Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5124 ATGGCTTCCATCATTGATGAATATGTGTACGACGTATTCCTTAGTTTCAGAGGCGAGGATACTCGCTATGGTTTCACTGGTAATCTCAAGAAAGCTCTTGTTGACAAAGGAGTCCGTACTTTCATGGATGACGTGGAGCTTCAAAAAGGGGATGAAATCACACCATCACTTCTTAATGCAATTGAAAGCTCCAAAATTGCCATTGTTGTCCTCTCTAAAAATTATGCTGCTTCCTCCTTTTGTTTACAAGAACTTTCTAAGATCCTTGATTCGATGAAAGTTAAGTGTGTTTTGCCGGTTTTTTATAAGGTAGAACCTTCTGATGTACGAAAGTTAGAAAAGACTTATGGAGAAGCAATTGCTAAACATAAGGTCAGTTCCAATCCCAACACGGATAAATGGAAGGCGTCTCTTCACCAAGTTGCTGATTTGTCCGGCTTTCATTACAAGAAAGGGGAGTTGTACGAGTATGAGTTTATTGGGACGATTGTTGAAGAGGTCTTACGAAAGATAAAACTTGTTGCCTTACCTGTTGGTGATTTCTTAGTTGGACTAGAGCCCCAAAAGGAACATGTGACTTCGCTTTTGAATATTGGGTCTGATGATGAAGTCAACATGCTAGGGATCCATGGAATTGGTGGAATAGGAAAAACGACTCTTGCTTTAGCAGTTTATAATTTGATTAGCCATCAATTTCAAGTTTCTTGTTTTCTTGAAAAAGTCAGAGAAAATTCAGACAAAAATGGATTGATTTATCTCCAAAAGATCCTTCTGTCTCAAATTGTTGGAGATAAGAATATTGAGATAACAAGTGTTAGACAAGGAATTTCAGTATTTCAACAGAGGCTCAACCAAAAGAAAGTTCTTTTACTTCTAGATGATGTCGACAATGAGGAGCAATTACAGGCTATTGTTGGAAAATCTGATTGGTTTGGTCTTGGAAGTAGAGTCATCATCACAACTCGGGACAAACGATTACTAACATGTCATGGGGTTGAACGTACATATGAGGTGAAGGGTTTGAATAACAAAGATGCGTTTGAGTTGCTTAGATGGAAAGCTTTTAAAAGTGAAAAGACTAACAAAGATTTGTCAGGTTATGTTCAAGTTTTAGAACGTGCTGTAGCATATGCTTCAGGTCTTCCACTTGCTTTGGAAGTCATAGGTTCTCACTTTTTTAAAAGGACAATAGAGGAATGTAAATGTTCACTAGATCAATGTGAAAGAGTTCTTGATAAAAAGATCCAAGTGACACTGCAGTTGAGCTTTGATGCTTTGGAGAAAGAAGAGAAGTCTGTTTTTCTTGACATTGCCTGTTGCTTGAAAGGATATAAATTGACAACCGTCGAACGAATACTTCATTCTCATCATGGTTATAGCATTAAAAATCATATTAATGTGTTAGTGGAAAAATCTCTCATAAAAATAAGTGAGTCTGGTAATGTGACATTACATGATTTGATAGAGGATATGGGAAAAGATATTGTTAGACAAGAATCTCCGGATCCTGGGGAACGCAGTAGGTTATGGGCCTCTAAAGATATAAATGAGGTTTTAAAAGAAAATAAGGGAACAAGTAAAATTGAAATCATATATTTGGACGGTTGGATTAAAATAGAAAGGGATGGAGAAGCTTTCAAAAAGATGGAAAATCTCAAAACACTGATTATTAACGGGGGTTTTGATGGAAATTTCAAACATCTTCCAAATAGTCTAAGAGTAGTGGATTGGCATTGTCGTTCACCATTTCAATCTTACCCCCGTACATCTAATCAATTTGAGAACGTGGACTTTCTCAAAAATAGTCGAAGCCCACGGGATTGGTATCGCACTGGAACATTTAATCCATTTGCGAAGGTGGACTTTCTCAATAAGAAGTTCCAGAATATGAGAATTTTAAATTTAGATTACGATAGATTACAAATACCTGACCTATCTAATCTCCCAAATTTAGAAGAACTGTCAATTCAAAATTGTTGGAACATCTTTACAATTGATATATCAGTTGGTTTTTTGAGTAATCTTAAAATCTTGAGAATTATAAATTGCAAATATGTCAAAAGTGTTCCACCACTCGATTGCCCTTCCCTGGTAGAACTGGATCTTTCATATTGTTTTAGTCTAGAAAGTTTTCCTCTCACGGTGAATGGATTTGTTGGAAATCTTAAAATCTTGAGGCTTGAAAAGTGCAGCAATATCAGAATTATTCCACTTCACATGTTACATTCTCTAGAAGAACTCAACCTTAATGATTGTACTAGCCTCGAGAGTTTTTCACATGTGGTAGGGTTGGGGGAAAAACTTAAAACAATGAGTTTTAGAAGTTGCATCAACCTAATCAGTATTCCACCTCTCAAGTTGACTTCTCTTGAAAAACTTGATCTTTCGGATTGTACCAGTCTTCATAATTTTCCACTTGTGGTTGACGGGTTTCTTGGAAAACTTAAAACCATGCGTCTTGAAAATTGTCACAATATCAAGAGTATTCCACCTCTGAAGTTGGATTCACTAGAAACACTTGACCTTGCATATTGTTACAGGCTCGAGAGTTTTTTAGTTGGAGTGGACGAATATCTTCTAAATCTTAAAAACTTGTTTGCTACAAATTGTCAAAATTTGAGGTGTATCCCACGTCTCAAGTTGGATTCACTAAAAACACTTGACCTTTCACATTGTTATAGCCTCGAGAGTTTTCCAGGTGCGGTGGATGGGTTGTTGGAAAATATTGAATACTTGAATATTGAACGGTGCATCATGCTTAAAAGTATCCCATCGCTCAGGGTGACTTCGTTGAAAGAGTTCAATCTTTCACATTGTCTAAGTCTACAAAGTTTTCCAGAAATATTGGGAGAAATGACAAATACAACAGAAATTCACTTGGATAATACTCCCATAAAAGAATTGCCTTTTCCATTTCAAAGTCTTATTCCGCCTCAAACATTACGCCCAATGAAATCTTCACATGTAGAATATCTCAGTCTCTGTGACAGCAAACTTTCAGATGAATATTGGGCAATAAGTTTCATGTTGTTTGCTAATTTGAAAGAATTACACCTAGCTAATAATCAATTCACAGTTCTTCCTAAATCCATGGAAAAATGTCATTTTTTACGGAGGCTTGTCTTGGATGATTGTGTGGAACTTCAAGAAATTAAAGGGATTCCTCCTTGCTTAAAAGTGTTATCTGCACTAAACTGCCAATCGTTGACTTTGTCAAGCAAAAGCAAATTACTGAATCAGAAATTACATGAGGCTGGAAACACTTGCTTCCTCTTACCACGAGCAAAGATTCCAGAGTGGTTCGATCACCAATTCTCAGCGGGATTGTCCATTTCTTTCTGGTTTCGTAACAAGTTCCCTGCCATGGTTCTCTGTGTTGTTTCTCCATTGACATGGTGTTTTCACATTACAGTTTTAAGAGTGATCATCAACGGTGATACATTTTTCTATACACCTGATTTGAATGCAAGGAGACCACGGCCGGATACATATCATTTGCATCTTTTTCATATGAAAATGGAAAATTTCAAGGATACTATGGACAAAGCACTTTTAGAAAATAAGTGGAACCATGCAGAGGTTGACTTTGGATTTCCTTTCATGTATAGTGGAATCCATGTATTGAAAGACAAAAGTAGCATCGAGGATTTTCAATTGACCAACCCAGAGATTTAA 3675 0.366 MASIIDEYVYDVFLSFRGEDTRYGFTGNLKKALVDKGVRTFMDDVELQKGDEITPSLLNAIESSKIAIVVLSKNYAASSFCLQELSKILDSMKVKCVLPVFYKVEPSDVRKLEKTYGEAIAKHKVSSNPNTDKWKASLHQVADLSGFHYKKGELYEYEFIGTIVEEVLRKIKLVALPVGDFLVGLEPQKEHVTSLLNIGSDDEVNMLGIHGIGGIGKTTLALAVYNLISHQFQVSCFLEKVRENSDKNGLIYLQKILLSQIVGDKNIEITSVRQGISVFQQRLNQKKVLLLLDDVDNEEQLQAIVGKSDWFGLGSRVIITTRDKRLLTCHGVERTYEVKGLNNKDAFELLRWKAFKSEKTNKDLSGYVQVLERAVAYASGLPLALEVIGSHFFKRTIEECKCSLDQCERVLDKKIQVTLQLSFDALEKEEKSVFLDIACCLKGYKLTTVERILHSHHGYSIKNHINVLVEKSLIKISESGNVTLHDLIEDMGKDIVRQESPDPGERSRLWASKDINEVLKENKGTSKIEIIYLDGWIKIERDGEAFKKMENLKTLIINGGFDGNFKHLPNSLRVVDWHCRSPFQSYPRTSNQFENVDFLKNSRSPRDWYRTGTFNPFAKVDFLNKKFQNMRILNLDYDRLQIPDLSNLPNLEELSIQNCWNIFTIDISVGFLSNLKILRIINCKYVKSVPPLDCPSLVELDLSYCFSLESFPLTVNGFVGNLKILRLEKCSNIRIIPLHMLHSLEELNLNDCTSLESFSHVVGLGEKLKTMSFRSCINLISIPPLKLTSLEKLDLSDCTSLHNFPLVVDGFLGKLKTMRLENCHNIKSIPPLKLDSLETLDLAYCYRLESFLVGVDEYLLNLKNLFATNCQNLRCIPRLKLDSLKTLDLSHCYSLESFPGAVDGLLENIEYLNIERCIMLKSIPSLRVTSLKEFNLSHCLSLQSFPEILGEMTNTTEIHLDNTPIKELPFPFQSLIPPQTLRPMKSSHVEYLSLCDSKLSDEYWAISFMLFANLKELHLANNQFTVLPKSMEKCHFLRRLVLDDCVELQEIKGIPPCLKVLSALNCQSLTLSSKSKLLNQKLHEAGNTCFLLPRAKIPEWFDHQFSAGLSISFWFRNKFPAMVLCVVSPLTWCFHITVLRVIINGDTFFYTPDLNARRPRPDTYHLHLFHMKMENFKDTMDKALLENKWNHAEVDFGFPFMYSGIHVLKDKSSIEDFQLTNPEI* 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5124 1224 Gene3D - 170 333 IPR027417 -
Tpr2g5124 1224 Pfam TIR domain 10 170 IPR000157 GO:0007165
Tpr2g5124 1224 Gene3D Ribonuclease Inhibitor 906 1097 IPR032675 -
Tpr2g5124 1224 SUPERFAMILY "Winged helix" DNA-binding domain 414 520 IPR036390 -
Tpr2g5124 1224 SMART till_3 9 144 IPR000157 GO:0007165
Tpr2g5124 1224 Gene3D Ribonuclease Inhibitor 810 905 IPR032675 -
Tpr2g5124 1224 Gene3D Ribonuclease Inhibitor 719 809 IPR032675 -
Tpr2g5124 1224 ProSiteProfiles TIR domain profile. 8 171 IPR000157 GO:0007165
Tpr2g5124 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 437 IPR027417 -
Tpr2g5124 1224 SUPERFAMILY L domain-like 812 1079 - -
Tpr2g5124 1224 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 881 IPR044974 GO:0006952
Tpr2g5124 1224 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 871 1197 IPR044974 GO:0006952
Tpr2g5124 1224 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 147 IPR035897 -
Tpr2g5124 1224 Gene3D - 9 169 IPR035897 -
Tpr2g5124 1224 PANTHER ARCHAEAL ATPASE 871 1197 - -
Tpr2g5124 1224 PANTHER ARCHAEAL ATPASE 20 881 - -
Tpr2g5124 1224 Gene3D Ribonuclease Inhibitor 460 718 IPR032675 -
Tpr2g5124 1224 Pfam NB-ARC domain 190 410 IPR002182 GO:0043531
Tpr2g5124 1224 Gene3D - 340 427 IPR042197 -
Tpr2g5124 1224 SUPERFAMILY L domain-like 529 848 - -
Tpr2g5124 1224 PRINTS Disease resistance protein signature 206 221 - -
Tpr2g5124 1224 PRINTS Disease resistance protein signature 282 296 - -
Tpr2g5124 1224 PRINTS Disease resistance protein signature 378 392 - -
Tpr2g5124 1224 PRINTS Disease resistance protein signature 879 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5124 Tpr-Chr2 57206698 57219106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5124 766 969 WRKY Transcription Factor Family AT4G12020 29.808 9.82e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5124 - - mtr:MTR_6g079140 1516.52