Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5230 ATGCCACATATTGATGTTCCTGATCTTTCACTTCAAATTAGTCTACCAAATAGTTCACCTTCATCAATTTGCACAAATGAAGTTGATGATTTAGATTCACCTTTTGATATATGGAAAAATAATATTAATGATTCTACTAATACACATCAAGGTTTTAAATCTCATAGTGATGCTTTTTCAACTTCAATCAAACTTTCATTAACAACAACTCCTAGTGAAGTTGAGAGTCCTTTGATGAGAAAAGAATTTGATAGATTAAGACCCTTTAATGGAATCCCTCTTTATAGTGATAACAATCCTTCAATAATAGAGAAAGATTCAAACTTTTCTCTATATCCTTCTTGTTCTTCTAATTCTTCAACTTTTTGTGGTCATAATGGTTTTGAGGGTGTTAAGGGAATTTCAAGGTTTAATGGTATAACTATGGAGAGTTTAAGACCTCAGAAGTTTCAATACTTGAATCAACAAAATCAGCATCATGTTCTACAACAGGAGCAACAACATCAGAAGAATCAGTTAGGGAATATGGGAAATTCTGATTTTGGAAATGGATTTGTGAGGTCAAGAATGATTATGCCAAGACAACAAAGTAATAAGAGGAATATGAGGGCTCCGAGAATGCGATGGACTAGTTCGCTTCATAATCGATTTGTTCACGCCGTTGAACTTCTCGGCGGCCATGAAAGAGCTACTCCAAAGTCAGTTTTGGAGCTAATGGATGTGAAAGATCTAACACTTGCTCATGTCAAAAGCCATTTGCAGATGTTTAGAACTGTTAAAAACACTGACAAGCCAGCAGCTTCTTCAGATGGAGATGAGAATTTCATGTCCCTAACACCACCTCATAATCAAAATAAGAACTATAATGCATCTCTAGATCATGAAATTGGACACACTACAAACAATTTATGGGCTAATTCTTCTTCAAGTAAAGAAACATGGACAGAAGCTAGTTCCAGAGATTTTGATGAGCTTAGTACACATGAAATCCTATCATCTCAACACAATGGGAACCTTCCTCAGGGAAGCAACTACATACAATCAAGAAGCTTCAAGGATCAAAACATAGATTGTCAGAAGAATCCAAACTTGGAGTTCACCTTAGGGAGATCAAATTAA 1119 0.353 MPHIDVPDLSLQISLPNSSPSSICTNEVDDLDSPFDIWKNNINDSTNTHQGFKSHSDAFSTSIKLSLTTTPSEVESPLMRKEFDRLRPFNGIPLYSDNNPSIIEKDSNFSLYPSCSSNSSTFCGHNGFEGVKGISRFNGITMESLRPQKFQYLNQQNQHHVLQQEQQHQKNQLGNMGNSDFGNGFVRSRMIMPRQQSNKRNMRAPRMRWTSSLHNRFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRTVKNTDKPAASSDGDENFMSLTPPHNQNKNYNASLDHEIGHTTNNLWANSSSSKETWTEASSRDFDELSTHEILSSQHNGNLPQGSNYIQSRSFKDQNIDCQKNPNLEFTLGRSN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5230 372 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 5 372 IPR044847 GO:0000976|GO:0006355|GO:0010158
Tpr2g5230 372 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 5 372 - -
Tpr2g5230 372 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 205 258 IPR006447 GO:0003677
Tpr2g5230 372 SUPERFAMILY Homeodomain-like 202 259 IPR009057 -
Tpr2g5230 372 Gene3D - 204 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5230 Tpr-Chr2 58840609 58849817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5230 184 370 G2-like Transcription Factor Family AT5G16560 50.980 2.56e-47 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr2g5230 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5230 - - cam:101493712 456.447