305.064