Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5192 ATGAATCGTTTTGATAAAGATGAAATTCCGATGCTGTCAGATACACGTACACAACGATCTGATGAACCTCAGGATTCTACATTCCGAAGAAACATATCAAGGACACGGAGTGCTTCAATCTCTATTCCTATGGCTTCTCTGGATCCATATGAGAGACAGCCGAATCTTGTCGGACATACTGGTCCGCTTCGTACTGCGAGGAAAACTCCGTTGGGGCAAATGAGTGGTCCCTTATATGCAACTCCTGCAACTGGAAATCCTTTTCAGAATAGTATAGTAGTGGCAGGAAGCAAAGTAGGAGAGAACAAGACAGAGAAGTTTGATGGCACAGATGAACATCGTTGGAATGATAATGACTACGACAAAAAAAATGAGCACTTGTTGAGGTCTGGACAACTTGGAATGTGTAATGATCCTTATTGCACTACTTGCCCTACTTACTTCAAGCTTTCTCAGCAAAGAAAACCAAGAGCTTCCACTATATTTGACCCCAAGTTCCACAATTCTCTTTATGGCGACGCCAAAGGTTTTGGAAGAAAACTTATTTCTTTCTGCTCTTCATGCATTCCTGGAGTTATGAACCCTCATACTAAAGTTGTACAACACTGGAACCGGTTTTTGGCCATATCTTGCATACTCTCAATTTTTGTTGATCCATTATTTTTCTTCTTAATATATGTGAACAAGCGTGATAAATGTATTCTTATCAACTGGGATATGGCAAAAATACTTGTTGTACTTCGAAGCATAACTGATTTTGTGTATTTCTTGAACATTCTTCTCCAGTTTAGGTTGGCTTATATTTCTCCTGAATCAAGGGTGGTTGGTGCTGGAGATTTAGTTGACCATCCCATGAAAATTGCTCTTAATTACTTTAGGAGTTATCTTTGCGTTGACTTATTTGTTGTATTACCTCTTCCTCAGATAATGATATTGGTTATCCTACCAAGTTCCTTGGGGTATTCAGGAGCAAATTATGCTAAGAATCTTCTACGTCTAGCGATCCTTATACAATACATTCCCAGATTATTCAGATATTTGCCTCTGCTAATTGGCCAGTCTCCAACTGGATTCATATTTGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTCATTTTTATGCTATCTGGCCATGTTGTTGGTTCATGCTGGTACCTCTTTGGTCTACAGAGGGTTAACCAATGTTTGAGAGATGCCTGCAAACATTCTCTTCTACCTGAATGCATGAAGTTGATTGACTGTAAAGCGGAGAGTATATCAACTAAATGGATCAATGATGAGGGTGCCATTGCTTGTTTGGATTCCTCATCCAATGCTTTTTCTTATGGAATCTATGAAAAAGCTGTACAACTTACTATAGAAACTAACCTGATCAACAAATACGTGTATGCACTTTTTTGGGGATTCCAGCAAATCAGTACTCTAGCTGGTAATCAAATCCCAAGCTATTTTGTGTGGGAAGTCCTCTTTACAATGTCTATCATAGGATTGGGACTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGTTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGATCTCAAAAGGAGAGTACGGCAGGCTGAACGGTATAGTTGGGCTGCAACAAGGGGTGTTCCTGAGAAAATGGTTCTCGAGAATTTGCCAGAAGATCTCCAGACAGACATACGACGTCATCTCTTCAAATTCGTTAAAAAGGTTCGAATATTTTCCCTGATGGATGAAGATGAGCCTATCTTAGATGCCATTCGTGAACGACTAATACAGACAACATACATCAAAGGAAGTAGAATTTTGAGTCAGGGTGGTCTTGTACAGAAGATGGTGTTTATTGTGCGTGGAAAATTGGAGAGCATCGGAGAAGATGGGATTTCGGTTCCGTTATCTGAAGGGGATGCGTGTGGTGAAGAACTTCTAAGATGGTATCTGGAACAGTCATCTGAAAGCAAAGAAGGTAAAAAAGTAAAGCTTCAAGGACAAGGGTTGACCAGTGACAGAACAGTAAGATGCTTAACCAATGTGGAGGCATTTTCACTCCGCACTAAAGACATTGAAGAAGTGACAACTCTTTTCGCAAGATTCTTGAGGAGCCCTCGTGTTCAAGGAGTCATAAGGTATGAATCTCCATATTGGAGATCACTTGCAGCAAACAAAATTCAGGTTGGATGGAGATACAGGAAGAAGCGTCTAAGTCGAGCTAATACCACACAGAATGATTATCAAACATCGAAATCATAG 2307 0.404 MNRFDKDEIPMLSDTRTQRSDEPQDSTFRRNISRTRSASISIPMASLDPYERQPNLVGHTGPLRTARKTPLGQMSGPLYATPATGNPFQNSIVVAGSKVGENKTEKFDGTDEHRWNDNDYDKKNEHLLRSGQLGMCNDPYCTTCPTYFKLSQQRKPRASTIFDPKFHNSLYGDAKGFGRKLISFCSSCIPGVMNPHTKVVQHWNRFLAISCILSIFVDPLFFFLIYVNKRDKCILINWDMAKILVVLRSITDFVYFLNILLQFRLAYISPESRVVGAGDLVDHPMKIALNYFRSYLCVDLFVVLPLPQIMILVILPSSLGYSGANYAKNLLRLAILIQYIPRLFRYLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACKHSLLPECMKLIDCKAESISTKWINDEGAIACLDSSSNAFSYGIYEKAVQLTIETNLINKYVYALFWGFQQISTLAGNQIPSYFVWEVLFTMSIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLKRRVRQAERYSWAATRGVPEKMVLENLPEDLQTDIRRHLFKFVKKVRIFSLMDEDEPILDAIRERLIQTTYIKGSRILSQGGLVQKMVFIVRGKLESIGEDGISVPLSEGDACGEELLRWYLEQSSESKEGKKVKLQGQGLTSDRTVRCLTNVEAFSLRTKDIEEVTTLFARFLRSPRVQGVIRYESPYWRSLAANKIQVGWRYRKKRLSRANTTQNDYQTSKS* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5192 768 Pfam Ion transport protein 203 520 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Tpr2g5192 768 ProSiteProfiles cAMP/cGMP binding motif profile. 594 662 IPR000595 -
Tpr2g5192 768 CDD CAP_ED 592 710 IPR000595 -
Tpr2g5192 768 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 759 - -
Tpr2g5192 768 Gene3D Jelly Rolls 590 716 IPR014710 -
Tpr2g5192 768 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 759 - -
Tpr2g5192 768 MobiDBLite consensus disorder prediction 1 46 - -
Tpr2g5192 768 Gene3D - 197 517 - -
Tpr2g5192 768 SUPERFAMILY Voltage-gated potassium channels 195 520 - -
Tpr2g5192 768 Gene3D Helix hairpin bin 519 584 - -
Tpr2g5192 768 SUPERFAMILY cAMP-binding domain-like 520 713 IPR018490 -
Tpr2g5192 768 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5192 Tpr-Chr2 58215742 58239279 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5192 5 670 Ion Channels AT3G17700 59.527 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5192 K05391 - ccaj:109789004 1150.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5192 2 58215742 58239279 Tpr2g5192 2 58215742 58239279 ECH