Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5044 ATGGATTCAAGACGCACCAAAGCACAAAACTCAGTTACGGAAGGCGAAATTAACGAAGTTGTCGAAGTTAGGCGACCTGTTGTGCTTGGCCTTTTTGCAACGGCCATTGTTCCATCTGGTCAACCAAGAAGTCCTCCTAATGTGCCGCAGCCGATAGAAATTGACACGTCGTCTCATTTTGCGACTGATAGGGAAGAGAACGACAGAGATGAGTTGATCAAATGGGCTCGAAGCGTGTCGCAAAGTTTAAGGTTCGCAATTATAGTTAGGCGATCCGATTCGGGCGAGAAGAGAAAGGCTCAATTGGTGTTAGAGTGTGAACGTAGTGGGAAGTATGTTCCAGCCAAGAAGAAGTTGAAATCCGATACCTCCGGAACAAGAAAATGCGAATGTCCTTTCCGACTCCGTGGGTATTACAACAAGGCAACAAAACTATGGCGTTTGACTGTTGTCAACGGTATGCATAACCACGAGTTGGACAAAGGGCTTGAAGGGCATCTCGTGGCGGGGCGTTTGAAACCGCAAGAGAAGGAATTTATGGACGAGATGACAAGGAATGCGGTCGCTCCAAAAAACATATTGTCCACATTAAAGGAGAGAGATCCGGAAAACAAGACCTATGCAAAGCAAGTGTACAACGCTCGTCATAGGTACAGAGTTAAAATGAGGGCGTCCATGACTGAGATGCAACACTTATGTAAGAAGCTTGATGATAACAAGTACTACTACAAGTATCGGACGGTTGTTGAAGATGGAGTAGAACATCTTCAAGATATATTCTTTGCACATCCGAGGTCCATAACTTTATTGAACTCTTTTCATACTGTGCTGATGATGGACTCCACATACAAAACCAGCAAGTACAAAATGCCGCTGTTTGAGATAGTCGGATTCACTTCGACCGAGAAAAAATTCAACGTTGCTTTTGCCTGGCTCAGTAACGAAAAGGAAGACAACTTTATATGGGCTCTGCAACAACTACGTTGTTTGTTAAGGCGTGAGACAAATTTGCCGAAGGTTATCTTGACGGATCGAGATTTAGCTTTGATGAATGCTATTCCGGCTGTGTTTCCAGAAGCGGCGGCGTTGGTTTGTCGGTTCCATGTTAAGAAGAATGTGAGGACCAAGGCAGCCGAGCTGGTCAAGGTGAGGGATGGGGAAAAGGTCAAGGCGGCGGACATGAGGGAAAGAGTCTGTTTGGCGTTCGAGGATGTGTTAGATTCGTCTACTGAGAATATTATCATGATCTTTAACCTTTTTTCGAAAACGACTTCACAAGAATATTACATCCTTCTTGCATCTTGTTATTGA 1311 0.4455 MDSRRTKAQNSVTEGEINEVVEVRRPVVLGLFATAIVPSGQPRSPPNVPQPIEIDTSSHFATDREENDRDELIKWARSVSQSLRFAIIVRRSDSGEKRKAQLVLECERSGKYVPAKKKLKSDTSGTRKCECPFRLRGYYNKATKLWRLTVVNGMHNHELDKGLEGHLVAGRLKPQEKEFMDEMTRNAVAPKNILSTLKERDPENKTYAKQVYNARHRYRVKMRASMTEMQHLCKKLDDNKYYYKYRTVVEDGVEHLQDIFFAHPRSITLLNSFHTVLMMDSTYKTSKYKMPLFEIVGFTSTEKKFNVAFAWLSNEKEDNFIWALQQLRCLLRRETNLPKVILTDRDLALMNAIPAVFPEAAALVCRFHVKKNVRTKAAELVKVRDGEKVKAADMRERVCLAFEDVLDSSTENIIMIFNLFSKTTSQEYYILLASCY* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5044 436 Pfam MULE transposase domain 276 372 IPR018289 -
Tpr2g5044 436 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 102 375 - -
Tpr2g5044 436 Pfam Transcription factor AFT 108 159 IPR014842 GO:0000981|GO:0036086
Tpr2g5044 436 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 102 375 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5044 Tpr-Chr2 56293995 56295812 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g5044 MULE 1.4e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5044 - - vun:114181823 315.079