Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5080 ATGCAGACAACAAACTCATCAGGATTACCAAATTGTGAAGCAAACATGGATAATGGTAGAGATGCTGATGATGTTGAAATGAACAGTGGTAATGATATGCATGACGAGGAAGGAGAAGATGATTTGGATGGTTACACACCTATAGATAAATTCACAGATGATGATATAAGAGAGATGGAATTTGAATCAGAGCAAAACGTTGTTGATTTTTATGAAATGTATGCTGAATATCATGGGTTTGCTGTAAGAAAAGATTTTAAGGAATCTGATATGGAAGGGAATATTGTTAAGCGCCAATTAGTTTGTAATAGACGAGGTCAGAGACATAAAAGCCATTTGTTGCGGGTGAACCGGCGCAGGGAGCCAAGGCCAATAACTCGAACAGATTGTCGTGCTCGGATTCATGTGGCGTATAATGTTGAGACTAAGCGTTGGAGAGTTGTTACATTTGAGTCCGTTCATAATCATGAGTTAATTCCACGACGTTTCGTTCATTGTATTCCTAAGTATCGTCGATTGAGTGAAGCTGATAAAGCGCTCGCTGATGGCTTGCATACATGTGGAGTTAGAACATGTCATATTTTGGGTTTTATGATGGCTCAGAAAGGTGGTCACGAAGGTTTGGGATTCATCAAGAAAGACCTCTATAACTACTTTAGTAATGGAGCTAAGGCTAGAAGGGAAAATGGGGATGCTATTGCTGCTTTGTGTTATTTCCAGTCTAAAGCTGATAATGAACCGATGTTTTATTCGAAGTTTACAATAGACAATGGTCGTCTACAAAATTTATTTTGGTCAGATGGAACTAGCCGATTTGACTTTGAATGTTTTGGTGACGTGCTTGCATTTGACACAACCTACAAAAGGAACAGGTACAACAAGCCGTTTGTTATTTTCAGTGGGTTGAATCATCATGGTGAAACTACAATTTTTGGGTGTGCTTTAATTTCTGATGAAACAACTGAGACATATAAATGGCTTTTAAATACCTTGTCAGATGCAATGTTTAAAAAACATCCCAGAGTAGTTGTTACTGATGGCGATGGTGCAATGAGGGAAGCTATTAGAGTTGAATTTCCAAATGCATTTCATCGCCTTTGTTCTTGGCATTTACATCAAAACGCTATTCAAAATGTCAAGAGTCCAAAGTTTGTGGAAGAGTTTAACTCATTGATGTATGCTGATTATTTCCCTGAGAAATTTGAAACTGAGTGGAAGAGGATCACCGATGATTGTGATGTATCAAACCACAAGTGGGTTAAAAAAGTTTACGAGACGAAGACAATGTGGGCAAGTGCGTACATGCGAGACAAATTTGTTTGTGGTATAAGGACTACATCTCGTTGTGAAGGTATCAATTCATTTATCAAGGGGTATGTGGAAAAGAAAAACAGTCTTGTTGAATTCATTCATAATTTTGAAAGAGCAGTGAAAGAATACAGACATAATGAATTATTGTCTGATTTCAACTCGTTATATTATGAGCCTGTGTTGACAAATGCTTTAGAAGGGATTGAGATCGATGCTTCCAAGGTCTTTACAAGAAATAAGTTTAGGGAAGTTAAAAAACAGATAGAAGGGGCAGGTGCATTGAATGTCATTGAACGGACTGAGCTTGGTAATAATGTCACGTTGAAGATGAATCGATTTTGCAATCCAAATTTGAATATTTCAGTTCGTCTTGATAAGGTGGAAAATATATTTTCATGTGACTGTAGTTTGTTTGAACGCGAAGGAATTCCATGTTCTCACATTATTTGTGCCATGAGGCACGAGCATATTAATGTGTTTCCAAAAAGTTTAATTTGTAAGAGGTGGACTAAATCAGCAAAGAATGACTACATATCATCAACTACGTCTTTCGAAGAATGTGATTCTGAAAAGTTGTTCATGTTTCGTCGTGGGGCTATGTCTGCTGCTTTCAATACTTTGTGCGAAGTTTCTTGTAAACATGATGGTTCTTATAAAGAGGCTATAGAAGGACTTCACAATTTGCTTGAGAAAATAAGGAGGCATCAAGATGGAAATAATAAAAATAATGCCAATCCGTCGGTTATTGGTGATCCCGAAAACGTCAAGAGCAAGGGTGCCCCTCGTAGGAACAAAAAATCACGCGGCAATAGATATTGTACTCGTTGTAAACGACCTAATCACAACAAACAAACATGTCCGTTACGAGATGCACCTGGTGATCTACATCAAGTCGAGGGTGAGGGTTCAGCTGGCCAACCTAATGACGAGTCGATGGATTTCAATGCTGCTCATAACAACCGTGGTAGTAAACAAAAGAGAAAACGCGCCACTGTTGCTAATTCAAAACAAGCTGAAAAAGAGAAGTCCAACAAACCTAAGGAGAACATGTCAGATACAAATGAACAAGACATTCCAGGGGCTAGTGCTTTTGTCAATCCAAATCACTCATTCAATATTGACAGCAATGTTATGAGACATGGTTTTGTATTTGGTAATCCCACTAGTAAAATGGAACGTCAGAAAGCAACGTGGAACTATGGTGTAGGGTATGGTGCCGATTATTTCACCACATGTAATGGGGTTCGAAATCAAAGTGCATCAATTTTTCCCCAATTTGTTCCAAATCAAAGTGCACCAATTTTCCCCCAATTTCATCCAAATCAAAGTTCACCAATTTTCCCCCAATTTCATCCAAATCAAAGTTCACCAATTTTCCCCCAGTTTCCACCAGTAGACAACAATTTTCTTCGACAAAGCAGAACACATGATTTCCCTCGTTATACACGTTTTATGGAGGAGGTGGAGAACTCGGCTAAAAAGGCAGGCTAG 2802 0.3847 MQTTNSSGLPNCEANMDNGRDADDVEMNSGNDMHDEEGEDDLDGYTPIDKFTDDDIREMEFESEQNVVDFYEMYAEYHGFAVRKDFKESDMEGNIVKRQLVCNRRGQRHKSHLLRVNRRREPRPITRTDCRARIHVAYNVETKRWRVVTFESVHNHELIPRRFVHCIPKYRRLSEADKALADGLHTCGVRTCHILGFMMAQKGGHEGLGFIKKDLYNYFSNGAKARRENGDAIAALCYFQSKADNEPMFYSKFTIDNGRLQNLFWSDGTSRFDFECFGDVLAFDTTYKRNRYNKPFVIFSGLNHHGETTIFGCALISDETTETYKWLLNTLSDAMFKKHPRVVVTDGDGAMREAIRVEFPNAFHRLCSWHLHQNAIQNVKSPKFVEEFNSLMYADYFPEKFETEWKRITDDCDVSNHKWVKKVYETKTMWASAYMRDKFVCGIRTTSRCEGINSFIKGYVEKKNSLVEFIHNFERAVKEYRHNELLSDFNSLYYEPVLTNALEGIEIDASKVFTRNKFREVKKQIEGAGALNVIERTELGNNVTLKMNRFCNPNLNISVRLDKVENIFSCDCSLFEREGIPCSHIICAMRHEHINVFPKSLICKRWTKSAKNDYISSTTSFEECDSEKLFMFRRGAMSAAFNTLCEVSCKHDGSYKEAIEGLHNLLEKIRRHQDGNNKNNANPSVIGDPENVKSKGAPRRNKKSRGNRYCTRCKRPNHNKQTCPLRDAPGDLHQVEGEGSAGQPNDESMDFNAAHNNRGSKQKRKRATVANSKQAEKEKSNKPKENMSDTNEQDIPGASAFVNPNHSFNIDSNVMRHGFVFGNPTSKMERQKATWNYGVGYGADYFTTCNGVRNQSASIFPQFVPNQSAPIFPQFHPNQSSPIFPQFHPNQSSPIFPQFPPVDNNFLRQSRTHDFPRYTRFMEEVENSAKKAG* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5080 933 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 682 IPR031052 GO:0006355
Tpr2g5080 933 SMART 26again6 568 595 IPR006564 GO:0008270
Tpr2g5080 933 MobiDBLite consensus disorder prediction 755 790 - -
Tpr2g5080 933 MobiDBLite consensus disorder prediction 769 789 - -
Tpr2g5080 933 ProSiteProfiles Zinc finger SWIM-type profile. 555 593 IPR007527 GO:0008270
Tpr2g5080 933 MobiDBLite consensus disorder prediction 17 32 - -
Tpr2g5080 933 MobiDBLite consensus disorder prediction 1 38 - -
Tpr2g5080 933 MobiDBLite consensus disorder prediction 673 713 - -
Tpr2g5080 933 MobiDBLite consensus disorder prediction 698 713 - -
Tpr2g5080 933 Pfam MULE transposase domain 280 374 IPR018289 -
Tpr2g5080 933 PANTHER OS02G0262500 PROTEIN 55 682 - -
Tpr2g5080 933 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5080 Tpr-Chr2 56689949 56695619 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g5080 MULE 1.2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5080 - - ccaj:109792835 723.776