Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5187 ATGGATATTCTCCAATCATCTTGCTCTTTCTCTTATGGATTTACCTATGATGTGTTCCTCAGTTTCAGAGGCACTGACACTCGCTATGGTTTTACTGGAAATCTCTATAGAGCTCTATGTGACGGTGGAGTTCACACCTTCATTGATGATAGGGAGCTTCATGGAGGTGACGAAATCACACAATCACTTGTTAAGGCCATCGAAGAGTCCAGAATTTTCATTCCAGTTTTCTCTATCAACTATGCTTTTTCTTCCTTTTGTTTGGATGAACTTGTCCACATCATTCACTGCTTCAAGGTAAAAGGTTGCTTGGTTTTGCCCATTTTCTATGATGTGGAACCTTCTCACATGCGACATCACACTGAGAGTTATGGTGAAGCAATAGCTAAACATGAAGTGAGGTTTCAAAATAACAAAGAAAAGTATAATGAAAACATGAAAAGGCTGCATAAATGGAAGATGGCTCTTAACCAAGCAGCTAACTTGTCCGGCCACCATTTCAATCCTAGGAATGGATATGAATATGAGTTTATTCGAGAAATAGTAAAATATGTATCCAACAAGATTAATCGTGTTCCTTTATATGTTGTCGATCACCCCGTTGGCTTGCAGTGTCGAGTCCTAAAAGTAACTTCACTTCTAGAAGTTGGATCTAATGATGAAGTCAAGATGCTAGGGATCTATGGACCTGGTGGAATGGGTAAGACAACTCTTGCAAGAGCGGTTTATAATGGCGTTGCTGATCAATTTGAATGTGTGTGTTTTCTTCACAATGTGAGAGAAAATTCAGCAAAACATGGTTTAGAGCATCTCCAAAAGGAATTTCTATCCACAACAGTTGGATTGGACATTAAGTTAGGAGATAGTAGTGAGGGAATTCCAATCATAAAGCAAAGGCTACACCGAAAGAAGGTTCTATTGATGCTCGATGACGTTGACGAATTGAAGCAGCTGCAGGTTTTGGCTGGAGGGCTTGATTGGTTTTGTGTTGGTAGTAGAGTGATCGTTACCACTCGAGACAAACATTTGCTAGCAAGTCATGACATTGAAGTTACATATGAAATAGATGAATTAAATACGAATGAAGCTCTTGAATTGCTTAAGTGGAAGGCATTCAAAAGTAAGCAAGTTGATTCAAGTTATGAGCACATTTTAAACCGTGCAGTAATGTATGCTTCTGGCCTTCCACTGGCGTTAGAAATATTAGGTTCCAACTTATTTGGAAAGAATATAAAAGAGTGGAACTCTTTGTTGGATCGATGTGAAAAGATACCTAACAAAGAGATTCAAAAGATACTTAAAGTGAGTTTTGATGCTTTGGAAGAAGATGAGCAGAGTGTTTTTCTCGACATTGCTTGTTGCTTTAAAGGGTATCAATTGAATGAGGTGGAAGATATTCTTTGTGCTCATTATGGTCAATGCATGAAATATCATATTGGAGTGTTGGTTGAAAAATCTCTCCTAAAAATTTGTTGGCAGGGTTATGTGACATTACATGACTTGATAGAGGTCATAGGTAAAGAAATTGTAAGACAAGAATCACCAAAAGAACCTGGGAAACGCAGCAGGTTGTGGTTCCATGAGGATATATTTCAAGTTTTAGAAGGAAATTCCGGAACAAGTGAAATTGAAATTATACATTTGAATTCACTACCTGAGGAAATAGTAGAGTGGACAGGAAATGAATTCAAGAAGATGAAAAACCTCAAAACACTTGTTATACCAATAAATAAGTTCTTTTTCAAACCTCATCATCTTCCTAATAGCTTAAGAGTACTGATATGGCATTGGTATCCTTCACAATATATACCGTCTGATTTTTGTCCGAAGAATCTTTCCATATGCAAGTTACCCAACAGTGGCCTTACATCATTTAATTTGGCTAACTCGTTGAAGGAAAGGACGTTCTTCGGTATGAAAGTTTTACATCTAGACAATTCTGAATGTTTAACAGAAATAATTGACATATCTAGTCTCAAAAATTTAGAAGAATTTTCATTTCAAAGGTGTGAGAATTTACTTACGATTCATGATTCTGTTGGGTTCCTGAATAAACTTAAAATCTTGAACGCTAAAGGTTGTAGCAAGCTCAGGAGTTTTCCACCAATTCAGTTGCCTTCTCTGCAAAAACTTGAACTTTCATGTTGTTATCGGCTTAATAATTTTCCAAAAATATTAGGAAAAATGGACAACATAGAAGACATTGATTTGATCGGAACTTCCATTGAAGAATTGCCGGATTCATTTCAAAATCTCACTAGGCTTAATGAATTACTATTAGTAGTAGAAGGACATCGAATGTTGATTAGGTTACCAAGCTGGATTCTCATGATGCCAAAATTGTATCACATTTGTCTTTATGGCTATCATGTATTGCCAAACCAGTGTGATAAACCAAGTTCCATGGTGTCCTCAAAACTAAAATCTCTTGGGCTTAGAAAATGCAACCTAACCGATGAATCTCTTCCAATAATTCTCAAGTTGTTTTCTAATGTGACACACTTAGACTTATCGATGACTAATATCACTATTCTTCCGGAATGTATCAAAGAACATCGCTCTTTAAGGAGCCTCCGTCTGGATGATTGCAAATGTCTTCAAGAAATTAGAGGGATTCCGCCAAATTTAAAATACTTGTCTGCATTAAATTGTGAATCTTTGAGTTCCTCATGTAGAAGCATGCTAATAAACCAGGAACTGCATGAAGCTGGAGGAACCATGTTTTCTTTGCCAGGAACTGCATCGATTCCAGAGTGGTTTGAGCACCAAAGTAGGGGATGGTCAACTTCTTTTTGGTTTCGTAACAACATTCCTTCCATTGTTCTCTTCGTCACTAGTAAATTGAAACATGCCGACAGCAGATTACTTTATTCATCAGTTGTTAGTCTTATCATCAATGGCTATAAATTGGATCTTCATTGTCCGTTTGATGGCCTTCTTTACTGGATTTTACTGGATCATACATATCTATTTGATTTGCATCTACAAGACATCGAACCTAGCTGGAAATTAGGCATATCTACACCAGAGGATTACCAGGATCAAAAACCTAAACTGGACAAAGCACTTTTGAAAAATGAATGGAACCATGCAGAGATTACGTGTGAAAATAAGGAGACAATTCCACTCCTTATAGAAATCGGAATCCACGTCTTCAAACAGAAAAGTAACATGGAGGATATTCAATTCACTGATCCTAATAAAAATAGAGAAAATTAG 3219 0.3691 MDILQSSCSFSYGFTYDVFLSFRGTDTRYGFTGNLYRALCDGGVHTFIDDRELHGGDEITQSLVKAIEESRIFIPVFSINYAFSSFCLDELVHIIHCFKVKGCLVLPIFYDVEPSHMRHHTESYGEAIAKHEVRFQNNKEKYNENMKRLHKWKMALNQAANLSGHHFNPRNGYEYEFIREIVKYVSNKINRVPLYVVDHPVGLQCRVLKVTSLLEVGSNDEVKMLGIYGPGGMGKTTLARAVYNGVADQFECVCFLHNVRENSAKHGLEHLQKEFLSTTVGLDIKLGDSSEGIPIIKQRLHRKKVLLMLDDVDELKQLQVLAGGLDWFCVGSRVIVTTRDKHLLASHDIEVTYEIDELNTNEALELLKWKAFKSKQVDSSYEHILNRAVMYASGLPLALEILGSNLFGKNIKEWNSLLDRCEKIPNKEIQKILKVSFDALEEDEQSVFLDIACCFKGYQLNEVEDILCAHYGQCMKYHIGVLVEKSLLKICWQGYVTLHDLIEVIGKEIVRQESPKEPGKRSRLWFHEDIFQVLEGNSGTSEIEIIHLNSLPEEIVEWTGNEFKKMKNLKTLVIPINKFFFKPHHLPNSLRVLIWHWYPSQYIPSDFCPKNLSICKLPNSGLTSFNLANSLKERTFFGMKVLHLDNSECLTEIIDISSLKNLEEFSFQRCENLLTIHDSVGFLNKLKILNAKGCSKLRSFPPIQLPSLQKLELSCCYRLNNFPKILGKMDNIEDIDLIGTSIEELPDSFQNLTRLNELLLVVEGHRMLIRLPSWILMMPKLYHICLYGYHVLPNQCDKPSSMVSSKLKSLGLRKCNLTDESLPIILKLFSNVTHLDLSMTNITILPECIKEHRSLRSLRLDDCKCLQEIRGIPPNLKYLSALNCESLSSSCRSMLINQELHEAGGTMFSLPGTASIPEWFEHQSRGWSTSFWFRNNIPSIVLFVTSKLKHADSRLLYSSVVSLIINGYKLDLHCPFDGLLYWILLDHTYLFDLHLQDIEPSWKLGISTPEDYQDQKPKLDKALLKNEWNHAEITCENKETIPLLIEIGIHVFKQKSNMEDIQFTDPNKNREN* 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5187 1072 Pfam TIR domain 16 191 IPR000157 GO:0007165
Tpr2g5187 1072 SUPERFAMILY L domain-like 510 893 - -
Tpr2g5187 1072 PRINTS Disease resistance protein signature 224 239 - -
Tpr2g5187 1072 PRINTS Disease resistance protein signature 299 313 - -
Tpr2g5187 1072 PRINTS Disease resistance protein signature 392 406 - -
Tpr2g5187 1072 PRINTS Disease resistance protein signature 703 719 - -
Tpr2g5187 1072 SMART AAA_5 221 356 IPR003593 -
Tpr2g5187 1072 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 164 IPR035897 -
Tpr2g5187 1072 CDD AAA 227 340 - -
Tpr2g5187 1072 Gene3D Ribonuclease Inhibitor 534 721 IPR032675 -
Tpr2g5187 1072 Gene3D - 188 352 IPR027417 -
Tpr2g5187 1072 ProSiteProfiles TIR domain profile. 14 189 IPR000157 GO:0007165
Tpr2g5187 1072 Gene3D - 11 187 IPR035897 -
Tpr2g5187 1072 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 1035 IPR044974 GO:0006952
Tpr2g5187 1072 Gene3D - 357 441 IPR042197 -
Tpr2g5187 1072 PANTHER ARCHAEAL ATPASE 26 1035 - -
Tpr2g5187 1072 Pfam NB-ARC domain 219 438 IPR002182 GO:0043531
Tpr2g5187 1072 Gene3D Ribonuclease Inhibitor 722 903 IPR032675 -
Tpr2g5187 1072 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 451 IPR027417 -
Tpr2g5187 1072 SMART till_3 15 162 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5187 Tpr-Chr2 58156811 58160961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5187 10 864 WRKY Transcription Factor Family AT4G12020 29.638 2.42e-79 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5187 - - gmx:100780257 1161.75