Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5073 ATGTCTTCTGAAATTCTATCTAACATCATGAGTTTGATCATTGACATAACATTTTTCTATATTATTTTGTTCTTTCTTTCATTGAACATAGTCTTGTGTATTGAAATTGAAATCAATGATTTTCATCCACAAGAAAGAGATGGTTTGTTAGTCCTAAGAGATTCTTTAAATTCTTCTATAAATTTGCATGGAAATTGGACAGGACCACCTTGTATAAACAACCTTAGTAGATGGTTTGGTATCACTTGTTCAAATTGGCATGTTGTTCATATTACAATTCAAGGTGTTAATCTTAGTGGCTATTTACCTTCATCATTTCTTCAAAACATAACTTTCTTGAGACAAATTGATTTTAGAAATAATGAACTTTTTGGAACATTGCCAAATTTAACAGGTTTGGTTTTCTTGGAAGAAGTGAAGTTTTCAGTTAATCACTTTTCAGGTGAAATTCCTTTGGAATATGTTGAATTGCATAGTCTTAAAGTTTTGGAGTTACAAGAGAATTACTTAGATGGTGAAATTCCACCTTTTGATCAACCTTCATTGATAAGTTTCAATGTGTCATATAATCATTTGGTAGGGAAAATTCCTGAAACTTCTTTGCTTCAAAGGTTTCCAAAGAGTTCTTTTGATGATAATTCTGATCTTTGTGGATTTCCATTGGATAAGTCATGTTCTGTTGAACCTCCTGCACCACCTCCTTTTGCTATTCCACCTAGTCCTTCAATGGAGGAAAATAAGAAGAGGCTTCAAGTTTGGATTATTGCTTTGATTGTTATTGTTGCGGCTGTTTTGTTTCTTTTTCTGGTGATTATTGCTTTCTTGTTTTGTAAAAGACAAGCTAAAGGAAATGAAAGAAGAAGAAATGATTCAACAAGGTATGTTTTTGGAGCATGGGCAAAGAAAATGGTCTATAATGCAGGAAACAGTGAAGATTCTGAAAAATTAGGCCAATTAGAATTTTGCAACAAGAAATTTCAAGTTTTTGATATGGATGATTTATTAAGAGCATCAGCAGAAGTTCTAGGAAGAGGAGATTTTGGTGTTACATATAAAGCAACACTTGAAACAGGTAATATTGTTGCAGTAAAAAGACTTAGCTACATCAATGAATTGAACAAGAGAGAGTTTATTCAGCAAATGCAATTGCTAGGAGAAATAAAGCATGAAAATCTTGTTGAAATTATCTCCTTTTATCATTCAGAAGATCAAAAGCTTGTCATATATGAACTTGTCTCTGATGGCACTTTGTTTGAACTCCTACATGAGGGTAGAGGAATTGGAAGAATACCTCTTGATTGGAGTACAAGACTTGCAATTATCAAAGACATAGCAAAAGGTCTTGATTTCCTTCATCAATATTTGTCTTCTCACAAAGTTCCTCATGCAAACCTCAAATCAACAAATATTCTAATCCATCAAGATAATCAAGGTTACCATTCAAAGCTCATAGACTATGGTTTCTTACCATTACTCTCATCATCAAAAAAATATGAAGAAAAGCTAGCAATAAGCAAGTCACCAGAATTTGTTAAAGGGAAAAAGTTGACACACAAAACTGATGTATATTGTTTTGGTATCATAATGTTAGAGATTATAACAGGCAAAATTCCTGGTCATATCCTAGGTGATGAAGTTGAAGAAATAACAACTAATGATCTTTCAGATTGGGTTAGAACTGTTGTGAATAATGATTGGTCTACTGATATATTGGATTTGGAAATATTAGCAGATAGAGAAGGACATGATGCAATGTTGAATCTAACTGAGATAGCTCTTGAGTGTACTGATATGATACCTGAGAATAGGCCTAAAATGAGTGTGGTGTTGAGGAAAATTGAAGAGATGGAGCAAATCATAAAAGAGAATGAATGA 1875 0.3269 MSSEILSNIMSLIIDITFFYIILFFLSLNIVLCIEIEINDFHPQERDGLLVLRDSLNSSINLHGNWTGPPCINNLSRWFGITCSNWHVVHITIQGVNLSGYLPSSFLQNITFLRQIDFRNNELFGTLPNLTGLVFLEEVKFSVNHFSGEIPLEYVELHSLKVLELQENYLDGEIPPFDQPSLISFNVSYNHLVGKIPETSLLQRFPKSSFDDNSDLCGFPLDKSCSVEPPAPPPFAIPPSPSMEENKKRLQVWIIALIVIVAAVLFLFLVIIAFLFCKRQAKGNERRRNDSTRYVFGAWAKKMVYNAGNSEDSEKLGQLEFCNKKFQVFDMDDLLRASAEVLGRGDFGVTYKATLETGNIVAVKRLSYINELNKREFIQQMQLLGEIKHENLVEIISFYHSEDQKLVIYELVSDGTLFELLHEGRGIGRIPLDWSTRLAIIKDIAKGLDFLHQYLSSHKVPHANLKSTNILIHQDNQGYHSKLIDYGFLPLLSSSKKYEEKLAISKSPEFVKGKKLTHKTDVYCFGIIMLEIITGKIPGHILGDEVEEITTNDLSDWVRTVVNNDWSTDILDLEILADREGHDAMLNLTEIALECTDMIPENRPKMSVVLRKIEEMEQIIKENE* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5073 624 ProSiteProfiles Protein kinase domain profile. 336 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5073 624 Gene3D Transferase(Phosphotransferase) domain 1 412 624 - -
Tpr2g5073 624 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 618 - -
Tpr2g5073 624 Pfam Protein kinase domain 339 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5073 624 Pfam Leucine rich repeat N-terminal domain 43 84 IPR013210 -
Tpr2g5073 624 Gene3D Ribonuclease Inhibitor 42 227 IPR032675 -
Tpr2g5073 624 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 21 618 - -
Tpr2g5073 624 SUPERFAMILY Protein kinase-like (PK-like) 340 617 IPR011009 -
Tpr2g5073 624 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Tpr2g5073 624 Gene3D Phosphorylase Kinase; domain 1 302 411 - -
Tpr2g5073 624 SUPERFAMILY L domain-like 42 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5073 Tpr-Chr2 56639042 56642720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5073 45 617 Receptor kinase-like Gene Family AT1G48480 35.828 9.03e-106 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr2g5073 Pkinase 5.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5073 - - gmx:102668068 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5073 2 56639042 56642720 Tpr2g5073 2 56639042 56642720 ECH