LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g5190	ATGCAAGCTTCAGCTGCGGCAATCGTAGCGTTGACAGAACCTTCTAACGTGCGACATCAGACTGGAAGTTATGGTGAAGCATTGGCTAAGCATGAGGAGAGGTTTCAAAATAACAGCGAAAAGGACAAAAATAATAACATGGAGAGGCTGCATAAATGGAAGATGGCTCTTAACCATGCAGCTAACTTGTCCGGCTACCATTTCAATCCTAGGAATAATGGATATGAATACGAGTTTATTCAGCAAATAGTCAGATTTATATCCAACCAGATAAATCGCGTTCCTTTACATGTTGTTGATTACCCTGTTGGCTTGCAGCGGCAAGTCCTAAAAGTATATTCACTTCTAGATGTTAGATCTAATGATGAAGTCAAGGTGGTAGGGATCTATGGGCCTGGAGGAATGGGCAAGACAACACTTGCCAAAGCAGTTTATAATTTCATAGCTGATCAATTTGAATGTGTGTGTTTTCTTCACAATGTGAGAGAAAATTCATCTAAACATGGTTTAGAACATCTCCAAAATGATTTGCTTTCCCAAACAGTTGGATTTGAATTTAAGTTAAGAAATAGCAGTGAGGGAATTTCAACCATAAAGCAAAGGCTACAGCGAAAAAAGGTTTTATTAATTCTCGATGATGTTGACGAATTGAAGCAACTGCAGGCTTTGGTTGGTGGGCTTGATTGGTTTAGTGTTGGTAGTAGAGTGATCATTACCACTCGAGACAAACACTTGCTAGCAAGTCATGGTATTGACGTAACATATGAAATACGTGAGTTAAATAAGAAAGAAGCTTTGGAATTGCTTAGGTGGAAAACTTTTAAAGGTAAGCAAGTTAATTCAAGTTACGAGCATGTTTTAAAACGTGCAGTAAATTATGCTTCTGGGCTTCCATTGGCGTTGGAAATATTAGGTTCCAACTTATTTGGAAAGCATATAGAAGAATGGAATTCTTTGTTGGATCGATATGAAAGGATTCCTAATAAAGGGATTCAAAAGATACTTAAAGTGAGTTTTGATGCTTTGGAGGAAGATGAGCAGAGTGTTTTTCTCGACATTGCTTGTTGCTTTAAAGGGTATAAATTAAAAGAGGTGGAAGATATACTTTGTGCTCATTACAGTCAATGCATGAAATATCATATTGGAGTCTTGGTTGAAAAATCTCTTGTAAAGATTAGTCGACGGGGCTATGTGAGATTACATCATGACTTGATAGAAGACGTGGGTAAAGAAATCGTAAGAACAGAATCACCAAAAGATCCTGAAAAACGTAGCAGGTTGTGGTTCCGAGAAGATATATTTCAAGCTTTTGAAAAAAATTCAGGAAGTCAAGTTGAAATGATACATTTGGAATTTCCATTGCCTGAAAAAATAGAAGAATGGAAAGGAGATGAATTCAAGAAGATGGAAAACCTAAAAACTCTTACTATTAAAAATAGTAGTTTTGTTTCCAAACCTCAAGTACAGCTTCCTAATTGTTTAAGAGCACTAGAATGGCCTAGGTATCCTTCACAACACATACCATCTGATTTTCGTCCGAAGAATCTTTCCATATGCAAGTTACCCAATAGTGACCTCACATCATTTACTTTGGCTAACTCATTGAAGGAAAGGATGTTCTTGTGTATGAAAGTTTTACATTTAGACGATTCTAAATGTTTAACAGAAATAAGTGATGTATCTGGTCTCCAAAATTTAGAAGAATTTTCATTTCAAAGGTGTGAGAATTTACTTACAATTCATGATTCTGTTGGGTTCTTGTATAAACTAAAAATCTTGAATGCTGAAGGTTGTAGCAAGCTCAGAAGATTTCCACCAATTCAATTACCCTCTCTTCAAAAACTTGAACTTTCATTTTGTAAAAGTCTTAAGAACTTCCCAGAAATATTGGGAAAGATGGAGAGCATACAAACAATTTGTTTTAGAGAAACTTTAATTGAAGAATTGCCTGATTCATTTCAACATCTCACTAAGCTTATTCAATTAGTGCTACTAGTAGCAGAAGCACATCAACTATTGATTAGGATACCAAGTAGCATTCTCATGATGCCAAAATTGAATAAGCTTCGTCTTTGTGGCTATCATTTATTGCCAAACCAGAGTGATAAACCAAGTTCCATGGTGTCCTCAAAAGTAAAGTATCTCCGGCTAGATGAATGCAAACTAAAAGATGAATATCTTCCGATAATTCTCAAGTTGTTTGCTAATTTGACACACTTAGACTTGTCATTGAGTAATTTTACAATTCTTCCGGAATGCATCAAAGAACATCAGTCTTTAATCAGCCTCAATCTGGATGATTGCACGCGTCTTCAAGAAATTCGAGGGATTCCGCCAAATTTAAAATTCTTGTCTGCATTAAATTGTGAATCGTTGAGTTCCTCATGCACAAGCATGCTATTGAATCAGGAACTGCATGAAGTTGGAGGCACCATCTTTTGTTTGCCAGGAAAAAGGATTCCAGAGTGGTTTGAGCTCCAAAGTAGGGGATGGTCATTTTCTTTCTGGATTCGTAACAGTCTCCCTTCCATTTCTCTCTTATACACTACTGAATCGATAATTCAGAAGAGTTGCTTGGGTCGATTTTGTTTACCCGTTGCCCAACTATACATCAATCGCCGTGAATGCACTTTTGACGATCCATTGAAAGGCGATTATATATGGATAAAATCAGATCACACATATCTACTTAATTTGAACCTACAAGACATGGTAGGATTGGATGAAACATTTTTGAAAAATGAATGGAATCGTGCAGATGTTTTGATCAATCCATTACGCTTTAGGAAAAGTCAAATGCACATATTCAAACAAGAGAGTAGCATGGATGATATTCAATTCTCCGATCCTTACAAAAAAAGAGAATTAGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGTTTTTTATGATGCTGATGATGTTCTTGATGGTGATGATCACAAAACCACCCATTGTAATGCCTGA	2979	0.3632	MQASAAAIVALTEPSNVRHQTGSYGEALAKHEERFQNNSEKDKNNNMERLHKWKMALNHAANLSGYHFNPRNNGYEYEFIQQIVRFISNQINRVPLHVVDYPVGLQRQVLKVYSLLDVRSNDEVKVVGIYGPGGMGKTTLAKAVYNFIADQFECVCFLHNVRENSSKHGLEHLQNDLLSQTVGFEFKLRNSSEGISTIKQRLQRKKVLLILDDVDELKQLQALVGGLDWFSVGSRVIITTRDKHLLASHGIDVTYEIRELNKKEALELLRWKTFKGKQVNSSYEHVLKRAVNYASGLPLALEILGSNLFGKHIEEWNSLLDRYERIPNKGIQKILKVSFDALEEDEQSVFLDIACCFKGYKLKEVEDILCAHYSQCMKYHIGVLVEKSLVKISRRGYVRLHHDLIEDVGKEIVRTESPKDPEKRSRLWFREDIFQAFEKNSGSQVEMIHLEFPLPEKIEEWKGDEFKKMENLKTLTIKNSSFVSKPQVQLPNCLRALEWPRYPSQHIPSDFRPKNLSICKLPNSDLTSFTLANSLKERMFLCMKVLHLDDSKCLTEISDVSGLQNLEEFSFQRCENLLTIHDSVGFLYKLKILNAEGCSKLRRFPPIQLPSLQKLELSFCKSLKNFPEILGKMESIQTICFRETLIEELPDSFQHLTKLIQLVLLVAEAHQLLIRIPSSILMMPKLNKLRLCGYHLLPNQSDKPSSMVSSKVKYLRLDECKLKDEYLPIILKLFANLTHLDLSLSNFTILPECIKEHQSLISLNLDDCTRLQEIRGIPPNLKFLSALNCESLSSSCTSMLLNQELHEVGGTIFCLPGKRIPEWFELQSRGWSFSFWIRNSLPSISLLYTTESIIQKSCLGRFCLPVAQLYINRRECTFDDPLKGDYIWIKSDHTYLLNLNLQDMVGLDETFLKNEWNRADVLINPLRFRKSQMHIFKQESSMDDIQFSDPYKKRELDDDDDDDDDDDDDDDVFYDADDVLDGDDHKTTHCNA*	993

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g5190	992	Gene3D	Ribonuclease Inhibitor	626	808	IPR032675	-
	Tpr2g5190	992	Gene3D	Ribonuclease Inhibitor	436	625	IPR032675	-
	Tpr2g5190	992	Gene3D	-	2	89	IPR035897	-
	Tpr2g5190	992	Gene3D	-	259	343	IPR042197	-
	Tpr2g5190	992	PRINTS	Disease resistance protein signature	126	141	-	-
	Tpr2g5190	992	PRINTS	Disease resistance protein signature	201	215	-	-
	Tpr2g5190	992	PRINTS	Disease resistance protein signature	294	308	-	-
	Tpr2g5190	992	PRINTS	Disease resistance protein signature	607	623	-	-
	Tpr2g5190	992	SUPERFAMILY	"Winged helix" DNA-binding domain	331	437	IPR036390	-
	Tpr2g5190	992	MobiDBLite	consensus disorder prediction	956	978	-	-
	Tpr2g5190	992	Gene3D	-	90	253	IPR027417	-
	Tpr2g5190	992	SMART	AAA_5	123	260	IPR003593	-
	Tpr2g5190	992	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	13	921	IPR044974	GO:0006952
	Tpr2g5190	992	SUPERFAMILY	L domain-like	456	795	-	-
	Tpr2g5190	992	PANTHER	ARCHAEAL ATPASE	13	921	-	-
	Tpr2g5190	992	MobiDBLite	consensus disorder prediction	946	978	-	-
	Tpr2g5190	992	CDD	AAA	129	242	-	-
	Tpr2g5190	992	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	89	353	IPR027417	-
	Tpr2g5190	992	Pfam	NB-ARC domain	111	341	IPR002182	GO:0043531

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g5190	Tpr-Chr2	58198432	58203876	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g5190	44	693	WRKY Transcription Factor Family	AT4G12020	31.495	1.90e-68	249

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g5190	-		-	gmx:100780257	998.038