Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5194 ATGAATCATTTTGATAAAGATGAAATTCCGATGCTGTCAGAATCACCTACTCAACGATCTGATGAACCTCAGGATTCTACATTCCGAAGAAACATATCAAGTACACGAAGTGCTTCATCAAGTACACGAAGTGCTTCAATCTCTATTCCAATGGCTTCTCTGGATCAATATGAGAGACAGCCGAATCTTGTCAGACATACTGGTCCACTTCGTACTGCGAGGAAAACTCCGTTGGGGCAAATGAGTGGTCCCTTATATGCAACTCCTGCAACTGGAAATCCTTTTCAGAATAGTATAGTAGTGGCAGGAAAGAAAGTAGGAGAGAACAAGACAGAGAAGTTTGATGGCACAGATGAACATCGTTGGAATGATAATGACTACGACAAAAAAAATGAGCACTTGTTGAGGTCTGGACAACTCGGAATGTGTAGTGATCCTTATTGCACTACTTGCCCTACTTACTTCAAGGTTTCTCAGCAAACAAATCAAAGAGCTTCCGTTATACTTGATCCCAAGTTCCACAATTCTCTTTATGGCGACGCCAAAGGAGATACCAAAGGTTATGGGAGAAAACTTTATTCTTTCTGTTCTTCATGTATTCCTGGAGTTATGAACCCTCATAATAAAGTTGTACAACATTGGAACAAGTTTTTGGCCATATTTTGCTTGGTCGCAATTTTTGTTGATCCATTATTTTTCTTCTTAATTTATGTGAACAAGGATGAGAAATGTATATGTATCAACTGGACAATGGCAAACACGCTTGTTTCAATTAGAAGCATAACTGATATTGTGTATTTCTTGAATATTCTTCTCCAGTTTAGGTTGGCATATGTTTCTCCCGATTCAAGGGTGGTTGGTGCTGGTGATTTAGTTGACCATCCCAAGAAGATTGCTCTTAATTACATTAAGAGCTATTTTTTCTTTGACTTGTTTGTTGTAGCACCTCTTCCTGAGATAATGATATTTTTTATCCTACCAATATCCTTGGGGTTATTAGGAGCAAATTATACGAAGAATATTCTACGTCTAGCGATCCTTGTACAATATATTCCCAGATTATTCAGATTTTTGCCTCTGCTAATTGGCCAGTCTCCAACAGGATTCATATTTGAGTCAGCTTGGGCAAATTTCATTATAAATCTTCTCATTTTTATGCTATCTGGCCATGTCGTTGGTTCATGTTGGTACCTCTTTGGTCTACAGAGGGTTAACCAATGTTTGCGAGATGCCTGTCATCTTTCTGAACTAGTGGGATGCAAGGAATTGATTGATTGTGATGCTAATGCGCCTAATGAAACAGCTCCGCAGTGGAGAAACAATACTCGCGCTAATGATTGTTTGAATCCCACATCTGGTGTTTTTGCTTATGGAATCTATGGCTCTGCCGTACAACTTACTATAGAAACTAGGGTGATTAACAAATATGTGTATGCCTTGTTTTGGGGATTCCAGCAAATCAGTACTCTAGCTGGTAATCAAACCCCGAGCTATTTTGTGTGGGAAGTCCTCTTTACAATGTCTATCATAGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAGAACTTTCTTCAGTCTCTTGGACGGAGGAGGTTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCATCATCGCTTACCAGAAGATCTTAAAAGGAGAGTACGGCAGGCTGAACGGTATAGTTGGGCTGCAACAAAGGGTGTTCCTGAGAAAATGGTTCTCAATAATTTGCCAGAAGATCTCCAGACAGACATAAGACGCCACCTCTTCAAATTTGTTAAAAGTGTTCGAATTTTTTCCCTGATGGATGAGGATGAGCCTATCTTAGACGCCATTCGTGAGAGACTAATTCAGACGACATACATTAAAGGAAGTAAAATTTTGAGTCAGGGAGGTCTCGTACAGAAGATGGTATTTATTGTGCGTGGAAAATTGGAGAGCATCGGAGAAGATGGTATTCCAGTTCCGTTAACCGAAGGGGATGCTTGTGGTGAAGAACTTCTAAGATGGTATCTTGAACAGTCTTCTGAAAGCAAAGAATGTAAAAAAGTAAAGCTTCAAGGACAAGGGTTGACTAGTGATAGAACAGTAAGATGCTTAACCAATGTAGAGGCATTTTCACTCCGCACTAAAGACATTGAAGAAGTCACAACTCTTTTTGCAAGATTCTTGCGGAGCCCTCGTGTTCAAGGAGTCATAAGGTATGAATCACCATACTGGAAATCACTTGCAGCAAACAGAATTCAGGTTGCATGGAGATACAGGAAGAAGCGTCTAAATCGAGCAACTACCACATAA 2322 0.4001 MNHFDKDEIPMLSESPTQRSDEPQDSTFRRNISSTRSASSSTRSASISIPMASLDQYERQPNLVRHTGPLRTARKTPLGQMSGPLYATPATGNPFQNSIVVAGKKVGENKTEKFDGTDEHRWNDNDYDKKNEHLLRSGQLGMCSDPYCTTCPTYFKVSQQTNQRASVILDPKFHNSLYGDAKGDTKGYGRKLYSFCSSCIPGVMNPHNKVVQHWNKFLAIFCLVAIFVDPLFFFLIYVNKDEKCICINWTMANTLVSIRSITDIVYFLNILLQFRLAYVSPDSRVVGAGDLVDHPKKIALNYIKSYFFFDLFVVAPLPEIMIFFILPISLGLLGANYTKNILRLAILVQYIPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACHLSELVGCKELIDCDANAPNETAPQWRNNTRANDCLNPTSGVFAYGIYGSAVQLTIETRVINKYVYALFWGFQQISTLAGNQTPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQSLGRRRLEMQLRGRDVEQWMSHHRLPEDLKRRVRQAERYSWAATKGVPEKMVLNNLPEDLQTDIRRHLFKFVKSVRIFSLMDEDEPILDAIRERLIQTTYIKGSKILSQGGLVQKMVFIVRGKLESIGEDGIPVPLTEGDACGEELLRWYLEQSSESKECKKVKLQGQGLTSDRTVRCLTNVEAFSLRTKDIEEVTTLFARFLRSPRVQGVIRYESPYWKSLAANRIQVAWRYRKKRLNRATTT* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5194 773 Gene3D Helix hairpin bin 533 598 - -
Tpr2g5194 773 MobiDBLite consensus disorder prediction 13 53 - -
Tpr2g5194 773 MobiDBLite consensus disorder prediction 1 53 - -
Tpr2g5194 773 CDD CAP_ED 606 724 IPR000595 -
Tpr2g5194 773 Gene3D - 216 531 - -
Tpr2g5194 773 Gene3D Jelly Rolls 604 730 IPR014710 -
Tpr2g5194 773 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 772 - -
Tpr2g5194 773 SUPERFAMILY Voltage-gated potassium channels 206 533 - -
Tpr2g5194 773 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 772 - -
Tpr2g5194 773 ProSiteProfiles cAMP/cGMP binding motif profile. 608 676 IPR000595 -
Tpr2g5194 773 SUPERFAMILY cAMP-binding domain-like 534 727 IPR018490 -
Tpr2g5194 773 Pfam Ion transport protein 216 534 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5194 Tpr-Chr2 58240288 58265450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5194 2 684 Ion Channels AT3G17700 56.792 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5194 K05391 - ccaj:109789004 1137.09