Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5123 ATGGCTTCCCTCACCGATCGATTCAAATACGATGTTTTTCTTAGCTTTAGAGGCGAAGATACTCGCCACGGTTTCACCGGAAATCTCTGGAAAGCTCTTCAAGACAGAGGAGTCAACACCTTCATTGACGACGAGAAGCTTCGCAAAGGGGAAGAAATCACACTATCACTCGTCAAAGCTATTGAAGACTCCAATATGGCCATCGTTGTGCTTTCCAAGAACTATGCATCTTCTTCCTTTTGCTTACAAGAACTTTCCACGATCCTTGATTGTATAAAAGATAAGGGTAGGTGTGTCTTGCCGGTTTTTTATTTAGTGGATCCTTCTGATGTAAGAAAGTTGAAAAGTTGTTACGGAGAAGCGATGATGGGGCATGAGATGGGGTCCAATAGTAACATAGATCTGTTGAAGAAATGGAAGAATGCTCTTCACCAAGTTTCTAATTTGTCTGGCTTTCATTTCAAAAATAAAGATCGGGATGAATATGAACATGTTTTTATTCAAAAGATAGTTGAACAAGTCTCAAGAGAGATTATACCTGTTACTTTACATGTTCCTGATTACCTAGTTGGACTCAAGGACCAAAAGCTAATTGTAACATCACTTTTGAGTGTTGGGTCTGTTGATACTGTCCACATGGTAGGGATCCATGGGACTGGCGGAATAGGGAAAACCACTCTTGCTCTAGAAGTTTATAATTCGATTGTCCATCGATTTCAAGGGTCCTGTTTTCTTGAAAAAGTCAGAGAAAATTCAGACAAAAATGGGTTGATATATCTACAAAAGATCCTTCTGTCTGAAATTGTTGGAGAGAAGAGCATTGAGTTACCAAGTGTTAGACAAGGAATTTCAATATTACAACAAAGGCTCCACCAAAAGAAGGTTCTTTTACTTCTAGATGATGTTGACAGTGAGGAGCAATTACAGGCTATTGCTGGAAGATCCGATTGGTTTGGTCCAGGCAGTAGAGTCATCATCACAACTCGGGACAAAAGGTTGCTAACATGTCATGGGGTTGAAAGTACATATGAGGTGAAGGGGTTGAATGACAAAGATGCTTTTGAGTTGGTTAGATGGAAAGCTTTTAAAAATAAGTTTAGTCCAAGCTACAACGATTTTTTATTAGTACAAAAGCATACCGGAAAATTGACTGCAAACAAATTGCTTAGATTGAAAACTTTAAATACTGAAAACAAATTTTCAGGTTATGTGCATGTTTTAGAACGTGCCGTAGCATATGCTTCTGGCCTCCCACTTGCTTTGGAAGTCATCGGTTCTCACTTTTTTAATAAGACAATAGAGCAATGTAAATGTGCACTAGATCGTTATGAAAGGGTTCCTGATAAAAAGATCCAAACGACACTACAACTGAGTTTTGATGCTTTGCAAGAAGAAGAGAAGTCTGTTTTTCTTGACATTGCATGTTGCTTCAAACTATATAAATTGACAAGGGTCGAACAAATACTTCATGCTCATCATGGTGATATCATGAAAGATCACATTAATGTGTTAGTGGAAAAATCTCTCATTAAAATAAATGAGTTTGGTGACGTGACATTACATGATTTAGTAGAGGATATGGGGAAAGAAATTGTTAGACAAGAATCACCGGAAGATCCTGGAAAACGCAGTAGGTTATGGGCCTCTAAAGATATAATTCAAGTTTTAGAAGAAAATACGGGAACAAGTAAAATTGAAATCATATGTCCAAACTCCCGGATTGAAGTAGAATGGGATGGAGAGGCATTCAAGAAGATGGAAAACCTCAGAACGCTAATTATTATTGATGGCAAATTTACTGAAAGTCCCAAACATCTTCCGAATAGTCTAAGAGTATTCGCTCATTTTCAAAATCCTTCATGGGATTTACCGTCTGAGTTTTATCCGAAGAAACTTGCCATATGCAATATTCCCTCTGATTCTACATCATTCGAGTGGGGAGACTTTTTCAAGAAGAAGTTCAAGAATATACGGGTTTTAAATTTTGATGGCAATAAATTTTTAACACGGACACCTGATGTGTCTGGCCTCGTACATTTGGAAGAATTTTCATTTCAAGATTGTGAGAATTTAATCACAGTCGATGACTCTGTTGGGTTGCTGGGCAAACTTAAAACCTTGAGAGCTATGTGTTGCATCAAGCTCAGGAGAATTCCGCCTCTCAAGTTGGCTTCTCTAGAAGAACTCGATCTTTCAGGGTGTTCTTGTCTTGAAAGTTTTCCACCTGTGGTAGACGGGTTGCTGGGTAAACTTAAAACCATGAGCCTTAGAAGTTGCATCAAGCTAAGGAGTATTCCACCTCTTAAGCTGACTTCGCTTGAAATATTTGATCTTTCACATTGTTTTAGTCTCGAGACTTTTCCACTTGTTGTGGATAGTTTTCTTGGAAAACTTAAAACCCTGCTTGTTCAAAGTTGTCACAGTCTCAGGAGTATTCCACCTCTCAAGTTGGATTCACTAGAAACACTCGACCTTTCACATTGCTATAGTCTTGAGAGTTTTCCACCTGTGGTAGATGGGTTGGTGGATAAGCTTAAAACCATGAGTGTTAGAAATTGCATCAAAATCAAAATTATTCCACCTCTTGTGTTGGCTTCTCTAGAAGAACTCGATCTTTCAAATTGTACTAGTCTAGAGAGTTTTTCACCTGTGGTAGATGGGTTGATGGATAAGCTTAAAATCATGAATTTTAGAAGTTGCATCAACCTAAGGAGTATTCCACCTCTCAAGTTGGATTCTCTAGAAAAACTTGACCTTTCAAATTGTTATAGTCTCGAGAGTTTTCCACCTGTGGTGGATGGGTTTCTTGGAAAACTTAAAACCTTGCTTGTTACAAGTTGTCACAATCTCAGGAGTATTCCACCTCTCAAGTTGGATTCTTTAGAAGAACTTGATCTTTCATGTTGTTATAGCCTCGAGAGTTTTCCAAGTGTGATGGATGGGTTGTTGGATAAACTTAAATTCTTGAATATTGAACATTGCATCATGCTTAGGAGTATCCCACCGCTCAGGTTAACTTCGTTGGAAAAGTTCAATCTTTCATATTGTCTAAGTCTCAAGAGTTTTCCAAAAATATTGGGAGAGATCATAAATATACCAGGACTTCTCTTGTATGAAACTCCCATAAAAGCATTTCCATTTCGGAATCTTACTCCGCCTCCAACATCATATCCATGTAAATGTGGAATTGCACAATTTCCAAATAGAGTTGTTGCGATGTCAATGCTTGCCGAATTTACCATCATGGGTGAAGGGAAAGTGATCCCAATGCAATCTTCACATGTAGAATATATTTGTATCAGGAGCTGTGAACTTTCAGATGAATATCTATCAACAAGTCTCATGTTGTTTGCAAATGTGAAAGAATTACACCTAACTAACAATCATTTCACAGTTCTTCCTAAATCAATCGAAAAATGTCATTTTTTATGGAGACTTGTCTTGGATGATTGTGAGGAACTTCAGGAAATTAAAGGGATTCCTCCATGCTTAAGAATGTTATCCGCACTAAACTGTCAATCCTTGACTTCGTCAAGCAAAAGCAAATTACTAAATCAGGATTTACATGAGGATGGAAATACTTGGTTCCGTTTGCCACGAGCAAAGATTCCAGAGTGGTTCGACCACCAATGCTCGGAAGGATTGTCAATTTCTTTCTGGTTTCGTAACAAGTTTCCTGACATACTTCTCTGTGTTGGTTCTCCGTTGACATGGTTCCCTAATCATCAACATCGTGTTAGGGTGATCATCAATGGCAATACATTTTTCTATACCCATGGTTTAAATATAGGCAGAAGAGAGCATTAG 3807 0.3817 MASLTDRFKYDVFLSFRGEDTRHGFTGNLWKALQDRGVNTFIDDEKLRKGEEITLSLVKAIEDSNMAIVVLSKNYASSSFCLQELSTILDCIKDKGRCVLPVFYLVDPSDVRKLKSCYGEAMMGHEMGSNSNIDLLKKWKNALHQVSNLSGFHFKNKDRDEYEHVFIQKIVEQVSREIIPVTLHVPDYLVGLKDQKLIVTSLLSVGSVDTVHMVGIHGTGGIGKTTLALEVYNSIVHRFQGSCFLEKVRENSDKNGLIYLQKILLSEIVGEKSIELPSVRQGISILQQRLHQKKVLLLLDDVDSEEQLQAIAGRSDWFGPGSRVIITTRDKRLLTCHGVESTYEVKGLNDKDAFELVRWKAFKNKFSPSYNDFLLVQKHTGKLTANKLLRLKTLNTENKFSGYVHVLERAVAYASGLPLALEVIGSHFFNKTIEQCKCALDRYERVPDKKIQTTLQLSFDALQEEEKSVFLDIACCFKLYKLTRVEQILHAHHGDIMKDHINVLVEKSLIKINEFGDVTLHDLVEDMGKEIVRQESPEDPGKRSRLWASKDIIQVLEENTGTSKIEIICPNSRIEVEWDGEAFKKMENLRTLIIIDGKFTESPKHLPNSLRVFAHFQNPSWDLPSEFYPKKLAICNIPSDSTSFEWGDFFKKKFKNIRVLNFDGNKFLTRTPDVSGLVHLEEFSFQDCENLITVDDSVGLLGKLKTLRAMCCIKLRRIPPLKLASLEELDLSGCSCLESFPPVVDGLLGKLKTMSLRSCIKLRSIPPLKLTSLEIFDLSHCFSLETFPLVVDSFLGKLKTLLVQSCHSLRSIPPLKLDSLETLDLSHCYSLESFPPVVDGLVDKLKTMSVRNCIKIKIIPPLVLASLEELDLSNCTSLESFSPVVDGLMDKLKIMNFRSCINLRSIPPLKLDSLEKLDLSNCYSLESFPPVVDGFLGKLKTLLVTSCHNLRSIPPLKLDSLEELDLSCCYSLESFPSVMDGLLDKLKFLNIEHCIMLRSIPPLRLTSLEKFNLSYCLSLKSFPKILGEIINIPGLLLYETPIKAFPFRNLTPPPTSYPCKCGIAQFPNRVVAMSMLAEFTIMGEGKVIPMQSSHVEYICIRSCELSDEYLSTSLMLFANVKELHLTNNHFTVLPKSIEKCHFLWRLVLDDCEELQEIKGIPPCLRMLSALNCQSLTSSSKSKLLNQDLHEDGNTWFRLPRAKIPEWFDHQCSEGLSISFWFRNKFPDILLCVGSPLTWFPNHQHRVRVIINGNTFFYTHGLNIGRREH* 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5123 1268 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 889 1227 IPR044974 GO:0006952
Tpr2g5123 1268 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 872 IPR044974 GO:0006952
Tpr2g5123 1268 Pfam NB-ARC domain 212 444 IPR002182 GO:0043531
Tpr2g5123 1268 PRINTS Disease resistance protein signature 213 228 - -
Tpr2g5123 1268 PRINTS Disease resistance protein signature 289 303 - -
Tpr2g5123 1268 PRINTS Disease resistance protein signature 414 428 - -
Tpr2g5123 1268 PRINTS Disease resistance protein signature 815 831 - -
Tpr2g5123 1268 Gene3D - 383 463 IPR042197 -
Tpr2g5123 1268 Pfam TIR domain 9 176 IPR000157 GO:0007165
Tpr2g5123 1268 SUPERFAMILY "Winged helix" DNA-binding domain 449 557 IPR036390 -
Tpr2g5123 1268 Gene3D - 4 182 IPR035897 -
Tpr2g5123 1268 ProSiteProfiles TIR domain profile. 8 178 IPR000157 GO:0007165
Tpr2g5123 1268 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 152 IPR035897 -
Tpr2g5123 1268 SMART till_3 9 149 IPR000157 GO:0007165
Tpr2g5123 1268 Gene3D Ribonuclease Inhibitor 795 934 IPR032675 -
Tpr2g5123 1268 Gene3D Ribonuclease Inhibitor 935 1032 IPR032675 -
Tpr2g5123 1268 Gene3D Ribonuclease Inhibitor 1060 1190 IPR032675 -
Tpr2g5123 1268 Gene3D Ribonuclease Inhibitor 570 794 IPR032675 -
Tpr2g5123 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 386 473 IPR027417 -
Tpr2g5123 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 373 IPR027417 -
Tpr2g5123 1268 SUPERFAMILY L domain-like 575 899 - -
Tpr2g5123 1268 SUPERFAMILY L domain-like 881 1188 - -
Tpr2g5123 1268 PANTHER ARCHAEAL ATPASE 889 1227 - -
Tpr2g5123 1268 PANTHER ARCHAEAL ATPASE 20 872 - -
Tpr2g5123 1268 Gene3D - 183 343 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5123 Tpr-Chr2 57188598 57206175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5123 748 929 WRKY Transcription Factor Family AT4G12020 32.258 5.59e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5123 - - mtr:MTR_6g079140 1543.1