Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5183 ATGGAGTATCACAGTGGAGGAAGTGGGTCCCCTGGTGATCATCACCATCATCATCATCACCATGATGGTTCATCTGATTCTCAGAGAAGAAAGAAACGTTACCACCGTCACACTGCTAATCAGATTCAAAGGCTTGAAGCTATGTTCAAGGAATGTCCACATCCTGATGAGAAGCAAAGATTGCAGTTAAGCAGAGAATTAGCTTTGGCTCCTAGACAGATCAAATTTTGGTTTCAGAACAGAAGGACTCAGATGAAGGCACAGCATGAGAGAGCTGATAATTGTCAACTAAGGGCAGAGAATGATAAGATAAGATGTGAGAATATTGCTATAAGGGAAGCCCTTAAAAATGTGATCTGCCCCTCCTGTGGTGGACCTCCAATCAATGATGATTGTTATTTTGATGAACAAAAATTGAGGATTGAAAATGCTCAACTCAAAGAAGAGCTTGATAGAGTATCAAGCATTGCTGCAAAATACATAGGAAGACCAATTTCACAGCTTCCACCAGTAACACCAATTCACATTTCATCATTGGATTTATCAATGGGAAGTTTTGGTGGGCATGGAATGGGAGGAGGACCGTCACTTGATCTTGATCTTTTACCGGGAAGTTCATCAACAATGCAAAATGTTCCGTACCAACCGGCTTGTCTTTCTGAAATGGAAAAGTCGGTAATGTCTGACATTGCGACAAATGCTATGGATGAATTGGTTAGGCTTTTGCAAACTGATGAGCCTTTGTGGATGAAATCAAATACTGATGGAAGAGATATTCTTAATCTTGATACCTATGATAGAATGTTTCCAAAGGCTAATAATCGGTTGAAGAATCCGAATATTCGTACTGAAGCTTCTAGGGATTCCGGTGTTGTTATCATGAATGGCTTAACTTTGGTTGAGATGTTTATGGATCCTAACAAGTGGATGGAGCTCTTTCCTACTATTGTGGCAATGGCAAAGAAAATTGAAGTTATAGCTTCTGGAATGATGGGTGGACACAGTGGTTCTTTGCAACTGATGTATGAAGAGTTGCAAGTGCTGTCACCACTCGTTCCTATTCGAGAATTTTACTTTCTGCGTTACTGTCAACAAATTGAGCAAGGTTTATGGGCAATTGTTGATGTTTCGTACGATTTTCCTCAAGACAACCAATTTGCTCCTCAATTTCGCTGTCATCGTCTTCCTTCTGGCTGCTTCATTCAAGACATGCCTAATGGCTATTCCAAGGTTACTTGGATTGAACATTTGGAAATTGAAGACAAAAATCCAGTTCATAGGCTTTATAGAAATGTTATCTATAGTAGTGCTGCCTTTGGAGCTGAAAGATTTTTGACTACTCTTCAGAGAATGTGTGAAAGGCTTGCTTGTCTTATGGTTTCTGCTAACTCTACTCCCGGTCTCGGTGGAGTGATGCCATCACCTGAGGGAAAAAGGAGTATGATGAAGCTAGCACAAAGGATGGTAACTAATTTCTGTGCAAGCATAAGTGCATCAGCTAGTCATAGATGGACCACACTTTCAGCTTTGAATGAGATTGGAGTCAGAGTAACTGTAAGAAAGAGTACAGATCCAGGTCAATCTGGTGTTGTGCTAAGTGCAGCTACTACCATTTGGCTACCTTTACCTCCACAAACTGTTTTCAATTTCTTCAAAGATGAAAGGAAAAGACCACAGTGGGATGTTCTTTCTAATGGTAATGCTGTTCAAGAAGTTGCTCATATAGCAAATGGTGCACATCCTGGTAACTGCATTTCTGTGCTTAGGGCTTTCAACACAAGTCAGAACAACATGTTGATCCTACAAGAAAGCTGTGTGGATTCATCAGGTTCACTAGTAGTCTATTGTCCGGTTGATTTAACATCTATCAACACAGCAATGAGCGGCGAAGATCCTTCACACATTCCGTTACTCCCCTCCGGTTTCACAATTACATCGGACGGAAACCAATACGATGGCAACAGCAACAATATTCAAAGTGGTGGTGGTGGTAATGGCGACGGAGCATCAACAAGTTCAAACACAAACATAGGAAATAAGTCATCAGGTGGATCATTAATAACAGTTGCATTTCAAATTATGGTAAGCAGTTTACCATCTGCAAAACTTAACATGGAGTCTGTTGCAACTGTTAATGGACTTATTGGTGAGACTGTCCAACACATAAAAGCTGCTTTGAATTGTCCTAGTTCTTGA 2196 0.4062 MEYHSGGSGSPGDHHHHHHHHDGSSDSQRRKKRYHRHTANQIQRLEAMFKECPHPDEKQRLQLSRELALAPRQIKFWFQNRRTQMKAQHERADNCQLRAENDKIRCENIAIREALKNVICPSCGGPPINDDCYFDEQKLRIENAQLKEELDRVSSIAAKYIGRPISQLPPVTPIHISSLDLSMGSFGGHGMGGGPSLDLDLLPGSSSTMQNVPYQPACLSEMEKSVMSDIATNAMDELVRLLQTDEPLWMKSNTDGRDILNLDTYDRMFPKANNRLKNPNIRTEASRDSGVVIMNGLTLVEMFMDPNKWMELFPTIVAMAKKIEVIASGMMGGHSGSLQLMYEELQVLSPLVPIREFYFLRYCQQIEQGLWAIVDVSYDFPQDNQFAPQFRCHRLPSGCFIQDMPNGYSKVTWIEHLEIEDKNPVHRLYRNVIYSSAAFGAERFLTTLQRMCERLACLMVSANSTPGLGGVMPSPEGKRSMMKLAQRMVTNFCASISASASHRWTTLSALNEIGVRVTVRKSTDPGQSGVVLSAATTIWLPLPPQTVFNFFKDERKRPQWDVLSNGNAVQEVAHIANGAHPGNCISVLRAFNTSQNNMLILQESCVDSSGSLVVYCPVDLTSINTAMSGEDPSHIPLLPSGFTITSDGNQYDGNSNNIQSGGGGNGDGASTSSNTNIGNKSSGGSLITVAFQIMVSSLPSAKLNMESVATVNGLIGETVQHIKAALNCPSS* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5183 731 Gene3D - 15 104 - -
Tpr2g5183 731 ProSiteProfiles 'Homeobox' domain profile. 28 88 IPR001356 GO:0003677
Tpr2g5183 731 Pfam START domain 230 454 IPR002913 GO:0008289
Tpr2g5183 731 SUPERFAMILY Bet v1-like 475 720 - -
Tpr2g5183 731 CDD START_ArGLABRA2_like 224 453 - -
Tpr2g5183 731 MobiDBLite consensus disorder prediction 1 38 - -
Tpr2g5183 731 ProSiteProfiles START domain profile. 220 457 IPR002913 GO:0008289
Tpr2g5183 731 SMART HOX_1 29 92 IPR001356 GO:0003677
Tpr2g5183 731 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 22 729 IPR042160 -
Tpr2g5183 731 ProSitePatterns 'Homeobox' domain signature. 63 86 IPR017970 GO:0000981|GO:0006355
Tpr2g5183 731 SUPERFAMILY Homeodomain-like 9 88 IPR009057 -
Tpr2g5183 731 CDD homeodomain 30 89 IPR001356 GO:0003677
Tpr2g5183 731 MobiDBLite consensus disorder prediction 13 38 - -
Tpr2g5183 731 Coils Coil 136 156 - -
Tpr2g5183 731 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 22 729 - -
Tpr2g5183 731 SMART START_1 229 454 IPR002913 GO:0008289
Tpr2g5183 731 Pfam Homeodomain 31 86 IPR001356 GO:0003677
Tpr2g5183 731 SUPERFAMILY Bet v1-like 221 455 - -
Tpr2g5183 731 Gene3D - 228 455 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5183 Tpr-Chr2 58108432 58113206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5183 26 731 Homeobox Transcription Factor Family AT1G73360 65.358 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Tpr2g5183 START 2.7e-48 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5183 K09338 - gmx:100809075 1181.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5183 2 58108432 58113206 Tpr2g5183 2 58108432 58113206 ECH