Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5274 ATGGGTTCATCAGATACGAAGCTCCTTCAAGATATTTTGTTATACGCGGCAAGCGCTGCATTGAGTTGCTTGGTATTGGTAACCGGGTTGCACTACTTAGACCCGAACCGTGAATCTTCAAAGAAGGCTCTTGAACATAAGAAAGAGATTGCAAAGCGTTTAGGTCGTCCCCTTATTAATACAAATTCTTATGAGGATGTAATAGCCTGTGATGTAATAAATCCTGACCACATTGACGTAGAGTTTGACTCCATCGGGGGACTGGCAACCATTAAAGAAGCTTTATTTGAGCTTGTGATTCTTCCCCTGAAGCGACCTGACTTGTTTTCGTATGGAAAACTCCTTGGACCTCAAAAGGGGGTCCTGTTGTACGGACCCCCTGGCACGGGGAAAACCATGCTTGCCAAAGCTATTGCCAAAGAGTCAGGAGCAGTTTTCATTAATGTGAGGATATCCAACCTGATGAGCAAATGGTTCGGAGATGCTCAAAAGCTTGTGACTGCTGTATTTAGCTTGGCTCATAAGCTTCAGCCTGCCATCATATTCATTGACGAAGTTGACAGTTTTTTGGGTCAACGTCGTCAATCAGATCATGAGGCTTTGTTAAACATGAAAACTGAGTTCATGGCTCTATGGGATGGATTCACTACCGACCAGAATGCCCGAGTTATGGTACTTGCAGCAACTAATCGTCCTTCAGAACTTGATGAAGCAATACTTCGGCGTTTTCCTCAAGCCTTTGAAATTGGAATGCCAAACCAGAAGGAAAGGGCCGAGATATTGAAGATTATCTTAAAGGATGAGAAGGTTGAAGATAACATAGACTTTGGTTCTATAGCTAAATCATGTAAGGGTTACACTGGATCAGATCTATTTGATCTTTGCAAAAAGGCCGCCTATTTTCCGATTAGAGAACTGCTGGATTACGAGAAGAAAGGGAAACAATCTCCTGAACAGGAACCTAGACCTTTGTCACAGTTAGATTTGGAGAAGGCCCTTTCCACTTCACGGAAGACAACGGTTGCTGCAAATGAATACTGCAGAATGAACCAACCGTCATCATCTGGCGATTCAGAGTAA 1080 0.4324 MGSSDTKLLQDILLYAASAALSCLVLVTGLHYLDPNRESSKKALEHKKEIAKRLGRPLINTNSYEDVIACDVINPDHIDVEFDSIGGLATIKEALFELVILPLKRPDLFSYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVTAVFSLAHKLQPAIIFIDEVDSFLGQRRQSDHEALLNMKTEFMALWDGFTTDQNARVMVLAATNRPSELDEAILRRFPQAFEIGMPNQKERAEILKIILKDEKVEDNIDFGSIAKSCKGYTGSDLFDLCKKAAYFPIRELLDYEKKGKQSPEQEPRPLSQLDLEKALSTSRKTTVAANEYCRMNQPSSSGDSE* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5274 359 Gene3D - 79 340 IPR027417 -
Tpr2g5274 359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 309 IPR027417 -
Tpr2g5274 359 CDD AAA 115 250 - -
Tpr2g5274 359 Pfam ATPase family associated with various cellular activities (AAA) 121 250 IPR003959 GO:0005524|GO:0016887
Tpr2g5274 359 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 2 356 - -
Tpr2g5274 359 Pfam AAA+ lid domain 273 308 IPR041569 -
Tpr2g5274 359 ProSitePatterns AAA-protein family signature. 223 242 IPR003960 GO:0005524|GO:0016887
Tpr2g5274 359 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 2 356 - -
Tpr2g5274 359 Gene3D - 252 334 - -
Tpr2g5274 359 SMART AAA_5 117 257 IPR003593 -
Tpr2g5274 359 MobiDBLite consensus disorder prediction 312 338 - -
Tpr2g5274 359 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5274 Tpr-Chr2 59393233 59399645 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5274 31 320 Calmodulin-binding Proteins AT3G56690 31.633 9.39e-38 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5274 K22530 - gmx:100796908 594.734