Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5068 ATGACAACATCATCATCATACATGAAACATCATACATTTCACTTTGTTCTGACTTTATTGTTCATCTTATTAAACCATACAAATTCTCAATCTCATTCTAATCAATATAATCAAGAACATAAAGTCCTATTAAATATTAAACAATACTTTCAAAACCCTTCTTTCCTTAACCATTGGACATCAAATTCCAATCATTGTTTTTGGAATGAAATCATTTGCACAAATGATGATTTTGTTACTGGAATCACTCTTTCACATATGAACATCACAAAAACAATACCACCCTTTATTTGTAATGAACTCAAAAACCTAACACATGTTGATTTCAGTTCCAATTTTATCCCTGGTGATTTTCCAACACTTTTTTATAATTGTTCAAAGCTTGTTTCTTTAGACCTTTCTTTGAACAATTTTGATGGTAAAATTCCTAATGATATTGGAAATTTGAGTCCTAGTTTGCAATATCTTAACCTTAGTTCAACAAATTTTCATGGTGGTGTTCCTGATGGGATTGGAAAGTTGAAGGAATTGAAAGAATTTAGAATTCAATTTTGTTTATTGAATGATACTGTTTCTGATGAGATTGGTGAATTGTTGAATCTTGAGTATTTGGATTTGTCTTATAATACTATGTTTCCTTCATGGAAATTGCCATTGAGTTTGACCAAGTTGGAAAAATTGAAGGTTTTTAATGTTTATAGCTGTAACTTGTTTGGTGAAATGCCTGAAAGAATTGGAGATATGGTTTCTTTGGTGAGATTGGATATGTCAGATAATGGTTTAACTGGTGAAATTCCTAGTGGTTTGTTCTTGTTGAAGAATTTGAGTATACTTTTTCTTAACAGGAATAATCTCTCTGGAGAGATACCTAGTTTAGTTGAATCATTGAATTTGACTAAACTTGATCTTGCAATCAACAATCTTGTAGGGAAAATACCAGAAGATTTAGGAAAGCTTCAAAACTTAACATGGTTGAGTTTGTCTATGAATAGTTTATCAGGTGTCATACCAGAAAGTTTAGGTCTTGTTCCGTCTCTTACTGATTTTCGTGTGTTTTCGAACAATTTATCAGGTACAATTCCTCCTAAACTCGGTCGCAGTTCAAAGCTCAAAACCTTTCATGTTTCATCTAACAGTCTTGTTGGAAAGTTACCTGAGAATTTATGCTATTATGGCGAGTTACTTAACCTGACAGCTTATGAAAATAGTCTTAGTGGAGAGTTACCAAAATCACTAGGAAATTGTAGTAGCTTGTTGGAATTGAAAATTTACAAAAATGAATTCTCTGGTATTATTCCTAGTGGTCTTTGGACATCATTCAATTTATCATACTTCATGGTAAATACTAATAAATTCAATGGTGTGATTCCAGAAAATTTGTCTTCGAACATTTCATGGTTCGCGATAAGTAACAATCAATTTTCTGGTAGAATTCCATCTGGAGTATCTTCATGGACTAATGTGGTAGTCTTTGATGCAAGTAACAACTTCTTAAATGGAAGTATTCCACAAGAGTTAACATCTCTTCCAAAATTAACAACTCTTTTGCTTGATCAAAATCAGCTCAATGGTCCACTTCCATCAGATATAGTATCATGGAAGTCCTTAGTAACTCTTGATTTGAGCCAAAACCAACTTTCTGGTCAAATTCCTGATGCAATTGGAAAATTACCTGTCCTAAGTCAACTTGATTTGTCTGAAAATGAATTTTCAGGCAAAGTTCCATCTCAACTTCCTAGGCTCACCAATCTCAATCTGTCATCTAATCATTTGACTGGAAGGATTCCAGGTGAATTTCAAAATTCAGTGTTTGCTACAAGTTTTTTGGCTAATTCTGGTCTTTGTGCTGATACACCAATACTAAACATCACTTTGTGCAATTCTGGTATTCAAAGTGAAAACAAAGGATCATCATGGTCAATTGGCTTGATTATAGGCCTTGTGGTAGTGGCAATTTTATTGGCTTTTCTGGCCAGTTTCTTGATTATCAAAGCTTTCAAGAAAAGAAAGCATGATTTGGATAATTCATGGAAGCTTATTTCCTTTCAGAGGCTCAGTTTCGATGAAACAAGCATTGTCTCATCAATGACAGAACAAAATATTATTGGAAGTGGTGGATATGGCACGGTATATCGAGTTGATGTCGATGGTTTAGGCTATGTTGCTGTGAAAAAGATATGGAATAACAAAAAGTTAGACGACAAACTCAGGAGTTCGTTTTGCGCTGAAGTTAAAATATTGAGCAATATTCGTCATAACAACATTGTGAGACTGTTGTGTTGTATCTCTAATGACGATTCTATGCTTCTTGTCTATGAGTATCTTGAAAAACATAGTCTAGATAAGTGGCTGCGCACGAAGAGTAAGTCATCGTCATCAACTTTCTCGGGTTTAGTACAGCCACATGTTGTTCTTGATTGGCCAAAGAGGTTGAAAATAGCTAATGGAGCTGCTCAAGGTTTGAGCTACATGCATCATGATTGCTCACCACCTATTATTCATAGAGATGTTAAAACAAGCAACATACTTTTGGATGCTCAATTCAATGCAAAAGTTGCTGATTTTGGACTTGCTAGGATTTTAGTCAAGCCAGATGAACTTAACACAATGTCATCTGTGATTGGCTCATTCGGCTACATTGCTCCAGAATATGTTCAAACAACTAGAGTCACTGAAAAGATTGACGTGTTTAGCTTTGGAGTTGTCCTACTGGAACTAACAACTGGTAAAGAAGCTAACTATGGAGATCAATACTCGTCTCTTTCGGAATGGGCATGGCGTCAAACTTTGTTAGGAATCAATGTAGAAGAATTGCTAGACAAAGATGTGATGGAAGCTAGTTACTTGGATGAAATGTGCACAGTTTTCAAACTTGGTGTCATGTGTACTGCAACATTGCCTTCCAGTAGGCCTTCCATGAAAGAAGTTGTGCAGATATTGCTTAGCTTAGCAGAACCATTAGCTTATAGAGAGAAGAAAGTTGGTCACAACTATGATGCTGATCCTCTTCTTAAGAATTCAAAAAGTGACACTAGGTTGGATGTTGATGATATGTGA 3057 0.3484 MTTSSSYMKHHTFHFVLTLLFILLNHTNSQSHSNQYNQEHKVLLNIKQYFQNPSFLNHWTSNSNHCFWNEIICTNDDFVTGITLSHMNITKTIPPFICNELKNLTHVDFSSNFIPGDFPTLFYNCSKLVSLDLSLNNFDGKIPNDIGNLSPSLQYLNLSSTNFHGGVPDGIGKLKELKEFRIQFCLLNDTVSDEIGELLNLEYLDLSYNTMFPSWKLPLSLTKLEKLKVFNVYSCNLFGEMPERIGDMVSLVRLDMSDNGLTGEIPSGLFLLKNLSILFLNRNNLSGEIPSLVESLNLTKLDLAINNLVGKIPEDLGKLQNLTWLSLSMNSLSGVIPESLGLVPSLTDFRVFSNNLSGTIPPKLGRSSKLKTFHVSSNSLVGKLPENLCYYGELLNLTAYENSLSGELPKSLGNCSSLLELKIYKNEFSGIIPSGLWTSFNLSYFMVNTNKFNGVIPENLSSNISWFAISNNQFSGRIPSGVSSWTNVVVFDASNNFLNGSIPQELTSLPKLTTLLLDQNQLNGPLPSDIVSWKSLVTLDLSQNQLSGQIPDAIGKLPVLSQLDLSENEFSGKVPSQLPRLTNLNLSSNHLTGRIPGEFQNSVFATSFLANSGLCADTPILNITLCNSGIQSENKGSSWSIGLIIGLVVVAILLAFLASFLIIKAFKKRKHDLDNSWKLISFQRLSFDETSIVSSMTEQNIIGSGGYGTVYRVDVDGLGYVAVKKIWNNKKLDDKLRSSFCAEVKILSNIRHNNIVRLLCCISNDDSMLLVYEYLEKHSLDKWLRTKSKSSSSTFSGLVQPHVVLDWPKRLKIANGAAQGLSYMHHDCSPPIIHRDVKTSNILLDAQFNAKVADFGLARILVKPDELNTMSSVIGSFGYIAPEYVQTTRVTEKIDVFSFGVVLLELTTGKEANYGDQYSSLSEWAWRQTLLGINVEELLDKDVMEASYLDEMCTVFKLGVMCTATLPSSRPSMKEVVQILLSLAEPLAYREKKVGHNYDADPLLKNSKSDTRLDVDDM* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5068 1018 ProSiteProfiles Protein kinase domain profile. 696 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5068 1018 Gene3D Phosphorylase Kinase; domain 1 678 774 - -
Tpr2g5068 1018 SMART serkin_6 696 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5068 1018 Gene3D Ribonuclease Inhibitor 347 625 IPR032675 -
Tpr2g5068 1018 Gene3D Transferase(Phosphotransferase) domain 1 775 1001 - -
Tpr2g5068 1018 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 14 1011 - -
Tpr2g5068 1018 Gene3D Ribonuclease Inhibitor 36 213 IPR032675 -
Tpr2g5068 1018 Gene3D Ribonuclease Inhibitor 214 346 IPR032675 -
Tpr2g5068 1018 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 14 1011 - -
Tpr2g5068 1018 Pfam Leucine rich repeat N-terminal domain 37 73 IPR013210 -
Tpr2g5068 1018 SMART LRR_typ_2 248 272 IPR003591 -
Tpr2g5068 1018 SMART LRR_typ_2 578 601 IPR003591 -
Tpr2g5068 1018 SMART LRR_typ_2 319 342 IPR003591 -
Tpr2g5068 1018 SMART LRR_typ_2 509 533 IPR003591 -
Tpr2g5068 1018 SMART LRR_typ_2 534 557 IPR003591 -
Tpr2g5068 1018 ProSitePatterns Protein kinases ATP-binding region signature. 702 725 IPR017441 GO:0005524
Tpr2g5068 1018 SUPERFAMILY L domain-like 46 381 - -
Tpr2g5068 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Tpr2g5068 1018 PRINTS Leucine-rich repeat signature 536 549 - -
Tpr2g5068 1018 PRINTS Leucine-rich repeat signature 578 591 - -
Tpr2g5068 1018 Pfam Leucine Rich Repeat 580 601 IPR001611 GO:0005515
Tpr2g5068 1018 SUPERFAMILY Protein kinase-like (PK-like) 689 980 IPR011009 -
Tpr2g5068 1018 Pfam Protein kinase domain 698 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g5068 1018 SUPERFAMILY RNI-like 296 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5068 Tpr-Chr2 56586992 56590850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5068 35 1017 Receptor kinase-like Gene Family AT5G25930 47.988 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr2g5068 Pkinase 5.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5068 - - gmx:100813894 1390.94