Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5205 ATGGCTATACAATCGTATTCCTCTTCTTCGTCCTCCTTCTCTTATGATTACACCTACGATGTCTTCATTAGTTTTAGAGGCCCTGACACTCGCTTTGGTTTTACTGGCAATCTCTATAAAGCTCTTTCTGACAATGGAATCCGAACTTTCATTGATGACAAGGAGCTTCAAGGAGGTGAAGAAATCACAGCTTCACTCCTCAAGAACATCGAAGACTCGCGGATTGCCGTAATCGTCTTTTCTAAGAACTATGCTACTTCTTCATTTTGTTTAGACGAACTTGTCCACATTATTCACCACTTCAAGAAAAAGAATCGCCTTGTTTTGCCAATTTTCTATGGCACAAAACCTTCTCATGTGCGACATACGAATCACAGCTATGGTGAAGCACTTGCTAAGCATGAAAAGAAGTTCCAACATAACAAGGAAAACATGAACAGGTTGGAGGAATGGAAGATGGCTCTCAACCAAGCTGCTAACCTCTCAGGTTACCATTTCAATCTTAGGAATGAAGAATATGAATATGTGTTTATTAACAAGATAGTTGCAGAGATTTCCAACAAGATCAATCGCGTCCTTTTACATGTTGCCGATCACCCTGTTGGGCTGGAGTCTCGACTACTGCAGGTAGAGTCGCTTCTAGATCTTGCTTCTGATAATGGAACATGTGTGATTGGGATATATGGAAGTGGAGGATTGGGTAAAACAACACTTACTCGAGCTGTTTATAATTTGATTGCTGATCAATTTGAAAGTTTGTGTTTCCTTCACAATGTTAGACAAAATTCAATTAAATATGGCTTAGAATATCTCCAAGAGCAATTACTCTCCAAATCAATTGGATTGAACATTCACCTAGGACATGTTAATGAAGGAATTCCAATCATAAAGCAAAGGTTACACCAAAAGAAAGTTTTGTTGATTCTCGATGACGTTGACAAACTAAAGCAGTTGCAGGTTTTGGTCGGGGAGCCTAGTTGGCTCGGACCTGGAAGTAAAGTCATCATTACCACTCGAGACAAATATTTGCTACAATGTCATGGGATTAAAAGAATATATGAAGTAGATGCATTAAATGAGGAAGAAGCTCTTGAATTGTTTAGGTGGATGGCTTTTAAAAATAACAAGAATGATTCAAGTTATGATCATATTTTAAACCGTGTAGTTAAATATGCTTCTGGCCTTCCATTAGCTTTAGAAGTAGTGGGTTCCAACTTGTTTGGAAAGAGTGTAGTAGAATGGAAATCTACATTAGATAAGTATGAAAGGATTCCACATGAAGATATCCAAAAGATACTTAAAGTAAGCTATGATGCTTTGGACGAAGAACAACAAAGTGTCTTTTTGGATATTGCTTGTTGCTTCAAAGGGTGTGGATTGGCAGAAGTTGAAGAGATACTTCATGGTCATTATGGTCATTGCATACAAAGCCACATTGGAGTGTTGGTTGATAAATCTCTCATTAAGATTATTAGTGTGCCTTGGTGGGTTGATAAGGTTAAAGTGACATTACATGACTTAATAGAAGATATGGGTAAAGAAATTGTCCGACAAGAATCTCCCAAAGAGCCTGGCAAATGCAGTAGGTTATGGTTTCATGACGATATAGTCAATGTTTTGAAAGGAAACACGGGAACTAATAAAATTGAAATGATATATCTGAATTGCCCCTCCAAGAAATTCAAAATAGACTGGAATGGAGAGGCCTTTAAGAAGATGACAAAACTCAAAACACTTATCATTGAAAATGGTCATTTTTCTCAAGGTCCCAAGTATCTTCCATGTACTTTGAGAGTATTGAAATGGAATAGATATCCTTCCAAGTCTCCACCTTCTAGTGCTTTGAACAAGGAGTTCAAGAATATGACAATTTTGAAATTTGACAATTCTAAATACTTAACAAATATACCCAACGTCTCGTGCCTACCAAATTTAGAAATTTTTTCTTTCAAAAATTGCAAGAATTTAACTACAGTTCATGATTCTATTGGGTTCCTTACCCACCTTCAAATCTTGAATGCAGAGAATTGTGACAAGCTACTGAGTTTTCCACCCTTAAAGTTGATTTCTCTTTTAGAGTTGGAACTTTCAGGTTGTACAAATCTCAATAAATTTCCAGAAATATTGGACAAGATGGAAAACATCAAAGAGATTACTTTGATAAATACTGGCATAAAAGAATTTCCATTTTCATTTCAAAATCTTACCGAACTTTATGCCTTATTTATAAACGGACATGGAAAACTCGGGTTGCCAAGTAGCATTCTCATGATGTCAAATTTGTTGTATGTTAACATTAACGGTTTTAGTCAATTATTACCAAAACTGAATGATAAACCGGGTTCCATGTTGCCGATATCAAATGTCAAAGCTATTTTCCTTGAAACAAGCAAGCATGGATTTCTAAACATAGCTCTCACATGGTTTTCTAATGTGGAATTTTTATTTCTATCGCGTAGTAATATAAAAATTCTTCCTGAATGCCTAAAAGAATGCCACTTTCTAAAGAGCATTGATTTGGATGGTTGCAAATATCTTGAGGAAATCAGAGGGATTCCGCCAAATCTTAAAACATTGTCTGCATTTGGGTGCTATTCATTGACTTCGTCAAGTAAAAGCATGCTAGTGAGTAAGGAACTGCATGAGACTGGAGGCACAAAGTTTTATTTTCCATCATCAAGAAGTGATAAGATTCCGACATGGTTTGAGCACCAAAGCAGAGAGCCGTCATTTTCTTTTTCATTCCGTAACAACCTCCCTTCCTTAGTTTTCATCTTTTCTTCGAAACAAATGCACGAATGGGGTCTCCACAAAGGAGATGTTGATCCTGTATTAAGAGCCAACTTATACATCAATGATAATAGATGTTTACAACTTCTTCACGGAAGTCTTGAAGGCAACAAATCACGAATGAAATATGGATAG 2925 0.3658 MAIQSYSSSSSSFSYDYTYDVFISFRGPDTRFGFTGNLYKALSDNGIRTFIDDKELQGGEEITASLLKNIEDSRIAVIVFSKNYATSSFCLDELVHIIHHFKKKNRLVLPIFYGTKPSHVRHTNHSYGEALAKHEKKFQHNKENMNRLEEWKMALNQAANLSGYHFNLRNEEYEYVFINKIVAEISNKINRVLLHVADHPVGLESRLLQVESLLDLASDNGTCVIGIYGSGGLGKTTLTRAVYNLIADQFESLCFLHNVRQNSIKYGLEYLQEQLLSKSIGLNIHLGHVNEGIPIIKQRLHQKKVLLILDDVDKLKQLQVLVGEPSWLGPGSKVIITTRDKYLLQCHGIKRIYEVDALNEEEALELFRWMAFKNNKNDSSYDHILNRVVKYASGLPLALEVVGSNLFGKSVVEWKSTLDKYERIPHEDIQKILKVSYDALDEEQQSVFLDIACCFKGCGLAEVEEILHGHYGHCIQSHIGVLVDKSLIKIISVPWWVDKVKVTLHDLIEDMGKEIVRQESPKEPGKCSRLWFHDDIVNVLKGNTGTNKIEMIYLNCPSKKFKIDWNGEAFKKMTKLKTLIIENGHFSQGPKYLPCTLRVLKWNRYPSKSPPSSALNKEFKNMTILKFDNSKYLTNIPNVSCLPNLEIFSFKNCKNLTTVHDSIGFLTHLQILNAENCDKLLSFPPLKLISLLELELSGCTNLNKFPEILDKMENIKEITLINTGIKEFPFSFQNLTELYALFINGHGKLGLPSSILMMSNLLYVNINGFSQLLPKLNDKPGSMLPISNVKAIFLETSKHGFLNIALTWFSNVEFLFLSRSNIKILPECLKECHFLKSIDLDGCKYLEEIRGIPPNLKTLSAFGCYSLTSSSKSMLVSKELHETGGTKFYFPSSRSDKIPTWFEHQSREPSFSFSFRNNLPSLVFIFSSKQMHEWGLHKGDVDPVLRANLYINDNRCLQLLHGSLEGNKSRMKYG* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5205 974 Gene3D Ribonuclease Inhibitor 704 882 IPR032675 -
Tpr2g5205 974 ProSiteProfiles TIR domain profile. 17 189 IPR000157 GO:0007165
Tpr2g5205 974 SUPERFAMILY L domain-like 516 873 - -
Tpr2g5205 974 Gene3D - 357 441 IPR042197 -
Tpr2g5205 974 Pfam TIR domain 19 191 IPR000157 GO:0007165
Tpr2g5205 974 Gene3D - 190 350 IPR027417 -
Tpr2g5205 974 CDD AAA 201 340 - -
Tpr2g5205 974 Gene3D Ribonuclease Inhibitor 527 703 IPR032675 -
Tpr2g5205 974 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 451 IPR027417 -
Tpr2g5205 974 Pfam NB-ARC domain 210 442 IPR002182 GO:0043531
Tpr2g5205 974 PANTHER ARCHAEAL ATPASE 29 919 - -
Tpr2g5205 974 PRINTS Disease resistance protein signature 224 239 - -
Tpr2g5205 974 PRINTS Disease resistance protein signature 299 313 - -
Tpr2g5205 974 PRINTS Disease resistance protein signature 392 406 - -
Tpr2g5205 974 PRINTS Disease resistance protein signature 686 702 - -
Tpr2g5205 974 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 919 IPR044974 GO:0006952
Tpr2g5205 974 Gene3D - 16 189 IPR035897 -
Tpr2g5205 974 SMART till_3 18 161 IPR000157 GO:0007165
Tpr2g5205 974 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 164 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5205 Tpr-Chr2 58426643 58430925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5205 13 839 WRKY Transcription Factor Family AT4G12020 28.408 3.35e-71 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5205 - - mtr:MTR_6g072460 1243.41