Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5188 ATGGCTAAGCCCCAATCATTTTCTTCTTCCTTTTCTTATGGATTCATCTTTGATGTGTTCCTCAGTTTTAGGGGCACCGACACTCGCTATGGTTTTATTGGCAATATCTACAAAGCACTACGTGAAGCTGGAATCCACACCTTCATTGATGATAAAGAGCTTCATGGAGGTGACGAAATCACACCAGCACTTGTCAAGGCCATTGAAGAGTCCAGAATTTTCATTCCAGTTTTTTCTGTCAATTATGCTTCTTCTTCGTTTTGTTTGGATGAACTTGTTCACATTATTCATTGTTTTAAGACAAAGGGTTGTTTGGTTTTGCCTATTTTCTATGATGTGGAACCTACTCATGTGCGACATCAGACTGGGAGTTATGGTGAAGCAATAGCTAAACATGAAGTGAGGTTTCAAAATAACAAAGAAAAGTATAATGAAAACATGAAAAGGATGCATAAATGGAAGATGGCTCTTAACCAAGCAGCTCACTTGTCCGGACACCATTTCAATCCTAGGAGTGGATATGAATACGAGTTTATTCCGAAAATAGTCAAATATGTATCCAACAAGATTAATCGTCCTCTTTTACATGTTGTTGATTATCCCGTTGGCCTTCAACGTCGAGTTCTAAAAGTAAATTCACTTCTAGAAGTTGGATGTAATGATGAAGTCAAAATGCTAGGGATCTATGGACCTGGTGGAATGGGTAAGACAACTCTTGCAAGAGCGGTTTATAATGGCATTGCTGATCAATTTGAATGTGTGTGCTTTCTTCACAATGTGAGAGAAAATTCAGCAATTCATGGTTTAGAGGATCTCCAAAAGGATTTTCTTTCCAAAACTGTTGGATTGGACATTAAGTTAGGAGATAGTAGTGAGGGAATTCCAATCATAAAGCAAAGGATACACCGGAAAAAGGTTCTATTGATTCTAGATGACGTTGACGAATTGATGCAGCTGCAGGTTTTGGCTGGAGGGCTTGACTGGTTTAGTGCTGGTAGTAGAGTGATCGTTACCACTCGAGACAAACATTTGCTAGCAAGTCATGACATTGAAGTAACATATGAAATAGATGAGTTTGATAAGGGAGAAGCTCTTGAATTCCTTAGGTGGAAGGCTTTTAAAAGTAAACAAGTTGACTCAAGTTACGAAAACATTTTAAACCGTGCTGTAAATTATGCTTCTGGTTTTCCATTGGCGTTAGAAGTATTAGGTTCCAACTTGTTTCGAAAGCCTATAGAAAAATGGAATTCTTTGTTGGATCAGTATGAAAAGATTCCTAATAAAAAGATTCAAAAGATACTTAAAGTGAGTTTTGATGCTTTAGATGAAAATGAGCAGAGTGTTTTTCTCGACATTGCTTGTTGCTTTAAAGGGTATCATTTGAAAGAGGTGGAAGATATTCTTTGTGCTCACTACGGTCGAGATATGACATATCATATTGGAGTGTTGGTTGAAAAATCTCTTGTAAAGATTATTGAAGATACATTTCATATGGAACCGGACTGTGTGGTATTACATGACTTGATAGAAGACATGGGTAAAGAAATTGTAAGACAAGAATCACCAAAAGAGCCCGGGAAACGTAGCAGGTTGTGGTTCCATGAAGATATATTTCAAGTTTTTGAAGCAAATTCAGAAACAAATCAAGTTGAAATTATACATTTGAGTTTTTCACCACCCGATGAAATAGTAGAATGGAAAGGAGATGAACTTAAGAAGATGAAAAACCTCAAAACACTTGTTGTTGTACCAGTAGATAAGTTCTTTTTCAAACCTCACCATCTTCCTAATAGTTTAAGAGTACTGAAATGGCGTTGGTATCCTTCACAATCTATACCGTCTGATTTTTGTCCGAAGAATCTTTCCATATTCGAGTTACCCAAAAATGACCTTACATCATTTCAGTTGGCTAACTCATTGAAGACAAGGATATTCATTGATTTGAAAGTTTTACATTTAGATGAGAGTGAATATTTAACACAAATAAATGACATATCTAGTCTCCAAAGTTTGGAAGAATTTTCATTTCAAAGGTGTCACAATTTAAGTACAATTCATGATTCCATTGGGTTCCTGAATAAACTTAAAATCTTGAACGCTAAAGGTTGTAGCAAGCTTAGAAGTTTTCCACCAATTTTGTTGCCCTCTCTTCAAAAACTTGAACTTTCATACTGTCAATGGCTTAAGAAGTTCCCAGAAATATTAGGAAAGATTGAAAACATAGAAACAATTCATTTTACAGAAACTCTCATTGAAGAATTGCCCGATTCATTTCAAAATTTCACTGGGCTTCATACGTTAGCAGTATTTGGATATGGAATGTTGAGGCTACCAAGTAGCATTCTCATGATGCCAAAACTGTTAAACATTTATGTCAAAGGTTATCATGTATTGCTTAACCAGATTGATAAATCAAGTTCCATGGTGTCCTCAAATGTAAAATCTCTTGTGCTTAACGGTTGCTACAAATTACAAGATGAATCTCTTCCAATAATTCTCAAGTGGTTTGCCAATGTGACCGAGTTAAACTTATCGAATAGTAATTTCACAATTCTTCCGGAATGCATCAAAGAACATCAATCTTTATGGAGCTTCAATTTGGAAGATTGCAAGTATCTTCAAGAAATTCGAGGGACTCCCCCAAATTTAAAATGGCTGTCTGCATTAAATTGTAAATCTTTGAGTTCCTCATGTAGACGCATGCTACTGAATCAGGAACTGCATAAAGGTGGAGGCACCATGTTTTGTTTGCCAGGAATTGCAGTGATTCCAGAGTGGTTTGAGTATAAAAATAGGGGATCGTCAATTTCTTTCTGGTTTCGTGACAAACTCCCTTCCATTGCTCTCTTTTGTACTACTGAATGGATCTGTGGCATAAACTGTGCTTGTTATTTATCCCCTCCCACGCTAATCATCAATGGCGATGCATGCGCTCTTGACGATCCATGTAGTCATGTTAATATCTACGTAGAACGAAATCATACATATCTATTTCATTTGCAACTAGAAGACAGGGTAGGATTGGATGAAGCAGTTTTAAAAAATCAATGGAACCATGCGAAGGTTACATATACGAATTGGACAATGAAGTCACTCTTTAAGAAAAGTCGAATCCACATATTAAAACAAGAAAGTAGCATGAGGGATTTTCAATTCGAAGATGATGACGACGATGATGATGTAGTTAATGTTTTTTGTGATGATACTGATGATGATGATGATGATGATGATGATGATGTTTTTTATGATGTTGATGATGATAATGTTGCAGATGATGATGATGTTTTTTATGATGTTGATGATGTTCTTGATGATGTTGACCGCTATTTACAATAG 3336 0.3618 MAKPQSFSSSFSYGFIFDVFLSFRGTDTRYGFIGNIYKALREAGIHTFIDDKELHGGDEITPALVKAIEESRIFIPVFSVNYASSSFCLDELVHIIHCFKTKGCLVLPIFYDVEPTHVRHQTGSYGEAIAKHEVRFQNNKEKYNENMKRMHKWKMALNQAAHLSGHHFNPRSGYEYEFIPKIVKYVSNKINRPLLHVVDYPVGLQRRVLKVNSLLEVGCNDEVKMLGIYGPGGMGKTTLARAVYNGIADQFECVCFLHNVRENSAIHGLEDLQKDFLSKTVGLDIKLGDSSEGIPIIKQRIHRKKVLLILDDVDELMQLQVLAGGLDWFSAGSRVIVTTRDKHLLASHDIEVTYEIDEFDKGEALEFLRWKAFKSKQVDSSYENILNRAVNYASGFPLALEVLGSNLFRKPIEKWNSLLDQYEKIPNKKIQKILKVSFDALDENEQSVFLDIACCFKGYHLKEVEDILCAHYGRDMTYHIGVLVEKSLVKIIEDTFHMEPDCVVLHDLIEDMGKEIVRQESPKEPGKRSRLWFHEDIFQVFEANSETNQVEIIHLSFSPPDEIVEWKGDELKKMKNLKTLVVVPVDKFFFKPHHLPNSLRVLKWRWYPSQSIPSDFCPKNLSIFELPKNDLTSFQLANSLKTRIFIDLKVLHLDESEYLTQINDISSLQSLEEFSFQRCHNLSTIHDSIGFLNKLKILNAKGCSKLRSFPPILLPSLQKLELSYCQWLKKFPEILGKIENIETIHFTETLIEELPDSFQNFTGLHTLAVFGYGMLRLPSSILMMPKLLNIYVKGYHVLLNQIDKSSSMVSSNVKSLVLNGCYKLQDESLPIILKWFANVTELNLSNSNFTILPECIKEHQSLWSFNLEDCKYLQEIRGTPPNLKWLSALNCKSLSSSCRRMLLNQELHKGGGTMFCLPGIAVIPEWFEYKNRGSSISFWFRDKLPSIALFCTTEWICGINCACYLSPPTLIINGDACALDDPCSHVNIYVERNHTYLFHLQLEDRVGLDEAVLKNQWNHAKVTYTNWTMKSLFKKSRIHILKQESSMRDFQFEDDDDDDDVVNVFCDDTDDDDDDDDDDVFYDVDDDNVADDDDVFYDVDDVLDDVDRYLQ* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5188 1111 PRINTS Disease resistance protein signature 225 240 - -
Tpr2g5188 1111 PRINTS Disease resistance protein signature 300 314 - -
Tpr2g5188 1111 PRINTS Disease resistance protein signature 393 407 - -
Tpr2g5188 1111 PRINTS Disease resistance protein signature 712 728 - -
Tpr2g5188 1111 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 165 IPR035897 -
Tpr2g5188 1111 Gene3D - 359 442 IPR042197 -
Tpr2g5188 1111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 452 IPR027417 -
Tpr2g5188 1111 CDD AAA 228 341 - -
Tpr2g5188 1111 Pfam TIR domain 17 190 IPR000157 GO:0007165
Tpr2g5188 1111 Pfam NB-ARC domain 213 441 IPR002182 GO:0043531
Tpr2g5188 1111 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 1024 IPR044974 GO:0006952
Tpr2g5188 1111 Gene3D - 13 192 IPR035897 -
Tpr2g5188 1111 Gene3D - 193 353 IPR027417 -
Tpr2g5188 1111 Gene3D Ribonuclease Inhibitor 728 908 IPR032675 -
Tpr2g5188 1111 ProSiteProfiles TIR domain profile. 15 190 IPR000157 GO:0007165
Tpr2g5188 1111 Gene3D Ribonuclease Inhibitor 535 727 IPR032675 -
Tpr2g5188 1111 SMART till_3 16 163 IPR000157 GO:0007165
Tpr2g5188 1111 SMART AAA_5 222 357 IPR003593 -
Tpr2g5188 1111 PANTHER ARCHAEAL ATPASE 27 1024 - -
Tpr2g5188 1111 SUPERFAMILY L domain-like 506 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5188 Tpr-Chr2 58161964 58166675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5188 7 808 WRKY Transcription Factor Family AT4G12020 28.777 2.77e-70 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5188 - - mtr:MTR_6g075690 1093.18