Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5219 ATGGATGGAGATAATGGTCTTAACATAAGCAATTGGGGATACTATGAACCTGTTTCGTCTTTTAAGAGTCATCTTGGGTTACAACTTATGCCATCAATGCCTGAAAAGCCTCTGCTTGGAAGTCACAATGCAGCGGTTTTGTCGGGTTCTAACGGTCCATTTCGTAATAGGGATATCGGGTTACCACAAACTACCTACCCTATGGATTATATGAGGGATGCATGGATCAGTAGTCAGAGGGATAATAAGTATATGAATATGAATATGATACCTACTAACCCTCCGGGTTATAGTAGTATTCCCGAGGCATCTTCGGCTCATCCTATTCAAATGATTCGGCCACCTGAATTGGTTAAGGAAGAAAGGCCAACGGAGGAGGCACCTGTGGTTGAGAAGTCGAATGGAACTGGTAAGAAGAGGCAAGGGCCGAAGGTGCCTAAATCTCCCAAGGCAAAGAAGCCTAAGCGAGGACCTCGTGTGCCGAAGGACGAGAATTCTCCTTCGGTTCAACGAACGCCGAGGGCTCCGAAGAAAACTACTGAAATTGCAATTAATGGAATTGATTTGGATATTTCGAGTATTCCAATTCCTGTTTGTTCGTGCACTGGAACACCTCAACAGTGTTACAGATGGGGATCGGGTGGATGGCAATCTGCATGTTGCACAACGGCTATATCAATATATCCTTTACCTATGAGTACTAAACGGCGTGGTGCTAGAATAGCCGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCGGCCGAGGGTTATAACTTTTCTAATCCAATTGATTTGAGGACTTACTGGGCAAAACATGGCACCAACAAGTTTGTTACTATCAGGTAG 864 0.4387 MDGDNGLNISNWGYYEPVSSFKSHLGLQLMPSMPEKPLLGSHNAAVLSGSNGPFRNRDIGLPQTTYPMDYMRDAWISSQRDNKYMNMNMIPTNPPGYSSIPEASSAHPIQMIRPPELVKEERPTEEAPVVEKSNGTGKKRQGPKVPKSPKAKKPKRGPRVPKDENSPSVQRTPRAPKKTTEIAINGIDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTAISIYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5219 287 MobiDBLite consensus disorder prediction 114 128 - -
Tpr2g5219 287 MobiDBLite consensus disorder prediction 114 181 - -
Tpr2g5219 287 PANTHER - 1 287 IPR010409 -
Tpr2g5219 287 SMART GAGA_bind_2 1 287 IPR010409 -
Tpr2g5219 287 Pfam GAGA binding protein-like family 1 287 IPR010409 -
Tpr2g5219 287 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5219 Tpr-Chr2 58681393 58683318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5219 1 287 BBR or BPC Transcription factor family AT2G01930 50.836 1.12e-92 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Tpr2g5219 GAGA_bind 5.9e-103 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5219 - - cam:101489911 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5219 2 58681393 58683318 Tpr2g5219 2 58681393 58683318 ECH