Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5002 ATGGCTCTGATCCTTCACGCTACCAAGGAAAACAAAAATGCTTACAAGACTTTGATTGCTGCTGAATATGTCGGTGTCAAAGTTCAATTGGTTCCAGATTTTCAGATGGGTGTTTCCAACAAAACCCCTCAATTTCTCAAGATGAACCCTATTGGAAAGGTTCCTGTCTTGGAAACCCCCGATGGTCCGATCTTCGAGAGCAATGCCATTGCTCGCTACGTTGCTCGATTGGGTGAAAACAATTTGTTTGGATCATCTCCGATTGATCAGGCTCACGTTGAGCAGTGGATTGATTTTTCTTCTTTGGAGATTGATGCCAATCTTATGAAGGTGTTCCTGCCTAGACTTGGATTTGCCCCCTACCTTCCTCCAGCAGAGGAGGCTGCACTTTCTGCATTGAAGAGATCATTTGAGGCTTTGAACACTCACCTTGCCAGCAATACTTACCTGGTTGGGGAATCTGTTACCCTTGCTGACATCATTACAACAGCCAACTTGTATTTGGGTTTCGCTAAACTCTTGGTCAAGAGCTTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTCTGGACTTTAATCAACCAGCCAAATTTCCGAAAGATATTCGGCCAGGTTAAGCAGACTGAAGCTATGCCACCTATTCAATCTGCAAAGAAGCCTGCCCAGCCAAAGCCCAAAACTAAAGAAGAACCAAAGAAAGCGGCTAAAGCAGAGCCCGAAAAGCCCAAAGAAGAAGCTGAAGAGGAGGCACCCAAGCCCAAACCCAAGAATCCTCTTGATCTTCTTCCTCCAAGCAAGATGGTATTGGATGACTGGAAAAGACTCTACTCTAACACTAAGACTAACTTCCGTGAGGTTGCAGTCAAAGGATTCTGGGATATGTATGATCCAGAGGGATATTCTCTCTGGTTCTGTGACTACAAATACAATGATGAGAACACCGTTTCTTTCGTGACGCTGAACAAGGTTGGAGGATTTCTTCAGAGGATGGATCTTGCTCGCAAGTATGCATTTGGAAAGATGCTTGTCATTGGATCAGAGCCTCCATTTAAGGTGAAGGGATTGTGGCTTTTCCGTGGACAAGAGATTCCAAAGTTTGTCATTGATGAATGCTATGATATGGAGCTGTATGAGTGGACCAAGGTTGACATCTCTGACGAAGCTCAAAAAGAGCGTGCCAGTCAGATGATTGAAGATGCTGAACCATTTGAGGGTGAGGCTCTTTTGGATGCCAAGTGCTTTAAGTGA 1248 0.4463 MALILHATKENKNAYKTLIAAEYVGVKVQLVPDFQMGVSNKTPQFLKMNPIGKVPVLETPDGPIFESNAIARYVARLGENNLFGSSPIDQAHVEQWIDFSSLEIDANLMKVFLPRLGFAPYLPPAEEAALSALKRSFEALNTHLASNTYLVGESVTLADIITTANLYLGFAKLLVKSFTSEFPHVERYFWTLINQPNFRKIFGQVKQTEAMPPIQSAKKPAQPKPKTKEEPKKAAKAEPEKPKEEAEEEAPKPKPKNPLDLLPPSKMVLDDWKRLYSNTKTNFREVAVKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVIDECYDMELYEWTKVDISDEAQKERASQMIEDAEPFEGEALLDAKCFK* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5002 415 Pfam Glutathione S-transferase, C-terminal domain 126 196 IPR004046 -
Tpr2g5002 415 PANTHER - 1 415 - -
Tpr2g5002 415 Pfam Elongation factor 1 gamma, conserved domain 254 362 IPR001662 GO:0003746|GO:0006414
Tpr2g5002 415 Gene3D - 79 216 - -
Tpr2g5002 415 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Tpr2g5002 415 SUPERFAMILY Thioredoxin-like 2 77 IPR036249 -
Tpr2g5002 415 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 255 415 IPR001662 GO:0003746|GO:0006414
Tpr2g5002 415 CDD GST_N_EF1Bgamma 5 77 - -
Tpr2g5002 415 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Tpr2g5002 415 SFLD Glutathione Transferase (cytosolic) 5 189 IPR040079 -
Tpr2g5002 415 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Tpr2g5002 415 CDD GST_C_EF1Bgamma_like 89 211 - -
Tpr2g5002 415 SUPERFAMILY GST C-terminal domain-like 73 213 IPR036282 -
Tpr2g5002 415 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 255 415 IPR036433 GO:0003746|GO:0006414
Tpr2g5002 415 SUPERFAMILY eEF1-gamma domain 255 415 IPR036433 GO:0003746|GO:0006414
Tpr2g5002 415 MobiDBLite consensus disorder prediction 222 255 - -
Tpr2g5002 415 MobiDBLite consensus disorder prediction 210 260 - -
Tpr2g5002 415 Gene3D Glutaredoxin 1 74 - -
Tpr2g5002 415 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 415 IPR044628 GO:0004364
Tpr2g5002 415 SFLD Main (cytGST) 5 189 - -
Tpr2g5002 415 SMART EF1G_2 254 362 IPR001662 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5002 Tpr-Chr2 55817144 55819819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5002 1 415 Eukaryotic Initiation Factors Gene Family AT1G57720 75.721 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5002 K03233 - gmx:100787125 664.455