Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5263 ATGGGTCATTGCTGCAGCAAAATTGCTGTCGACAACGAAACAATCACCACCGATCACAACCACAAACCACCACCTAATCACGCACCATCACCGTTTTCTCAACCTATTTCCACCGTTAGCGATGCTACACCAGGAAGACAAACTCCGGCGACATCTTTCTCCACAAGTCCTTTCAATAGTCCTCTTCCTGCAGGTGTTATGCCGTCTCCGGCTACCAAGACTCCTGGTAGGAAATTCAGGTGGCCACTTCCTCCACCGTCTCCGGCAAAGCCGATTATGGCGGCTTTGATGAGACGGCAAGGGAAGACGAAACCGAAAGATGGACCGATACCGGAGGAACAAGGTGGGGAAGGTGGTGGAGATGGAGAGAGAACGTTGGATAAGAGTTTTGGATATGGGAAGAATTTTGGGGCCAAATTTGAGCTTGGTAAGGAAGTTGGTCGAGGGCATTTTGGTCATACTTGTTGGGCTAAAGGGAAGAAAGGTGAACTTAAGGGAGTATCAGTTGCTGTCAAAATCATTACCAAAGCTAAGATGACTTCGGCAATAGCAATTGAAGATGTGAGGAGGGAGGTGAAAATGTTGAAGGCCTTATCTGGACATAGGAATTTGGTCAAGTTTTATGATGCATTTGAGGATGCGAACAACGTCTACATTGTGATGGAGTTGTGCGAGGGCGGAGAATTACTGGACAGAATTCTAGATAGAGGTGGAAGATACCCAGAGGATGATGCCAAAGTTATTCTTCTACAAATTCTGAATGTAGTTGCCTTTTGTCATCTTCAGGGAGTTGTTCATCGCGATCTAAAACCAGAGAATTTTCTTTTTGTCTCAAAAGATGAGGATGCTGTTTTGAAAGTTATTGACTTTGGTCTATCTGATTTTGTTAGGCCAGATCAACGCCTCAATGATATTGTTGGTAGTGCCTACTATGTTGCACCTGAAGTGCTCCATAGATCGTATAGTGTTGAAGGAGACTTATGGAGTATTGGAGTTATAACTTACATATTGTTATGTGGAAGTAGGCCGTTTTGGGCACGGTCTGAATCAGGAATCTTCCGGTCTGTGTTAAGAGCAAATCCTAACTTTGATGATTCACCTTGGCCATCAATATCACCAGAAGCTAAAGACTTCGTGAAGAGACTTTTGAACAAAGACCACAGAAAAAGAATGACTGCTGCTCAAGCTTTATCTCACCCGTGGTTGAGAGATGAAAAAAATGCCATTCCTTTAGATATTTTGATTTACAAGTTAGTCAAGTCATATGTGCGTGCCTCACCTTTGAAGCGTGCAGCGTTGAAGGCTCTCTCAAAAGCATTGCCAGATGAAGAGCTTACCTACCTTAGAGCACAATTTAGCCTCTTGGAACCTAGAGATGGTTTTGTTTCACTCGAGAATTTCACAGTTGCTCTAATGAAAAATGCAACTGATGCCATGAAGGAAGCAAGGGTCCCTGACATTCTAAATTTGATGGATCCGCTCTCCTATAAAAGATTGGACTTCGAAGAGTTTTGCGCTGCTGCAATAAGTGTATACCAGCTGGAAGTTCATCCAGATTGGGATAAAATTGCCACCGCAGCTTTTGATTATTTTGACGAGGAAGGGAACCGTGTCATTTCACTCGAGGAGTTGGCACAGGAGATGAATTTGGGGCCTTCTGCTTACTCTTTAATGGGTGATTGGATCAGAAAATCCGATGGAAAACTCAGTTTGGTCGGATATACGAAGTATTTGCATGGAGTCACAATTCGTAGTTCAAATACAAGACACAGATAG 1776 0.4352 MGHCCSKIAVDNETITTDHNHKPPPNHAPSPFSQPISTVSDATPGRQTPATSFSTSPFNSPLPAGVMPSPATKTPGRKFRWPLPPPSPAKPIMAALMRRQGKTKPKDGPIPEEQGGEGGGDGERTLDKSFGYGKNFGAKFELGKEVGRGHFGHTCWAKGKKGELKGVSVAVKIITKAKMTSAIAIEDVRREVKMLKALSGHRNLVKFYDAFEDANNVYIVMELCEGGELLDRILDRGGRYPEDDAKVILLQILNVVAFCHLQGVVHRDLKPENFLFVSKDEDAVLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEGDLWSIGVITYILLCGSRPFWARSESGIFRSVLRANPNFDDSPWPSISPEAKDFVKRLLNKDHRKRMTAAQALSHPWLRDEKNAIPLDILIYKLVKSYVRASPLKRAALKALSKALPDEELTYLRAQFSLLEPRDGFVSLENFTVALMKNATDAMKEARVPDILNLMDPLSYKRLDFEEFCAAAISVYQLEVHPDWDKIATAAFDYFDEEGNRVISLEELAQEMNLGPSAYSLMGDWIRKSDGKLSLVGYTKYLHGVTIRSSNTRHR* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5263 591 SUPERFAMILY Protein kinase-like (PK-like) 139 426 IPR011009 -
Tpr2g5263 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Tpr2g5263 591 ProSiteProfiles Protein kinase domain profile. 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5263 591 ProSitePatterns Protein kinases ATP-binding region signature. 146 172 IPR017441 GO:0005524
Tpr2g5263 591 Gene3D - 420 549 - -
Tpr2g5263 591 Gene3D Transferase(Phosphotransferase) domain 1 230 419 - -
Tpr2g5263 591 PANTHER SERINE/THREONINE-PROTEIN KINASE 46 585 - -
Tpr2g5263 591 CDD STKc_CAMK 139 401 - -
Tpr2g5263 591 SUPERFAMILY EF-hand 435 579 IPR011992 -
Tpr2g5263 591 MobiDBLite consensus disorder prediction 100 124 - -
Tpr2g5263 591 Gene3D - 441 509 - -
Tpr2g5263 591 MobiDBLite consensus disorder prediction 32 62 - -
Tpr2g5263 591 MobiDBLite consensus disorder prediction 15 124 - -
Tpr2g5263 591 Pfam Protein kinase domain 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5263 591 SMART serkin_6 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5263 591 Gene3D Phosphorylase Kinase; domain 1 134 229 - -
Tpr2g5263 591 PANTHER CDPK-RELATED KINASE 3-LIKE ISOFORM X1 46 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5263 Tpr-Chr2 59258046 59265558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5263 1 585 EF-hand Containing Proteins AT3G50530 57.524 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tpr2g5263 Pkinase 1.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5263 - - var:108331904 1009.21