Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4993 ATGTCTGATAGGGTGGAAACAGTTGCAAGATTAGCACAATGGAAAATCGATAACTTTGGACCTTGTTCTTACAAAAAATCCGATCCTTTTAAGCTCGGAATTTGGAACTGGCACTTTTCAATAGTAAGGAATAGATTCTTCTCCATACATCTTTTTCCAGAATCTTCTCGTATTTCTAAGGAACATCCACCTGTTGCCAGATTCATTCTTCGTGTCTCGGTTGCTGGTTCATCTCGCAAATTTATTATTTCTCCTGTTTATGAAAGGCTGCTTAGGACACAAGATGACTTTGTCTGGCCTGTTGACACTGCTTTTATGGGCCGCTTCATCATTGATGTTGAGTTTCTTGACCTGAAGATATGCCATATGAATGGTGGAGAACCTAGTTCTGTATGGTCATATGATGGAAATTCACAATGTGTTGAAGCTCAAAGAAGTACTCTCCATTGCCTCTCTCGCATGCTTGATGAGGCTATACTTGCTGACCTAACCATTATCACGGCTGATGGTACGTTGAGAGCTCACAAGGCAATTTTGTCAGCGAGTTCCCCCGTGTTTCAAAGCATGTTTCATCACAACCTAAAGGAAAAAGAGTCTTCAACAATCCATATCGAAGACATGTCACTTGAATCATGCACTGCTCTTCTAAGTTACTTGTATGGAACAATTAAACAAGAAAATTTCCGCAAACACTGTCTTGCATTGCTCGGAGCCGCCAATAAGTATGATATTGGTAGTCTTAAAGATTTATGTGAGGAAAACCTTCTGGAAGATATTAACTCAAACAATGTTCTTGAGATGCTAAATGAGGCTTGGTTTTATCAATTACACAAGTTAAAGAAAGGATGTTTAACATTCTTATTTGAATTTGGTAAAATATATGATGTTAAAGATGATGAAATAAATAACCTTTTCCAGCATGCAGATAGGGAGCTAGTGATGGAGATGTTTCAGGTGATGCTTACAATTTCCAACCCAGAATAG 984 0.3841 MSDRVETVARLAQWKIDNFGPCSYKKSDPFKLGIWNWHFSIVRNRFFSIHLFPESSRISKEHPPVARFILRVSVAGSSRKFIISPVYERLLRTQDDFVWPVDTAFMGRFIIDVEFLDLKICHMNGGEPSSVWSYDGNSQCVEAQRSTLHCLSRMLDEAILADLTIITADGTLRAHKAILSASSPVFQSMFHHNLKEKESSTIHIEDMSLESCTALLSYLYGTIKQENFRKHCLALLGAANKYDIGSLKDLCEENLLEDINSNNVLEMLNEAWFYQLHKLKKGCLTFLFEFGKIYDVKDDEINNLFQHADRELVMEMFQVMLTISNPE* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4993 327 ProSiteProfiles BTB domain profile. 161 220 IPR000210 GO:0005515
Tpr2g4993 327 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 1 327 - -
Tpr2g4993 327 SMART BTB_4 161 259 IPR000210 GO:0005515
Tpr2g4993 327 SUPERFAMILY POZ domain 145 257 IPR011333 -
Tpr2g4993 327 CDD BTB_POZ_ZBTB_KLHL-like 160 242 - -
Tpr2g4993 327 Gene3D Potassium Channel Kv1.1; Chain A 133 288 IPR011333 -
Tpr2g4993 327 PANTHER OS08G0495500 PROTEIN-RELATED 1 327 IPR044714 -
Tpr2g4993 327 Pfam BTB/POZ domain 153 257 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4993 Tpr-Chr2 55723120 55725919 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tpr2g4993 BTB 5.3e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4993 K10523 - gmx:100787262 534.643