Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5191 ATGGATTTTGGATCACCTTCTTCATTCACTTACGATGTTTTCATCAGTTTCAGAGGCACTGATACTCGTTTTGGTTTTACCGGCTATCTCCACAAAGCTCTTTCTGATAAAGGAATCCGCACTTTCATTGATGACAAGAACCTTCAAAGAGGTGACGAAATCACACCATCACTTATCAAAGCCATTGAAGAGTCTATGATATTCATTCCTGTGTTCTCTATCAACTATGCTTCTTCTTCGTTTTGCCTTGACGAACTTGTCCACATCATTCATTGCTTCAAGGAAAAGAAGGGTCGCAAAATTTTGCCTGTTTTCTACAATGTTGATCCTTCTCACGTGCGGCATCAGAATGGAAGTTATGGTGAAGCATTGGCTAAGCATGAAGAGTTGATAAAAAATAACAAGGAAACGTCCATATGTTACACAGAGAGGTTGAAGAATTGGAAAATGGCTCTTTACCAAACTGCTAACTTGGCTGGCCACCATTTCAGTCATGGGAATGGATATGAATATGAATTCATTGGAAAGATAGTTACAGAGGTGTCAAACAGGATCAATCGTGCTCCTTTACATGTTGCAGATCACCCCGTTGGATTGGAGTCTCGAGTATTAAAAGTGAAGTCACTTCTAGATGTTGACTCATCTAACGATGAAGTCCGCATGATAGGAATCTGTGGGATTGGTGGCATAGGTAAAACAACACTTGCTCGAGCCATTTACAATTTGATTTCTTACCAATTTGAAGTTTCGTGTTTTCTTCACAATGTGAAAGAACATTCAGCTAAACATGGCCTAGAACATGTCCAAGAGGAACTTCTTTCAAAAACAGTTGAATTGAATCATAAGTTAGGAGATGTTTCTGAGGGAATTCCTATCATAAAACAAATGCTACAAGATAAGAATGTTCTATTGATTCTCGATGATGTAGACGAACTGAAGCAGCTGCAGGTTCTGGCTGGAGGGCTTGACTGGTTCGGTCCTGACAGCAAAGTCATCATTACCACTCGAGACAAACAATTGCTAACCAGTCATGGGGTTGAAATAACATATGAAGTAGATGAGTTAAATGTGGATGAAGCTCTTGAATTGTTGACGTGGAAGGCATTTAAAAATAACAATGTTGATTCAAGTTACAAGTACATTTTACGACGTGCAGTAAGTTACGCTTCTGGCCTACCATTAGCTTTAGAAGTAGTGGGTTCCAACTTGTTTGGAATGGATATAGGAGAATGGGAATCTATATTAGATCGGTATGAAAGGATCCCGAATAAAGAGATTCAAAAGATACTTAAAGTAAGCTTTGATTCTTTGGAAAAAGATGAGCAGAGTGTCTTTCTCGACATTGCTTGTTGCTTCAATGGGTATAAGATGACAGAGATCAAAGATATACTTCATGCTCATTACGGTCATAACATCAAATATCACATTAGAGTGTTGGTTAACAAATCTCTTATACAGATTAGTTGGCACGGGCAAAGTTATAGTTGGACAGTACATGACTTGATAGAGCACATGTGTAAAGAAATTGTCCGACTAGAATCTCCTGAAGATCCTGGAGAACGCAGTAGGTTGTGGTCGGAAGAAGATATAGTTCAAGTTTTAGAAGAAAATACGGGAACAAGTAGAATTGAAATTATATGTATGGATGACCTGTCGTTAGATGTTAGAGACGTAAGAGTAGCATGGAAGGGAGATGCTTTCAAGAAGACAAAAAACCTCAAAACTTTGATTATTAAAAGTGGCATCTTTTCCAAAGGTCCTAAACATCTTCCAAATAGTTTGAGATTTCTAGAATGGCACAGATATCCTTCACAGGATATACCATCTGATTTTTGTCCGAAGAAACTTTCTGTATGTAAGCTACCTAGAAGTTTGCTTAAATCATTTGAGTCGCCTTCCTCATTGAAGAGGTTCATAAATATGAAGGAGTTAAATTTGGACTACTGTGGAAGTCTAAAACGGATACTTGATGTATCTGGTCTTCAAAATTTAGAAATATTCTCAATAAAAAAATGTATAAATTTGATTGAAATCCACCATTCTATTGGTTTCCTGAGTAAACTTCAAATCCTAGTTGCTGAAGGTTGCTGCAAGCTTAGGAGTTTTCCGTCCATGAAGTTAACTTCTCTTTATCAACTGGATCTTTCATCTTGTGCGAGTCTCAAGAGTTTTCCAGAAATATTAGAAGAGATGGAAAATATAGCATCACTTGTATTGGTGGGAACTTCAATAGAAGAGTTGCCATTTTCATTTCACAATCTCACTGGGCTTCATAGTTTACAAATAGAGGCACGCGGAATACTTAAGTTGACTAATAGTATTATCATGATGCCAAAATTGTTGTGGATTACTATTAAGGGAGGTCTATTATTGCCAAACCAGAATGTTAAACTGAATTCTATGATGTCTTCAAATGTGCAAAAACTTCAGCTCATAGAATGCAACTTGTCCGAAGAATCTCTTGCAATGCTTCTCATGTGGTTTACTAATGTGAAATATTTAAATCTGTCGGGGAGTAATGTCACAATTCTTCCAGAATGCATCAAAGAGTCTCACTTTTTAAGGCGGCTATATTTGGATGATTGCAAATGGCTTCGAGAAATTAGAGGCGTTCCACCAAATTTGAAACATTTATCTGCATTACGCTGCAAATCATTGACTTCCTCATGCAGGAGCATGCTACTAAATAAGGAACTACATGAGGCTGGAAAAACGAACTTTCGTATGACAGGAAAAGAAAGTATTCCAGAGTGGCTTGAGCACCGAAGCATAGGACAGTCAATTTCTTTCTGGTTTCGGAACAAGCTCCCTGCTGTTGTTGTCTTCTTTGTCATTAAATCGATGCATAAAAAGCACTCACTCAATGAATTTCTTTCATTAAGACCCAACTTTTTCATCAATGGCTATGAATGTCAATGTGGTCTTAGCCATGGGAGTAATATCGGAGTAGAACTGGAAAATACGTATCTATATGATCTTCAACTGGAGGACATGAGATTCAATTCTATACTACACAATGCACTTAAAAAAAATGAATGGATCCATGTGGAGATTATGTGTGTGTCTTCAAAGATGATATCACTCCTTACAGAATTTGGAATCCATGTATTAAATCAGAAAAGTAGCATGGAGGATATTCAATTCAAAAATCCTTGCAAAAAGAGAAAGTTATTATTGGATGATAATGTCGATGATCATTATTCACAATGA 3210 0.3723 MDFGSPSSFTYDVFISFRGTDTRFGFTGYLHKALSDKGIRTFIDDKNLQRGDEITPSLIKAIEESMIFIPVFSINYASSSFCLDELVHIIHCFKEKKGRKILPVFYNVDPSHVRHQNGSYGEALAKHEELIKNNKETSICYTERLKNWKMALYQTANLAGHHFSHGNGYEYEFIGKIVTEVSNRINRAPLHVADHPVGLESRVLKVKSLLDVDSSNDEVRMIGICGIGGIGKTTLARAIYNLISYQFEVSCFLHNVKEHSAKHGLEHVQEELLSKTVELNHKLGDVSEGIPIIKQMLQDKNVLLILDDVDELKQLQVLAGGLDWFGPDSKVIITTRDKQLLTSHGVEITYEVDELNVDEALELLTWKAFKNNNVDSSYKYILRRAVSYASGLPLALEVVGSNLFGMDIGEWESILDRYERIPNKEIQKILKVSFDSLEKDEQSVFLDIACCFNGYKMTEIKDILHAHYGHNIKYHIRVLVNKSLIQISWHGQSYSWTVHDLIEHMCKEIVRLESPEDPGERSRLWSEEDIVQVLEENTGTSRIEIICMDDLSLDVRDVRVAWKGDAFKKTKNLKTLIIKSGIFSKGPKHLPNSLRFLEWHRYPSQDIPSDFCPKKLSVCKLPRSLLKSFESPSSLKRFINMKELNLDYCGSLKRILDVSGLQNLEIFSIKKCINLIEIHHSIGFLSKLQILVAEGCCKLRSFPSMKLTSLYQLDLSSCASLKSFPEILEEMENIASLVLVGTSIEELPFSFHNLTGLHSLQIEARGILKLTNSIIMMPKLLWITIKGGLLLPNQNVKLNSMMSSNVQKLQLIECNLSEESLAMLLMWFTNVKYLNLSGSNVTILPECIKESHFLRRLYLDDCKWLREIRGVPPNLKHLSALRCKSLTSSCRSMLLNKELHEAGKTNFRMTGKESIPEWLEHRSIGQSISFWFRNKLPAVVVFFVIKSMHKKHSLNEFLSLRPNFFINGYECQCGLSHGSNIGVELENTYLYDLQLEDMRFNSILHNALKKNEWIHVEIMCVSSKMISLLTEFGIHVLNQKSSMEDIQFKNPCKKRKLLLDDNVDDHYSQ* 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5191 1069 SMART till_3 10 158 IPR000157 GO:0007165
Tpr2g5191 1069 Gene3D Ribonuclease Inhibitor 548 916 IPR032675 -
Tpr2g5191 1069 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 448 IPR027417 -
Tpr2g5191 1069 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 160 IPR035897 -
Tpr2g5191 1069 PANTHER ARCHAEAL ATPASE 21 1020 - -
Tpr2g5191 1069 ProSiteProfiles TIR domain profile. 9 185 IPR000157 GO:0007165
Tpr2g5191 1069 SUPERFAMILY L domain-like 559 892 - -
Tpr2g5191 1069 Gene3D - 185 348 IPR027417 -
Tpr2g5191 1069 SMART AAA_5 218 358 IPR003593 -
Tpr2g5191 1069 Gene3D - 434 509 IPR036388 -
Tpr2g5191 1069 Gene3D - 354 433 IPR042197 -
Tpr2g5191 1069 PRINTS Disease resistance protein signature 221 236 - -
Tpr2g5191 1069 PRINTS Disease resistance protein signature 296 310 - -
Tpr2g5191 1069 PRINTS Disease resistance protein signature 389 403 - -
Tpr2g5191 1069 PRINTS Disease resistance protein signature 705 721 - -
Tpr2g5191 1069 SUPERFAMILY "Winged helix" DNA-binding domain 424 535 IPR036390 -
Tpr2g5191 1069 Pfam NB-ARC domain 205 436 IPR002182 GO:0043531
Tpr2g5191 1069 Pfam TIR domain 11 187 IPR000157 GO:0007165
Tpr2g5191 1069 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 1020 IPR044974 GO:0006952
Tpr2g5191 1069 Gene3D - 10 184 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5191 Tpr-Chr2 58207449 58212891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5191 7 791 WRKY Transcription Factor Family AT4G12020 29.643 1.48e-73 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5191 - - mtr:MTR_6g075690 1115.91