Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5206 ATGGAAAGCCTTTCTAATTCCATAGAGAATAGAGAAGAGGAAGAAATTTTAGAGGATGAAGAAGAAAGCTTCTCATATGCTATGCAGCTTGCAGTCTCTGTTGCACTTCCCATGGCACTTCAAGCTGCAATTGAACTTGGTGTATTTGAAGTGTTGCAAAATGCTGGTAAAGGTGCTCGACTCACTGCTGATGACATTGTTTCCCGTCTTTCCAAAATTAACAATCCCGAAGCTTCCAAAATGCTAGATCGCATTCTTGCTCTTCTTTCCTCTCACTCAGTGCTTAAGTGTTTTATTGCTCCCAATTCCTCTCAGAGACACTACTGCATGACGGGTGTTGCCAAATTTTTTGCTCCTAATTTCGATGGGTTTTCATTAGCACCCTTGACTTCCTTGAATAATGATAAGATCATATTAGCTAGCTGGTCCCATCTTAAAGATTCAATTCAGGAAGGAGATACTCCAATCAACAGGGCTCATGGCAGCCATTTCTTTGATCTTCCCAGCTTAGACTCGAGGTTCAATCAAGTTATTAATAAAGCAATGAGCAATCATACAACTATAGTCATGAAGAAGGTTCTTGAATGCTACAAAGGTTTTAGAGACATAAAAAGTCTTGTGGATGTTGGTGGTGGCCTTGGAATAAACATTAACATGATCACTTCAAAATACACTCACATTCAGGGAACCAATTTCGACTTGCCTCATGTCATACAACATGCTCCTTCCTATCCTGGAGTGGAGCATATTGGCGGAGATATGTTTGAAAGCGTGCCCAATGGTGATGCCATTTTTATGAAGTGGATGCTTCATGATTGGAATGATGAACGTTGCTTGAAACTTCTGAAGAATTGTTATGATGCTATTCCTGATAATGGGAAGGTGATAGTTTTGGAGGCACTTCTACCTATTATGCCTAAGAATGAAGTGGTTTGGAAATCTATCTCCCAAATGGATATTCTCATGATGAATCTTTTTTCAGAAGGCAAAGAGCGAACTGAGCAAGAATTCATGGATTTGGCAACTAAAGCTGGATTTCGTGGTATCAAATATGAATGTTGTACCTATAACTTTTGGGTTATGGAGTTCTTCAAGTAA 1098 0.3944 MESLSNSIENREEEEILEDEEESFSYAMQLAVSVALPMALQAAIELGVFEVLQNAGKGARLTADDIVSRLSKINNPEASKMLDRILALLSSHSVLKCFIAPNSSQRHYCMTGVAKFFAPNFDGFSLAPLTSLNNDKIILASWSHLKDSIQEGDTPINRAHGSHFFDLPSLDSRFNQVINKAMSNHTTIVMKKVLECYKGFRDIKSLVDVGGGLGININMITSKYTHIQGTNFDLPHVIQHAPSYPGVEHIGGDMFESVPNGDAIFMKWMLHDWNDERCLKLLKNCYDAIPDNGKVIVLEALLPIMPKNEVVWKSISQMDILMMNLFSEGKERTEQEFMDLATKAGFRGIKYECCTYNFWVMEFFK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5206 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 363 IPR029063 -
Tpr2g5206 365 PANTHER O-METHYLTRANSFERASE 10 365 IPR016461 GO:0008168
Tpr2g5206 365 Gene3D - 5 117 IPR036388 -
Tpr2g5206 365 Gene3D Vaccinia Virus protein VP39 119 365 IPR029063 -
Tpr2g5206 365 Pfam Dimerisation domain 38 89 IPR012967 GO:0046983
Tpr2g5206 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 365 IPR016461 GO:0008168
Tpr2g5206 365 Pfam O-methyltransferase domain 142 347 IPR001077 GO:0008171
Tpr2g5206 365 PIRSF O-mtase 4 365 IPR016461 GO:0008168
Tpr2g5206 365 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 10 365 - -
Tpr2g5206 365 SUPERFAMILY "Winged helix" DNA-binding domain 19 120 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5206 Tpr-Chr2 58431125 58436142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5206 20 365 Monolignol Biosynthesis Gene Families AT5G54160 49.284 1.36e-123 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5206 K13066 - gmx:100803633 478.789