Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5195 ATGGCTGAGTTTGGGAAAGATGAAGTGCCAATTCTCTCAGATACTATTCCAAAACAATCAAATGAACCTGATGATTCCAAATTCCCGAGTCTTGTACCTAGGACGCGAAGTGTTTCGATTTCCATTCCAATGATACCTATGGATCCATATGAAAGAGATACTAATCTTAGAGGACACACTGGTCCTCTAAGGAGTAAAAGAAAAACACCATTTAGTCCAATGAGTGGTCCATTATATGTTACTCATAGACCCGAAAATCTTTTCTGGCAGAATATGGTCGCGCAGAGGAGCAATGCAGTGGAAAGTAAGACAGAAAAGTTTCCTTTATGTAACATTATGAGTGGACATGATTTGCAGAATAACTATGCTGGTAAAAATGAACATTTAGTAAGGTCTGGTCCATTGGGAATGTGTAATGATCCATACTGTACAACTTGTCCAACTTACTTTAAGGCTACTCAACAAATGGATTCGAAAAATTCGGGTTTGTTCAATCCTAAGAATGCCTTCTACGGTGATGCAAAGGATTGGGCAAGAAGAATTTTTGCTTTCTTGATTCCGAATGTACCTAGAGTTATGAATCCACATAATAAACTTGTACAACAATGGAATAAATTTTTTGCAATTTGTTGCTTGGTGGCAATTTTTGTGGATCCATTATTTTTCTTCTTGCTGTCTGTGAATAAGGAACGTAAATGTATTGTTATTGACTCGACTATCACAACAGTGCTTATTTTACTTAGAAGTACGAATGATTTCATACATTTCCTAAATATTATTCTTCAGTTTAGGTTGGCTTATGTAGCTCCTGAGTCTAGGGTGGTTGGTGCCGGGGAGTTGGTTGACCATCCTAAGAAAATTGCTCGTCATTATCTCCAGACATATTTTCTTTTTGACTTGTTTGTTGTACTTCCACTTCCTCAGATAATGATATTGTTTTTCCTACCAAAACACTTGGGAACATCGGGCGCAAATCATGCGAAGAATCTTTTGCGCGGCGCCGTCCTTGCTCAGTACATGCCCAGATTGTGTAGATTTCTTCCTATGCTAATTTCTCCGTCAGGGTTCATATTTGAGTCAGCATGGGCAAGTTTCTTCATAAATCTTTTTACGTTCATGCTATCTGGCCATGTTGTTGGGTCATGGTGGTATCTCTTCGGTTTGCAGAGGGTTAATCAATGTCTACGAAGTGCGTGCAAGAAAACATATTTTCATGAATGCTCAAAATTCATTGATTGTGGACATGGAGGCAGTGAGTACCATCATCAAAATGAAACAAATTTGTTTAATTGGAGGAAAAATGAGAATGCGAGCGCTTGTTTTACAGAAGATTATTTTGAATATGGGATTTATCTTAAAGCTGTTAACCTTACTACAAAACATAATGTGCTCACAAGATATGTATATTCATCATTTTGGGGATTTCAGCAAATTAGCACTCTAGCTGGAAATTTGTCACCAAGCTATTTTATTTGGGAAGTTCTTTTTACTATGGGAATTATTGGATTAGGACTCTTGCTTTTTGCTCTTCTCATTGGTAACATACAAAACTTTCTTCAGGCTCTTGGAAGAAGGAGGCTAGAAATGTCACTTAGACAACGCGATGTTGAGCAATGGATGAGCCATAGGCGCTTAGCACAAGACCTGAGAAGGAGAGTGCGACAAGCAGAACGTTATAATTGGGCTGCAACGAGAGGAGTGAATGAAGAAATACTCATGGAGAATTTACCAGAAGATCTTCAGAGGGACATCAGACGTCATCTCTTTAAATTTGTTAAGAAGGTTCGAATTTTTTCCTTGATGGATGAGCCGATATTGGATGCCATTTGTGAGAGACTAAGACAAAAAATATATATCAAAGGAAGCAAAATTTTGTATGATGGTGGCTTGGTAGAGAAAGTGGTTTTTATTGTTCGCGGAAAATTGGAAAGTATTGGTGAAGATGGAATTAGAGTTCCTTTATCGGAGGGCAATGTTTGTGGTGAAGAACTTCTGACATGGTGTCTTGAGCATGCTTCAGGAAACAAAGGTTGTGGAAAAACAAGAATTCCAAGACAAAGGTTGGTAATTAGCAATAGGACAGTATTGTGCCTAACAAATGTGGAGGCATTTTCAATTAGAGCAGCAGACCTTGAAGAAGTTACAAGTATTTTTGCAAGATTCTTGAGGAATCCTGGTGTTCAAGGAGCCATAAGGTATGAATCACCTTACTGGAGATGTCTTGCAGCGACGCGGATTCAGGTTGCATGGAGATACAAAAAGAAACGCCTTTGTCGCGCTAACACTTCACAATCAAATAATGAAGCATCAAAGTATCATTTCTGTGATATCAAAGTATCACACACAAAGTGGAGGGACTGA 2361 0.3846 MAEFGKDEVPILSDTIPKQSNEPDDSKFPSLVPRTRSVSISIPMIPMDPYERDTNLRGHTGPLRSKRKTPFSPMSGPLYVTHRPENLFWQNMVAQRSNAVESKTEKFPLCNIMSGHDLQNNYAGKNEHLVRSGPLGMCNDPYCTTCPTYFKATQQMDSKNSGLFNPKNAFYGDAKDWARRIFAFLIPNVPRVMNPHNKLVQQWNKFFAICCLVAIFVDPLFFFLLSVNKERKCIVIDSTITTVLILLRSTNDFIHFLNIILQFRLAYVAPESRVVGAGELVDHPKKIARHYLQTYFLFDLFVVLPLPQIMILFFLPKHLGTSGANHAKNLLRGAVLAQYMPRLCRFLPMLISPSGFIFESAWASFFINLFTFMLSGHVVGSWWYLFGLQRVNQCLRSACKKTYFHECSKFIDCGHGGSEYHHQNETNLFNWRKNENASACFTEDYFEYGIYLKAVNLTTKHNVLTRYVYSSFWGFQQISTLAGNLSPSYFIWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGRRRLEMSLRQRDVEQWMSHRRLAQDLRRRVRQAERYNWAATRGVNEEILMENLPEDLQRDIRRHLFKFVKKVRIFSLMDEPILDAICERLRQKIYIKGSKILYDGGLVEKVVFIVRGKLESIGEDGIRVPLSEGNVCGEELLTWCLEHASGNKGCGKTRIPRQRLVISNRTVLCLTNVEAFSIRAADLEEVTSIFARFLRNPGVQGAIRYESPYWRCLAATRIQVAWRYKKKRLCRANTSQSNNEASKYHFCDIKVSHTKWRD* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5195 786 ProSiteProfiles cAMP/cGMP binding motif profile. 597 665 IPR000595 -
Tpr2g5195 786 Gene3D Jelly Rolls 595 720 IPR014710 -
Tpr2g5195 786 MobiDBLite consensus disorder prediction 1 33 - -
Tpr2g5195 786 Gene3D Helix hairpin bin 525 589 - -
Tpr2g5195 786 PANTHER CYCLIC NUCLEOTIDE-GATED CATION CHANNEL PROTEIN 26 761 - -
Tpr2g5195 786 Gene3D - 206 522 - -
Tpr2g5195 786 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 26 761 - -
Tpr2g5195 786 SUPERFAMILY Voltage-gated potassium channels 195 525 - -
Tpr2g5195 786 MobiDBLite consensus disorder prediction 14 33 - -
Tpr2g5195 786 CDD CAP_ED 597 714 IPR000595 -
Tpr2g5195 786 Pfam Ion transport protein 203 525 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Tpr2g5195 786 SUPERFAMILY cAMP-binding domain-like 525 720 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5195 Tpr-Chr2 58263846 58275362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5195 7 677 Ion Channels AT3G17700 60.324 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5195 K05391 - gmx:100795955 1214.52