Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g5300 | ATGAACCTTTTCACTACTAACAATCCATCATTCCCCGCTGGGCTTAGAGTACTTGCAGTCGATCATGACACCTACGATCTCTACACTATTCACCACATTTGTAATCAATTACACTATCAAGTTACAACATGCAGTACCACTTCTCAAGCGACGCATTTCTTGTCCCGACAACATTTCGACATCATTGTCATCGAAACTCATATTCCACAACAAGATACTTATGGATTTGTTCAACAAGTGACTTCACATTTGAAAATTCCAGTGATTATGATGTCGCTTGATAACCGAACCTGTTCTGTTATGGATTCCATTTCCAACGGGGCTTGTAGTTACTGGGCCAAACCACTGGATGAAAATCTATTCAAAAATATGTGGCAACATGTCGTGCGGCAACATCTAGTGCAAAAGGAAAGCGAGGCTAAAGGGCTTAAAAAGCTAGGAAGAGAACATCTAGTGCAAAAGGAAAGCGAGGCTAAAGGGCTTAAAAAGCGAGGAAGAGATGATGAGGTTCATGTTTCTAAACAACCTCTGGCAAAGAAAGCTCGTTTCTCTTGGACAGATGATTTGCACCAAAAATTTGTGTCGGTCGTGAATCATCTTGGGATTAAAAATGCAAAGCCTAAAAAAGTTCTGAAGATCATGGATTGTCCTGGCTTGGAATTACAGCATGTAGCTAGTCATTTGCAGAAATATAAAATGTATTTAGATGGTGGGATAAAAAATTCAAAGATGAATCAGAAGAACAATGAAACACAAGCACAGGATCAATGTCATGATAATTGGACAGAAATTGATGAAACCGAAGTATTTTTTAGCTTGACTGATTTTTCCCCCGATCTTAACGATGATATACACAATAACAACTATGCTGTTTCAGCTGAGAGCATTGATTCCCCTAGCACCTCTCTTCCACAGCTTGGGCAATATTCAATGACACCACCTGATCAATGTGACGATTCCGACATATTTTTTAACTTGACCGATTTATTCCCCAATCTTAACGATGAGTTACACAATGGGATATGGTGA | 1029 | 0.3926 | MNLFTTNNPSFPAGLRVLAVDHDTYDLYTIHHICNQLHYQVTTCSTTSQATHFLSRQHFDIIVIETHIPQQDTYGFVQQVTSHLKIPVIMMSLDNRTCSVMDSISNGACSYWAKPLDENLFKNMWQHVVRQHLVQKESEAKGLKKLGREHLVQKESEAKGLKKRGRDDEVHVSKQPLAKKARFSWTDDLHQKFVSVVNHLGIKNAKPKKVLKIMDCPGLELQHVASHLQKYKMYLDGGIKNSKMNQKNNETQAQDQCHDNWTEIDETEVFFSLTDFSPDLNDDIHNNNYAVSAESIDSPSTSLPQLGQYSMTPPDQCDDSDIFFNLTDLFPNLNDELHNGIW* | 343 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g5300 | 342 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 11 | 262 | IPR045279 | GO:0009736 | |
Tpr2g5300 | 342 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 180 | 232 | IPR006447 | GO:0003677 | |
Tpr2g5300 | 342 | Gene3D | - | 12 | 138 | - | - | |
Tpr2g5300 | 342 | Gene3D | - | 177 | 237 | - | - | |
Tpr2g5300 | 342 | SUPERFAMILY | Homeodomain-like | 178 | 235 | IPR009057 | - | |
Tpr2g5300 | 342 | MobiDBLite | consensus disorder prediction | 154 | 173 | - | - | |
Tpr2g5300 | 342 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR14 | 11 | 262 | - | - | |
Tpr2g5300 | 342 | Pfam | Response regulator receiver domain | 17 | 121 | IPR001789 | GO:0000160 | |
Tpr2g5300 | 342 | ProSiteProfiles | Response regulatory domain profile. | 16 | 129 | IPR001789 | GO:0000160 | |
Tpr2g5300 | 342 | SUPERFAMILY | CheY-like | 14 | 138 | IPR011006 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g5300 | Tpr-Chr2 | 59744654 | 59746956 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g5300 | 11 | 250 | Response Regulator Gene Family | AT2G25180 | 33.725 | 1.06e-38 | 143 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Tpr2g5300 | Response_reg | 7.9e-09 | CL0304 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g5300 | - | K14491 | mtr:MTR_4g021760 | 228.794 |