Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4988 ATGGAGCTTGGTTTGGATAATAGTAAATTACAATTACAACCACAAAACTTGAAGCAAGAACAAAAGCTGCTGCAACAGCAGGAGCAGCATTTTCATGTGTTGGCAGTAGATGATAGTGTCATTGATAGGAAGCTTCTAGAGAGACTCTTTAGAGGTTCTTCATGCAAAGTTACATGTGTGGACTCTGGAGATAAGGCTTTGAAATATCTTGGACTGAATAATATTGATGAACAACTTGATAACAATTTTTCTTCAACAAAATCTATATTAGAATCATCATCTCCTGATTCTCCTCCTCTTATTCCTAAACCATTGCAGCTGAAAGAGGGAATTAGCAAAGTGAATTTGATCATGACAGATTATTGCATGCCTGGGATGAGTGGCTATGATTTACTTAAAAGAGTCAAGGGATCTTATTGGAAAGATGTTCCAGTTGTGATCATGTCATCAGAAAATGTACCTTCCAGAATTAGCATGTGCTTGGAAGAAGGTGCAGAAGAGTTTCTATTAAAACCTCTTCAATTATCAGATTTGCAGAAGCTTCAGCCATACTTTCTTAAATCACTAGATAATTCTTCTGATGAACAAGAATCTGCAAACAGTTCCACTTCTACCACAGATTTTGACAACGATGATGATGACGATGATCTCATCGACAACAATAATAGTATTAGCAAAAAGAAGGCTATGTCTCCTGAGTCTCTGGAGATATCAAGGCCCAAAATGAAAGGGTTGGCGTGCGGAATTAAGAGTTCTTGCATATTATTAATTAGTTTAATTATGATTATGTTTCTAATTATGGTTTTCTCCTAA 813 0.3604 MELGLDNSKLQLQPQNLKQEQKLLQQQEQHFHVLAVDDSVIDRKLLERLFRGSSCKVTCVDSGDKALKYLGLNNIDEQLDNNFSSTKSILESSSPDSPPLIPKPLQLKEGISKVNLIMTDYCMPGMSGYDLLKRVKGSYWKDVPVVIMSSENVPSRISMCLEEGAEEFLLKPLQLSDLQKLQPYFLKSLDNSSDEQESANSSTSTTDFDNDDDDDDLIDNNNSISKKKAMSPESLEISRPKMKGLACGIKSSCILLISLIMIMFLIMVFS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4988 270 MobiDBLite consensus disorder prediction 191 206 - -
Tpr2g4988 270 SMART REC_2 31 182 IPR001789 GO:0000160
Tpr2g4988 270 Pfam Response regulator receiver domain 113 180 IPR001789 GO:0000160
Tpr2g4988 270 Gene3D - 32 223 - -
Tpr2g4988 270 MobiDBLite consensus disorder prediction 191 214 - -
Tpr2g4988 270 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 14 246 - -
Tpr2g4988 270 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 246 IPR045279 GO:0009736
Tpr2g4988 270 ProSiteProfiles Response regulatory domain profile. 32 186 IPR001789 GO:0000160
Tpr2g4988 270 CDD REC_typeA_ARR 33 181 - -
Tpr2g4988 270 SUPERFAMILY CheY-like 31 181 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4988 Tpr-Chr2 55667869 55671233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4988 28 188 Response Regulator Gene Family AT3G57040 56.790 5.26e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g4988 Response_reg 1.9e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4988 K14492 - gmx:100786187 281.952