Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5193 ATGAATCATGTTGATAAAGATGAAAGTCCGATGCTGTCAGAAACACGTACACAACGATCTGATGAGCCTCAGGATTCTACATTCCGAAGAAACATATCGAGGATACAAAGTGCTTCAATCTCTATTCCTATGGATTCTCTGGATCCATATGAGAGACAGCCGAATCTTGTCGGACATACTGGTCCGCTTCGTACTGCGAGGAAAACACTGTTGGGGCAAATGAGTTGTCCCTTATATGCAACTCCTGCAACTGGAAATCCTTTTCAGAATAGTATAGTAGTGGCAGGAAGCAAAGTAGGAGAGAACAAGACAGATAAGTTTGATGGCACAGATGAACATCGTTGGAATGATAATGACTACGACAAAAAAAACAAGCGCTTGTTGAGGTCTGGACAACTCGGAATGTGTAATGATCCTTATTGCACTACTTGCCCTACTTACTTCAAGTTTTCTCAGGAAAGAAAACCAAGATCTTCCACTATATTTGACCCCGAGTTCCACAATTCTCTTTATGGCGACGCCAAAGGTTTTGGAAGAAAACTTTTATCTTTTTGCTCTTCATGCATTCCTGGAGTTATGAACCCTCATACTAAAGTTGTACAACATTGGAACCAGTTTTTGGCCATATCTTGCATACTCTCAATTTTTGTTGATCCATTATTTTTCTTCTTAATATATGTGAACAAGCGTGATAAATGTATTCTTATCAACTGGGATATGGCAAAAATACTTATTGTACTTAGAAGCATAACTGATTTTGTGTATTTCTTGAACATTCTTCTCCAGTTTAGGTTGGCTTATATTTCTCCTGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGTCGACCATCCGATGAAAATTGCTCGTAATTACTTTAAGAGTTATCTTGGCGTTGACTTATTTGTTGTAGTACCTCTTCCTCAGATAATGATATTGGTTGTCCTACCAAGTTCCTTGGGGAATTCAGGAGCAAATTATGCTAAGAATCTTCTACGTCTAGCGATCCTTATACAATATATTCCCAGATTATTCAGATATTTGCCTCTGCTAATTGGCCAGTCTCCAACTGGATTCATATTTGAGTCAGCTTGGGCAAATTTCATTATAAATCTTCTCATTTTTATGCTATCTGGCCATGTTGTTGGTTCATGCTGGTACCTCTTTGGTCTACAGAGGGTTAACCAATGTTTGAGAGATGCCTGCAAACATTCTCTTCTACCTGATTGCATGAAGTTGATTGACTGTAAAGCGGAGAGTATATCAACTAAATGGATCAATGATGAGGGTGCCAGTGCTTGTTTGAATTCTTCATCCGATGCTTTTGCTTATGGAATCTATGATAAAGCTGTACACCTTACTATAGAAACTAACCTGATCAAGAAATACGTGTATGCACTTTTTTGGGGATTCCAGCAAATCAGTACTCTAGCTGGTAATCAAACCCCAAGCTATTTTGTGTGGGAAGTCCTGTTTACAATGTCTATCATAGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAAAACTTTCTTCAGTCTCTTGGACGGAGGAGGTTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAACCATCGTCGCTTACCAGAAGATCTTAAAAGGAGAGTACGGCAGGCTGAACGGTATAGTTGGGCTGCAACAAGGGGTGTTCCTGAGAAAATGGTTCTCGAGAATTTGCCAGAAGATCTCCAGACAGACATAAGACGCCACCTCTTCAAATTTGTTAAAAGTGTTCGAATTTTTTCCCTGATGGATGAGGATGAGCCTATCTTAGACGCCATTCGTGAGAGACTAATTCAGACGACATACATTAAAGGAAGTAAAATTTTGAGTCAGGGAGGTCTTGTACAGAAGATGGTGTTTATTGTGCGTGGAAAATTGGAGAGCATCGGAGAAGATGGTATTCCGGTTCCGTTAACCGAAGGGGATGCTTGTGGTGAAGAACTTCTAAGATGGTATCTTGAACAGTCTTCTGAAAGCAAAGAAGGTAAAAAAGTAAAGCTTCAAGGACAAGGGTTGACTAGTGATAGAACAGTAAGATGCTTAACCAATGTAGAGGCATTTTCACTCCGCACTAAAGACATTGAAGAAGTCACAATTCTTTTCGCAAGATTCTTGCGGAGCCCTCGTGTTCAAGGAGTCATAAGGTATGAATCACCATACTGGAAATCACTTGCAGCAAACAGAATTCAGGTTGCATGGAGATACAGGAAGAAGCGTCTAAATCGAGCAACTACCACATGA 2280 0.4018 MNHVDKDESPMLSETRTQRSDEPQDSTFRRNISRIQSASISIPMDSLDPYERQPNLVGHTGPLRTARKTLLGQMSCPLYATPATGNPFQNSIVVAGSKVGENKTDKFDGTDEHRWNDNDYDKKNKRLLRSGQLGMCNDPYCTTCPTYFKFSQERKPRSSTIFDPEFHNSLYGDAKGFGRKLLSFCSSCIPGVMNPHTKVVQHWNQFLAISCILSIFVDPLFFFLIYVNKRDKCILINWDMAKILIVLRSITDFVYFLNILLQFRLAYISPESRVVGAGDLVDHPMKIARNYFKSYLGVDLFVVVPLPQIMILVVLPSSLGNSGANYAKNLLRLAILIQYIPRLFRYLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACKHSLLPDCMKLIDCKAESISTKWINDEGASACLNSSSDAFAYGIYDKAVHLTIETNLIKKYVYALFWGFQQISTLAGNQTPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQSLGRRRLEMQLRGRDVEQWMNHRRLPEDLKRRVRQAERYSWAATRGVPEKMVLENLPEDLQTDIRRHLFKFVKSVRIFSLMDEDEPILDAIRERLIQTTYIKGSKILSQGGLVQKMVFIVRGKLESIGEDGIPVPLTEGDACGEELLRWYLEQSSESKEGKKVKLQGQGLTSDRTVRCLTNVEAFSLRTKDIEEVTILFARFLRSPRVQGVIRYESPYWKSLAANRIQVAWRYRKKRLNRATTT* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5193 759 Gene3D - 206 517 - -
Tpr2g5193 759 SUPERFAMILY Voltage-gated potassium channels 195 520 - -
Tpr2g5193 759 Gene3D Helix hairpin bin 519 584 - -
Tpr2g5193 759 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 758 - -
Tpr2g5193 759 ProSiteProfiles cAMP/cGMP binding motif profile. 594 662 IPR000595 -
Tpr2g5193 759 CDD CAP_ED 592 710 IPR000595 -
Tpr2g5193 759 MobiDBLite consensus disorder prediction 1 27 - -
Tpr2g5193 759 SUPERFAMILY cAMP-binding domain-like 520 711 IPR018490 -
Tpr2g5193 759 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 758 - -
Tpr2g5193 759 Gene3D Jelly Rolls 590 716 IPR014710 -
Tpr2g5193 759 Pfam Ion transport protein 203 520 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5193 Tpr-Chr2 58230189 58239268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5193 2 670 Ion Channels AT3G17700 58.088 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5193 K05391 - ccaj:109789004 1121.69