Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5085 ATGGCTTCCCTCATCGATCGATTCAAATACGATGTTTTCCTCAGCTTCCGAGGCGAAGATACCCGCCACGATTTCACCGGAAATCTCTGGAAAGCACTTCAAGACAGAGGAATCAACACTTTCATTGACGACGAGGAGCTTCGCAAAGGGGAAGAAATCACACCATCACTCATCAAAGCTATTGAAGACTCCAACATGGGCATCATTGTACTTTCCAAGAACTATGCATCTTCTTCCTTTTGCTTACAAGAACTTTTCACTATCCTCGCTTGTATCAAAGATAAAGGTCGCTGTGTCTGGCCGGTTTTTTATGAAGTGGATCCTTCTGATGTAAGAAAACTGAAAAGGAGTTATGGAGAAGCGATGGTTGAGCATGAAAAGGGGTCCAGTAGCAACATAGTTCTGTTGCAGAAATGGAAGAATGCTTTACATCAAGTTGCTAATTTGTCTGGCTTTCATTTCAAAAAGGGGGATGATTATGAACATGTTTTTATTGGGAAGATAGTTGAACGAGTCTCAAGGGAGATTATGCCTGTTACTTTACCTGTTCCTGATTATATAGTTGGATTCAAGTACCAAAAGCAAATTGTAACATCACTTTTGAATGTTGGGTCTGATGATAGATTCCACATGGTAGGGATCCATGGCATTGGTGGAATAGGGAAAACCACTCTTGCCCTAGAAGTTTATAATTTGATTGTCCGTCAATTTGAAGGTTCCTGTTTTCTTGAAAAAGTCAGAGAAAATTCAGATAAAAATGGACTGATATATCTCCAAAAGATCCTTCTGTCTGAAATTGTTGGAGATAAGAAAATTAAGATAACAAGTGTTAGACAAGGAATTTCCATATTACAGCAAAGGCTCCACCAAAAGAAGGTTCTTTTACTTCTAGACGATGTTGACAATGAGGAGCAATTACAGGCTATTGCTGGAAGATCTGATTGGTTTGGTCCAGGCAGTAGAGTCATCATCACGACTCGGGACAAAAGGTTGCTAACATGTCATGGGGTTGAATGTACATATGAGGTGAAGGGGTTGAATGACAAAGATGCTTTTGAGTTGGTTAGATGGAAAGCTTTTAAAAATGAATTTAGTCCAAGCTATAACGATTTTTTATTAGTACAAAAGCATACCAGAAAATTGACTGCGAACAAATTGCTTAGATCGAAAACTTTAAAGACTGAAAAAGTTATTTCAGGTTATGTGCATATTTTAGAACGTGCTGTAACCTATGCTTCTGGCCTTCCACTCGCTTTGGAAGTCATCGGTTGTCACTTTTTTAATAAGACAATAGAGCAATGTAAATGTGCACTAGATCGTTATGAAAAGATTCCTGATAAAAAGATCCAAAGGATACTACAACTGAGCTTTGATGCTTTGCAGGAAGAAGAGAAGTTTGTTTTTCTTGACATTGCCTGTTGCTTCAAAGGATATAAATTGACAAGGGTCGAACAAATACTTCATGCTCATCATGGTGATGCCATGAGAGATCACATTAGTGTGTTAGTGGAAAAATCTCTCATAAAAATAAGTGAGTCTGATATTGTGACATTGCATGATTTGATAGAGGAAATGGGGAAAGAAATTGTTAGACGAGAATCACCGGACCCTGGAAAACGCAGTAGGTTATGGGCCTCTGAAGATATAATTCAAGTTTTAGAAGAAAATACGGGAACAAGTAAAATTGAAATTATATATCCAAACTCCCGGATTGAAGTAGAATGGGATGGAGAGGCTTTCAAGAAGATGGAAAACCTCAGAACTCTAATTATTAAGGATGGCAAATTTACTGAAAGTCCCAAACATCTTCCGAATAGTCTAAGAATACTCCAACTCCAACATAGTCTATGTCTGTCATGGGATTTACCATCTGAGTTTTATCCAAGGAAACTTACCATATGCAATATTTCCACTAAGTCTACATTATTCACGCAGAAGTTCAAGAATATAATGGTTTTAAATTTTGATCGCCATGAATTTTTAACCCGGATACCAAATGTATCTGGTCTCGTAAATTTAGAAGAATTTTCATTTCAAGATTGTGTGAATTTAATCACAGTCGATGACTCCGTTGGGTTGCTGGGTAAACTTAAAACCTTGAGAGCTATGTGTTGCATCAATCTTAGGAGGATTCCGCCTCTCAAGTTGGCTTCTCTAGAAGAACTCGATCTTTCAATGTGTTCTTGTCTTGAGAGTTTTCCACCTGTGGTATGGTTGCTGGGTAAACTTAAAACCATGAGCCTTAGAAGGTGCATCAAGCTAAGGAGTATTCCACCTCTTAAGTTGACTTCGCTAGAAAAACTCGATCTTTCACATTGTGTTAGTCTAGAGAATTTTCCACTTGTGGTGGATAGTTTTCTTGGAAAAGTTAAGACCCTGCTTGTTCAAAGTTGTCACAATCTCATGAGTATTCCACCTCTCAAGTTGGATTCACTAGAAAAACTAGACCTTTCTTATTGTTTTAATCTCAAGAGTTTTCCAATTGTGGTAGATGGTTTGTTGGATAAACTTAAATTCTTGAGCATTGAACGTTGCATCATGCTTAGGAGTATCCCACCGCTCAGGTTGACTTCTTTGGAACAGTTCAATCTTTCATATTGTCTAAGTCTAGAGAGTTTTCCAGAAATATTAGGAGAAATGAGAAATATAACACAACTTCACTTGGATGGTACTCCCATAAAAGAATTGCCATTTCCATTTCAAAATCGTACTCAACCTCAAACATTATATCCATGTACCTGTGGAATTGTTTACTTACCAAGTAGAGTTTATGCAATGTCAAAACTGGTTGAACTTACCATCCAGAGAGAAGAAAAACTGTGCCCAATGCAATCTTCACATGTAGAATGTCTCTGTCTCACAAATTGCATACTTTCAGATGAGTTTCTCTCAACAGGTCTCATGTTATTTGCTAATGTGAAAGAATTACACCTAACTAAAAATCAATTCACAGTTGTTCCTAAATCTATTGAAAAATGTCATTTTTTATGGAGGCTTGTCTTGGATAACTGTGAGGAACTTCAGGAAATTAAAGGGATTCCTCCATGCTTAAAAACATTATCTGCTTTGAACTGCAAATCGTTGACTACTTCGTGTAAAATTAAATTACTAAATCAGGAATTACATGAGGCTGGAAACACTTGGTTCTGTTTTCCACGAGCGAAGATTCCAGAGTGGTTTGACCACCATTGCTTGGCAGGATTGTCAATTTCTTTCTGGTTTCGAAACAAGTTTCCTGCCATAGCTCTTTGTGTTATTTCTCCATCGACGTTGGATGATTCTCGGCGTCTTGTAAGAGTGATCATCAATGGCAATACATTTTTCTATGAAAGTGATGATAAAAGACATAAGTCACCGGCAAAAATGTATCATTTACATCTTTTTCATATGAAAATGGAAAACTTCAATGATAACATCGACAAAGCTTTTTTTGAAAATAAGTGGAACCATGCAGAGGTTGACTTTGGATTCCCATTCATGAATAGCGGAATCCATGTATTGAAAGAGAAAAGTAGCATGAACGATGTTAGATTCACCAAACCAGAGAATGATGCCTGA 3558 0.3744 MASLIDRFKYDVFLSFRGEDTRHDFTGNLWKALQDRGINTFIDDEELRKGEEITPSLIKAIEDSNMGIIVLSKNYASSSFCLQELFTILACIKDKGRCVWPVFYEVDPSDVRKLKRSYGEAMVEHEKGSSSNIVLLQKWKNALHQVANLSGFHFKKGDDYEHVFIGKIVERVSREIMPVTLPVPDYIVGFKYQKQIVTSLLNVGSDDRFHMVGIHGIGGIGKTTLALEVYNLIVRQFEGSCFLEKVRENSDKNGLIYLQKILLSEIVGDKKIKITSVRQGISILQQRLHQKKVLLLLDDVDNEEQLQAIAGRSDWFGPGSRVIITTRDKRLLTCHGVECTYEVKGLNDKDAFELVRWKAFKNEFSPSYNDFLLVQKHTRKLTANKLLRSKTLKTEKVISGYVHILERAVTYASGLPLALEVIGCHFFNKTIEQCKCALDRYEKIPDKKIQRILQLSFDALQEEEKFVFLDIACCFKGYKLTRVEQILHAHHGDAMRDHISVLVEKSLIKISESDIVTLHDLIEEMGKEIVRRESPDPGKRSRLWASEDIIQVLEENTGTSKIEIIYPNSRIEVEWDGEAFKKMENLRTLIIKDGKFTESPKHLPNSLRILQLQHSLCLSWDLPSEFYPRKLTICNISTKSTLFTQKFKNIMVLNFDRHEFLTRIPNVSGLVNLEEFSFQDCVNLITVDDSVGLLGKLKTLRAMCCINLRRIPPLKLASLEELDLSMCSCLESFPPVVWLLGKLKTMSLRRCIKLRSIPPLKLTSLEKLDLSHCVSLENFPLVVDSFLGKVKTLLVQSCHNLMSIPPLKLDSLEKLDLSYCFNLKSFPIVVDGLLDKLKFLSIERCIMLRSIPPLRLTSLEQFNLSYCLSLESFPEILGEMRNITQLHLDGTPIKELPFPFQNRTQPQTLYPCTCGIVYLPSRVYAMSKLVELTIQREEKLCPMQSSHVECLCLTNCILSDEFLSTGLMLFANVKELHLTKNQFTVVPKSIEKCHFLWRLVLDNCEELQEIKGIPPCLKTLSALNCKSLTTSCKIKLLNQELHEAGNTWFCFPRAKIPEWFDHHCLAGLSISFWFRNKFPAIALCVISPSTLDDSRRLVRVIINGNTFFYESDDKRHKSPAKMYHLHLFHMKMENFNDNIDKAFFENKWNHAEVDFGFPFMNSGIHVLKEKSSMNDVRFTKPENDA* 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5085 1185 Gene3D Ribonuclease Inhibitor 786 941 IPR032675 -
Tpr2g5085 1185 PRINTS Disease resistance protein signature 211 226 - -
Tpr2g5085 1185 PRINTS Disease resistance protein signature 287 301 - -
Tpr2g5085 1185 PRINTS Disease resistance protein signature 412 426 - -
Tpr2g5085 1185 PRINTS Disease resistance protein signature 760 776 - -
Tpr2g5085 1185 Gene3D - 175 339 IPR027417 -
Tpr2g5085 1185 Gene3D Ribonuclease Inhibitor 942 1045 IPR032675 -
Tpr2g5085 1185 Pfam TIR domain 9 175 IPR000157 GO:0007165
Tpr2g5085 1185 Gene3D - 381 461 IPR042197 -
Tpr2g5085 1185 Pfam NB-ARC domain 196 442 IPR002182 GO:0043531
Tpr2g5085 1185 Gene3D - 5 174 IPR035897 -
Tpr2g5085 1185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 471 IPR027417 -
Tpr2g5085 1185 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 152 IPR035897 -
Tpr2g5085 1185 ProSiteProfiles TIR domain profile. 8 176 IPR000157 GO:0007165
Tpr2g5085 1185 PANTHER ARCHAEAL ATPASE 742 1156 - -
Tpr2g5085 1185 PANTHER ARCHAEAL ATPASE 20 768 - -
Tpr2g5085 1185 Gene3D Ribonuclease Inhibitor 564 785 IPR032675 -
Tpr2g5085 1185 SUPERFAMILY L domain-like 788 1052 - -
Tpr2g5085 1185 SUPERFAMILY L domain-like 574 851 - -
Tpr2g5085 1185 SUPERFAMILY "Winged helix" DNA-binding domain 447 554 IPR036390 -
Tpr2g5085 1185 SMART till_3 9 149 IPR000157 GO:0007165
Tpr2g5085 1185 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 742 1156 IPR044974 GO:0006952
Tpr2g5085 1185 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 768 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5085 Tpr-Chr2 56758117 56763745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5085 10 897 WRKY Transcription Factor Family AT4G12020 28.289 1.46e-64 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5085 - - cam:101511404 1581.23