Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5177 ATGGTTAGGAAGAAGAGAACTGATGGACCTGGTGGTGCTGAATCCTCTGATGGTCAACAGAGGAGTGCGCCTCCTCAACAACAAGCTGCTGTAACTGGAGGTGCAGGACCCCAAGGAGGGGGAGGACCTCAAGGAGGTCGAGGCTGGGCTCCCCAGGGTGGACGTGGGGATTATGGAGGTGGACGTGGTGGTTATGGTGGTGGTCGCGGTGGGCGTGGGATTCCTCAACAGCAGTATGGTGGGCCTCCTGAGTATCAAGGAAGGGGAAGGGGAGGACCTCCACAGCCACAACAGCAGTATGGTGGCCCGCCTGAGTATCAAGGCAGAGGCAGGGGAGGGCCTTCTCAGCAAGGAGGCCGTGGATATGGTGGTGGCCGTGGTGTATACAGTGGTGGTGTGGGTGCTTCTGGTGGCCATGACGTAGTTACTTCATATGGCGGCCCACCGAGGCAACCAGTCCCCGAGCTGCACCAAGCAACCTCAGTTCCATCTGCACCATATCAAGTTGTGGTGTCTCCTCCACCTGCACCCCAATCTGAGGCAAGTTCTTCTCAGCCACCTGAAGTGTCAGAAGTGGGAGAGGAACTGGGACAGATGACAATTCATTCTGAAGAGACTCCTGCTCCTCCTCCTCCTGCAAGTAAATCATCATTGAGGTTTCCCCTTCGACCTGGAAAAGGGAGCACTGGTAAAAGATGTATTGTTAAGGCAAACCATTTCATTGCTGAGTTGCCGAAGAAAGATCTACATCAGTATGATGTGACAATTACCCCAGAAGTGACGTCCAGAGGTGTCAACCGGGCTGTTATGGAGCAGCTTGTGAGGTTGTATCGTGATTCTCACTTAGGAAAGAGACTTCCTGCTTATGATGGCCGCAAGAGCCTCTATACTGCAGGGCCACTCCCTTTTATCTCTAAGGACTTTAGAATCACCCTTGTGGATGAGGATGATGGATCAGGATCCCAAAGGCGGGATAGGGAGTTCAAAGTTGTGATAAAATTGGCTGCACGTGCAGACCTCCACCACCTGGGGCTCTTCTTAGAGGGAAGGCAAACTGATGCACCCCAGGAAGCTCTGCAAGTTCTTGACATTGTTCTCCGCGAGCTTCCTACTTCAAGGTATTGTCCAGTGGGAAGGTCGTTTTATTCACCTGATCTGGGTAGAAGGCAGCCTCTTGGTGAGGGATTGGAAAGTTGGCGTGGTTTCTATCAAAGCATCCGACCCACCCAAATGGGTCTGTCATTGAACATTGACATGTCTTCGACGGCTTTTATTGAGCCATTGCCTGTGATTGAGTTTGTTACTCAGTTGCTGAATAGGGATGTTTCGGCCCGGCCTCTGTCTGATGCTGATAGAGTAAAGATTAAAAAAGCACTTCGTGGCATCAAAGTTGAAGTTACTCATCGTGGTAACATGAGGAGGAAGTATCGTATCTCTGGTCTGACTTCACAAGCTACCAGAGAGTTGACATTCCCCGTGGACGAGAGGGGAACTATGAAGTCTGTTGTTGAGTATTTCTATGAGACATATGGTTTTTCCATTCAACATACTCAATGGCCTTGTTTGCAAGTGGGCAATACACAGAGACCAAACTACCTTCCAATGGAGGTATGCAAGATTGTGGAGGGCCAAAGGTATTCAAAGCGTCTCAACGAGAGGCAGATTACTGCTCTACTAAAAGTCACCTGTCAGCGACCCCTTGATAGGGAACGTGATATCATGCAGACAGTACACCACAATGCATACCACGATGATCCTTATGCTAAAGAGTTTGGAATCAAAATCAGTGATAAACTTGCACAAGTTGAAGCTCGCATCCTTCCGCCACCTTGGCTCAAATATCATGATACCGGTAAAGAGAAGGATTGTCTACCCCAAGTTGGCCAGTGGAATATGATGAACAAAAAAATGGTCAATGGAGGAACAGTCAACAACTGGTTCTGTGTTAACTTCTCTAGGAATGTGCAAGACAGTGTTGCACGGGGCTTTTGCTCTGAACTTGCCCATATGTGTTATGTATCTGGCATGGCATTTAATCCAGAGCCAGTAGTTCCTCCGCTTAGTGCTCGTCCTGACCAAGTAGAAAAGGTTCTGAAAACGCGTTATCATGATGCGAAGAACAAGCTGCAGGGAAGGGAGCTTGACTTGCTCATTGTCATTTTGCCAGATAATAATGGCTCTCTCTATGGTGATCTGAAACGTATATGTGAGACTGACCTGGGGGTTGTTTCCCAGTGTTGTTTAACAAAACATGTATTTAAGATGAGCAAGCAGTACCTTGCAAATGTGGCATTGAAAATCAATGTTAAGGTTGGAGGTAGGAATACCGTGCTTATTGATGCACTTTCACGACGCATTCCACTAGTCAGTGACAGGCCTACCATTATTTTTGGAGCTGATGTTACTCATCCACACCCTGGAGAGGATTCTAGTCCCTCAATAGCAGCTGTTGTTGCTTCTCAAGATTGGCCTGAAGTTACCAAGTATGCTGGTCTAGTTTGTGCCCAAGCTCATCGGCAAGAGCTCATCCAAGACCTCTTTAAACAATGGCAAGATCCAGCCAGAGGAACATTGACTGGTGGAATGATCAAGGAGCTTCTTATATCATTCCGTAGAGCTACTGGACAAAAGCCCCAGCGCATCATATTTTACAGAGATGGAGTGAGCGAGGGACAGTTTTACCAAGTCCTGTTGTTTGAGCTTGATGCAATCCGGAAGGCTTGTGCATCTCTTGAACCCAATTATCAGCCTCCTGTGACTTTTGTGGTGGTCCAGAAACGTCACCATACTAGGCTCTTTGCCAGTAACCACCACGACAAAAGTTCTGTTGATCGTAGTGGCAACATATTACCTGGCACAGTTGTGGATTCTAAGATTTGTCATCCCACTGAGTTTGACTTCTACCTTTGCAGTCATGCTGGTATTCAGGGTACTAGCCGTCCAGCTCATTACCATGTCCTATGGGATGAGAATAATTTCACTGCTGATGCTTTGCAAAGTCTAACCAACAACTTGTGCTACACATATGCTCGATGCACCAGGTCTGTCTCGATCGTGCCTCCTGCATATTATGCTCATTTAGCTGCTTTTCGCGCGAGGTTCTATATGGAACCTGAGACTTCAGACAGTGGGTCTATGACTAGTGGTGCTGTGTCTCGTGGTGGGATGGGAGCTGCAGCAGGACGTAGTACTCGCGCACCTGGAGCTAATGCTGCCGTGAGACCTCTGCCTGCATTGAAAGAGAATGTCAAGAGGGTTATGTTCTATTGCTGA 3273 0.4821 MVRKKRTDGPGGAESSDGQQRSAPPQQQAAVTGGAGPQGGGGPQGGRGWAPQGGRGDYGGGRGGYGGGRGGRGIPQQQYGGPPEYQGRGRGGPPQPQQQYGGPPEYQGRGRGGPSQQGGRGYGGGRGVYSGGVGASGGHDVVTSYGGPPRQPVPELHQATSVPSAPYQVVVSPPPAPQSEASSSQPPEVSEVGEELGQMTIHSEETPAPPPPASKSSLRFPLRPGKGSTGKRCIVKANHFIAELPKKDLHQYDVTITPEVTSRGVNRAVMEQLVRLYRDSHLGKRLPAYDGRKSLYTAGPLPFISKDFRITLVDEDDGSGSQRRDREFKVVIKLAARADLHHLGLFLEGRQTDAPQEALQVLDIVLRELPTSRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVTQLLNRDVSARPLSDADRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFYETYGFSIQHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPLDRERDIMQTVHHNAYHDDPYAKEFGIKISDKLAQVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMNKKMVNGGTVNNWFCVNFSRNVQDSVARGFCSELAHMCYVSGMAFNPEPVVPPLSARPDQVEKVLKTRYHDAKNKLQGRELDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLIDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKQWQDPARGTLTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDKSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAVSRGGMGAAAGRSTRAPGANAAVRPLPALKENVKRVMFYC* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5177 1090 CDD Piwi_ago-like 586 1036 IPR045246 -
Tpr2g5177 1090 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 114 1089 - -
Tpr2g5177 1090 ProSiteProfiles Piwi domain profile. 716 1037 IPR003165 GO:0003676
Tpr2g5177 1090 SUPERFAMILY Ribonuclease H-like 702 1037 IPR012337 -
Tpr2g5177 1090 Pfam Piwi domain 717 1036 IPR003165 GO:0003676
Tpr2g5177 1090 Gene3D - 785 1090 IPR036397 GO:0003676
Tpr2g5177 1090 MobiDBLite consensus disorder prediction 1 225 - -
Tpr2g5177 1090 Pfam N-terminal domain of argonaute 231 366 IPR032474 -
Tpr2g5177 1090 Pfam Glycine-rich region of argonaut 101 207 IPR024357 -
Tpr2g5177 1090 PANTHER PROTEIN ARGONAUTE 1A 114 1089 - -
Tpr2g5177 1090 MobiDBLite consensus disorder prediction 175 189 - -
Tpr2g5177 1090 Gene3D - 606 779 - -
Tpr2g5177 1090 Pfam Argonaute linker 1 domain 376 426 IPR014811 -
Tpr2g5177 1090 CDD PAZ_argonaute_like 427 541 - -
Tpr2g5177 1090 SMART PAZ_2_a_3 432 564 IPR003100 GO:0005515
Tpr2g5177 1090 SMART DUF1785_2 375 427 IPR014811 -
Tpr2g5177 1090 MobiDBLite consensus disorder prediction 13 33 - -
Tpr2g5177 1090 ProSiteProfiles PAZ domain profile. 428 542 IPR003100 GO:0005515
Tpr2g5177 1090 SMART Piwi_a_2 716 1037 IPR003165 GO:0003676
Tpr2g5177 1090 Gene3D paz domain 421 546 - -
Tpr2g5177 1090 Pfam Mid domain of argonaute 625 700 IPR032473 -
Tpr2g5177 1090 Pfam Argonaute linker 2 domain 568 614 IPR032472 -
Tpr2g5177 1090 Pfam PAZ domain 432 557 IPR003100 GO:0005515
Tpr2g5177 1090 SUPERFAMILY PAZ domain 235 579 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5177 Tpr-Chr2 57961790 57969946 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5177 105 1090 Eukaryotic Initiation Factors Gene Family AT1G48410 80.885 0.0 1639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5177 K11593 - gmx:100780375 1738.39