Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5207 ATGGAAAGCCTTTCTAATTCCATAGAGAATAGAGAAGAGGAAGAAATTTTAGAGGATGAAGAAGAAAGCTTCTCATATGCTATGCAGCTTGCAGTCTCTGTTGCACTTCCCATGGCACTTCAAGCTGCAATTGAACTTGGTGTATTTGAAGTGTTGCAAAATGCTGGTAAAGGTGCTCGACTCACTGCTGATGACATTGTTTCCCGTCTTTCCAAAATTAACAATCCCGAAGCTTCCAAAATGCTAGATCGCATTCTTGCTCTTCTTTCCTCTCACTCAGTGCTTAAGTGTTTTATTGCTCCCAATTCCTCTCAGAGACACTACTGCATGACGGGTGTTGCCAAATTTTTTGCTCCTAATTTCGATGGGTTTTCATTAGCACCCTTGACTTCCTTGAATAATGATAAGATCATATTAGCTAGCTGGTCCCATCTTAAAGATGCAATTCAGGATGGAGATACACCATTCAACAGGGCTCATGGCAGCCATTTCTTTGATCTTCCCAACTTAGACTCGAGGTTCAATCAAGTTTTCAATAAAGCAATGAGCAATCATACAACTATAGTCATGAAGAAGGTTCTTGAATGCTACAAAGGTTTTAGAGACATAAAAAGACTTGTGGATGTTGGTGGAGGCCTTGGAATAAACATTAATATGATCACTTCAAAACACACTCACATTCATGGAATCAATTACGACTTGCCTCATGTCATACAACATGCTCCTTCCTATCCTGGAGTGGAGCATATTGGCGGAGATATGTTTGAAAGCGTGCCCAATGTTGATGCCATTTTTATGAAGATACTTCATGATTGGAATGATGAACGTTGCTTGAAACTTCTGAAGAATTGTTATGATGCTATTCCTGATGATGGGAAGGTGATAGTTTTGGATGCACTTCTACCTATTATGCCTAAGAATGAAGTGGCTTGGAAATCTATCTCCCAAATGGATATTGCCATGATGAATCTTTTTCCAGAAGGCAAAGAGCGAACTAAGCAAGAATTCATGGATTTGGCAACTAAAGCTGGATTTCGTGGCATCAAATATGAATGTTGTACTTATAATTTATGGGTTATGGAGTTCTTCAAGTAA 1095 0.3918 MESLSNSIENREEEEILEDEEESFSYAMQLAVSVALPMALQAAIELGVFEVLQNAGKGARLTADDIVSRLSKINNPEASKMLDRILALLSSHSVLKCFIAPNSSQRHYCMTGVAKFFAPNFDGFSLAPLTSLNNDKIILASWSHLKDAIQDGDTPFNRAHGSHFFDLPNLDSRFNQVFNKAMSNHTTIVMKKVLECYKGFRDIKRLVDVGGGLGININMITSKHTHIHGINYDLPHVIQHAPSYPGVEHIGGDMFESVPNVDAIFMKILHDWNDERCLKLLKNCYDAIPDDGKVIVLDALLPIMPKNEVAWKSISQMDIAMMNLFPEGKERTKQEFMDLATKAGFRGIKYECCTYNLWVMEFFK* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5207 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 364 IPR016461 GO:0008168
Tpr2g5207 364 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 10 364 - -
Tpr2g5207 364 PIRSF O-mtase 4 364 IPR016461 GO:0008168
Tpr2g5207 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 362 IPR029063 -
Tpr2g5207 364 Gene3D - 5 117 IPR036388 -
Tpr2g5207 364 Gene3D Vaccinia Virus protein VP39 119 364 IPR029063 -
Tpr2g5207 364 Pfam Dimerisation domain 38 89 IPR012967 GO:0046983
Tpr2g5207 364 PANTHER O-METHYLTRANSFERASE 10 364 IPR016461 GO:0008168
Tpr2g5207 364 CDD AdoMet_MTases 205 296 - -
Tpr2g5207 364 Pfam O-methyltransferase domain 142 346 IPR001077 GO:0008171
Tpr2g5207 364 SUPERFAMILY "Winged helix" DNA-binding domain 19 120 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5207 Tpr-Chr2 58439682 58452018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5207 20 364 Monolignol Biosynthesis Gene Families AT5G54160 49.570 1.23e-121 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5207 K13066 - gmx:100803633 467.233