Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5258 ATGGCGATAGCAGCACTATCCATTTTCTCAAATTCTCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACAACAACCTTTCATCCCTACCCATCAAACCCTTCACATTCTCTTCAACCCACAACCTTTTCCCCTCCTCTTCAAACTCAACCTTCCTTTTCCCTCCTCACCAAATCACACCCACCAAACAACTACTTTTCCAGCTTCCGTTTTCGACCCTCCATTCACTCATTCTTCCGCTGCCGCAGCAGTAGCAACGCCCCCAATGTCGACGTCCAATTCGGGACAGCTATCTCTTTATTTCAAGAAATTGGTATTAGCTTTGAGGAAACCAAATTGCTCTTGCTCAAATCCAATGAACTTACCTCTATACAACTTGATTCATTGCGTGATCGCGTTCTTTCTTTACACTCTCTCGGGTTAGACCGTGTTTCAATCAATCATTTTGTTACCAACCGTTTAACTGTGCTAACAACTAATGAAATTGACCCATTGTTGAGTTTTTTGAGAAATGAATTACATGGACAACTTGCGCAAGCAAAGCTCAAGCGTCTTTTATTGAGTAATGAACCAAAAAATTTATCCTCGTTTCCTCAGAAGGTTCGATTGCTTGTTGACCGAGGAATGCCGGTTGACAAGATTGTAGGTGTGCTTAACAAAGTGAATTTGTCAAAGGCAATTTGTAATAGGTCAATCAATGAAATTGAAAGAATTATAGATTTCTTAGAACCTTTTGGTGGTGTTAATTTGATTGTGAAACACCCTGCAATTCTCAATCATTGTTTGGATTCTAAGCTTATTCCTAGAATCAGTGTTCTTACTAAGTTAAGTGGTGGAGATGAGGATGGTATTAGGATAGTGTTGAATAGGTTTCCTTTTATCTTGAATTATACTGTGGAACATGTAGAGGAACATCTACAGTTTCTGAGGTCATTTGCAGACCTAGATGATGAACAAATATTTAAGATAGTGTTGGTGTTTCCAGCTATTTTTACAAATAACATAGAGAGGAAACTGCGTCCTAGAATACAATTTCTCAAGGAATGTGGGTTAGACTCCGAAGATATCTTCAAGTTCTTGATCCAAGCACCGTTGTTTTTGAGCGCTTCGTTTCGCGATAACCTTGCGTATAAGTTTGTGTTTCTGGTTAAGATTGGGTATAAATATAGGACGAAAGGGTTGGCAATGGCGATTGCGGCTTCAACTAGAATAAGCTGTGAGAATATGCAGAAGGTGCTGAGTTTATTCTTGAACTACGGCTTTTCATTTGAAGACATTTTTGCTATGAGTATGAAGCAGCCATTGATACTGCGGTATAATCATGCCTCTGTAGAGACGAAGATGAAGTACTTGATAGAGGAAATGAATCGTGACATTCGGGAGTTGCTGGATTTTCCTGCATTTCTTGGGTACAAGTTCGATGACAGAATTAAGCATAGGTATGAAATAGAGAAGGGTTTAAAAGGGGGACAGATATCTCTCAATCAGCTGTTAACTGTTTCAAGTGAGAACTTCACCGACAAACAAAAAAAGGATTCTTCTGTAAAATCTGAACTAAAATAA 1563 0.389 MAIAALSIFSNSPSSSSSSSSSSTTTFHPYPSNPSHSLQPTTFSPPLQTQPSFSLLTKSHPPNNYFSSFRFRPSIHSFFRCRSSSNAPNVDVQFGTAISLFQEIGISFEETKLLLLKSNELTSIQLDSLRDRVLSLHSLGLDRVSINHFVTNRLTVLTTNEIDPLLSFLRNELHGQLAQAKLKRLLLSNEPKNLSSFPQKVRLLVDRGMPVDKIVGVLNKVNLSKAICNRSINEIERIIDFLEPFGGVNLIVKHPAILNHCLDSKLIPRISVLTKLSGGDEDGIRIVLNRFPFILNYTVEHVEEHLQFLRSFADLDDEQIFKIVLVFPAIFTNNIERKLRPRIQFLKECGLDSEDIFKFLIQAPLFLSASFRDNLAYKFVFLVKIGYKYRTKGLAMAIAASTRISCENMQKVLSLFLNYGFSFEDIFAMSMKQPLILRYNHASVETKMKYLIEEMNRDIRELLDFPAFLGYKFDDRIKHRYEIEKGLKGGQISLNQLLTVSSENFTDKQKKDSSVKSELK* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5258 520 MobiDBLite consensus disorder prediction 12 43 - -
Tpr2g5258 520 Pfam mTERF 338 505 IPR003690 GO:0003690|GO:0006355
Tpr2g5258 520 Pfam mTERF 136 384 IPR003690 GO:0003690|GO:0006355
Tpr2g5258 520 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF8, CHLOROPLASTIC 102 513 - -
Tpr2g5258 520 PANTHER CGI-12 PROTEIN-RELATED 102 513 IPR003690 GO:0003690|GO:0006355
Tpr2g5258 520 Gene3D Transcription termination factor 3, mitochondrial 87 279 IPR038538 -
Tpr2g5258 520 Gene3D Transcription termination factor 3, mitochondrial 280 515 IPR038538 -
Tpr2g5258 520 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Tpr2g5258 520 SMART mt_12 427 458 IPR003690 GO:0003690|GO:0006355
Tpr2g5258 520 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Tpr2g5258 520 SMART mt_12 357 388 IPR003690 GO:0003690|GO:0006355
Tpr2g5258 520 SMART mt_12 321 352 IPR003690 GO:0003690|GO:0006355
Tpr2g5258 520 SMART mt_12 459 490 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr2g5258 mTERF 8.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5258 - - gmx:100799904 552.747