Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5276 ATGCATTTTTTGATTGTGTACGCGGTTAAGGCAGTGGTGGGTTACTATGTATTGACAACGGGGCTCCAATATCTTGACCCGAACCGTGAAACATCGAAGAAGGCTCATGAGCAGAAGAAAGAGATTGCAAAGCGTCTAGGTCGTCCCCTCGTTCAAACCAATTCTTACGAGGATGTGATTTCATGTGATGTTATAAATCCTGACAACATTAATGTGGAATTTGACTCCATTGGGGGACTTGAAACTATTAAACAAGCTTTGTTTGAGCTTGTTATTTTACCCCTTAAGCGGCCCGACTTGTTTTCGCATGGTAAGCTCCTTGGACCACAAAAGGGGGTCTTGTTGTATGGACCTCCTGGCACTGGAAAAACTACACTTGCAAAAGCTATTGCCAAGGAGTCTGGAGCAGTATTCATTAATGTCAAGATATCCAACCTCATGAGCAAATGGTTCGGGGATGCCCAAAAGCTCGTGGCTGCCGTATTTAGCTTGGCTGATAAGCTTCAGCCTGCCATCATATTCATTGATGAAGTAGACAGTTTTTTGGGTAAACGACGTACATCAGATGACGAGGCTATGTTAAGCATGAAAACGGAGTTCATGGCTCTATGGGACGGATTCACCACCAACAAGAATGCTCAGGTTATGGTGCTTGCAGCAACTAATCGTCCTGCAGAACTTGATGAAGCAATACTCAGGCGGTTTCCTCATGCTTTTGAAATTGGATATCCAAACCAAAGAGAGAGGGCTGAGATATTGAAGGTTATCTTAAAGGGGGAGAGGGTTAAAGATAAAATAGACTTCGGTTATATAGCTGGGTTATGTAAGGGTTACACTGGTTCAGATTTATTTGATCTTTGCAAGAAGGCTGCATATTTTCCTATTAGAGAACTACTGGATGATGAGAAGAAAGGGAAACAAACCTGTGAACCTAGACCTTTGTCGCAATTAGATTTGAAGAAGGCCCTTTCAACTTCACGGAAGACAACTGTTGCTGCAAATGAATACAGTAGAATGAACCCCCGGATCCTTAAAATTTTGAGTTTCTTTTTTTGTTTGTTTTTGTTTTGTTTTTGGTTTACAAAATATTTATCTTAG 1098 0.4144 MHFLIVYAVKAVVGYYVLTTGLQYLDPNRETSKKAHEQKKEIAKRLGRPLVQTNSYEDVISCDVINPDNINVEFDSIGGLETIKQALFELVILPLKRPDLFSHGKLLGPQKGVLLYGPPGTGKTTLAKAIAKESGAVFINVKISNLMSKWFGDAQKLVAAVFSLADKLQPAIIFIDEVDSFLGKRRTSDDEAMLSMKTEFMALWDGFTTNKNAQVMVLAATNRPAELDEAILRRFPHAFEIGYPNQRERAEILKVILKGERVKDKIDFGYIAGLCKGYTGSDLFDLCKKAAYFPIRELLDDEKKGKQTCEPRPLSQLDLKKALSTSRKTTVAANEYSRMNPRILKILSFFFCLFLFCFWFTKYLS* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5276 365 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 4 331 - -
Tpr2g5276 365 Pfam ATPase family associated with various cellular activities (AAA) 113 242 IPR003959 GO:0005524|GO:0016887
Tpr2g5276 365 Pfam AAA+ lid domain 266 300 IPR041569 -
Tpr2g5276 365 Gene3D - 71 332 IPR027417 -
Tpr2g5276 365 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 4 331 - -
Tpr2g5276 365 Gene3D - 244 326 - -
Tpr2g5276 365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 300 IPR027417 -
Tpr2g5276 365 CDD AAA 107 243 - -
Tpr2g5276 365 SMART AAA_5 109 245 IPR003593 -
Tpr2g5276 365 ProSitePatterns AAA-protein family signature. 215 234 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5276 Tpr-Chr2 59410097 59415359 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5276 72 303 Calmodulin-binding Proteins AT3G56690 36.555 4.55e-40 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5276 K22530 - gmx:100796908 554.288