Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4984 ATGGCTACTATTACTGGCGGCGCCGCCGTTCGCATAATCCCCTCCGCTACCAGAGCCACCGTCTCAGTCTCCTCTTCTTCCCGTTCCTTTTTCTCATTTTCATCCTCTTCAAATTCCGTTTCCTCGCTCAACTGCTTGCGGTTATCTCCTCGCATTTCTCATCTGTTTCTCGACCAGCGAAGATCAGAAGTTCGTGTTTCGAGTGGACGATTTGGAACGGTTTCTACTCCGAAAGCGTTTGCGTCTGATCCTGATCAGTTGAAGAGTGCTAGAGAAGATATCAAGGAGCTTCTCAAGACTAAGTTCTGTCATCCTCTTTTGATTCGTTTGGGATGGCATGATGCTGGCACTTATAATAAGAATATTGAGGAGTTTCCACAAAGAGGTGGAGCCAATGGTAGCTTAAGATTTGAAGCGGAGTTGAAACATGGAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTCCAGCCAATCAAAGACAAATATTCAGGCGTGACATATGCTGACTTATTTCAGTTAGCTGGTGCTACTGCTGTGGAGGAAGCTGGAGGCCCAAAAATTCCCATGAAATATGGAAGAGTAGATGTCACTGGACCTGAACAATGCCCCGAAGAAGGGAGACTTCCTGATGCAGGCCCCCCTTCACCTGCTGATCATCTGCGCCAAGTTTTCTACCGAATGGGGTTGAACGACAAGGAAATTGTTGCATTATCTGGTGCACACACACTGGGGCGGTCCAGACCAGACCGTAGTGGCTGGGGCAAACCCGAGACTAAATACACGAAAGATGGGCCAGGAGCACCTGGGGGACAATCCTGGACTGCACAATGGTTAAAATTTGACAACTCTTACTTCAAGGACATCAAAGAAAAAAAGGATGAAGATTTATTGGTCTTGCCAACTGATGCTGCTCTTTTTGACGATCCTTCCTTCAAGGTATATGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCACATGCCAAACTTAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGCATTGTACTAGATGGTTCTCCAAATGCAGTGGGAGAGAAGTTTGTTGCAGCCAACTACTCCTCTGGAAAGAAAGAGCTGTCTGATGCTATGAGGCAGAAGATACGGGCTGAAGTTGAGGCGGTTGGCGGAAGCCCAGATAAGGCTCTAAAGTCAAACTATTTTCTAAACATCATCATTGTTATTGCTGTTTTGGCTATTTTGACATCCCTGCTTGGAAACTAA 1269 0.4586 MATITGGAAVRIIPSATRATVSVSSSSRSFFSFSSSSNSVSSLNCLRLSPRISHLFLDQRRSEVRVSSGRFGTVSTPKAFASDPDQLKSAREDIKELLKTKFCHPLLIRLGWHDAGTYNKNIEEFPQRGGANGSLRFEAELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVTGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFDDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDGSPNAVGEKFVAANYSSGKKELSDAMRQKIRAEVEAVGGSPDKALKSNYFLNIIIVIAVLAILTSLLGN* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4984 422 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 374 422 - -
Tpr2g4984 422 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 5 357 - -
Tpr2g4984 422 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 5 357 IPR044831 GO:0004601|GO:0034599
Tpr2g4984 422 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 374 422 IPR044831 GO:0004601|GO:0034599
Tpr2g4984 422 ProSiteProfiles Plant heme peroxidase family profile. 107 361 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g4984 422 ProSitePatterns Peroxidases proximal heme-ligand signature. 234 244 IPR019793 -
Tpr2g4984 422 SUPERFAMILY Heme-dependent peroxidases 81 343 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr2g4984 422 CDD ascorbate_peroxidase 79 345 - -
Tpr2g4984 422 Gene3D - 90 343 - -
Tpr2g4984 422 PRINTS Haem peroxidase superfamily signature 104 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g4984 422 PRINTS Haem peroxidase superfamily signature 166 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g4984 422 PRINTS Haem peroxidase superfamily signature 184 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g4984 422 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g4984 422 PRINTS Haem peroxidase superfamily signature 274 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g4984 422 Pfam Peroxidase 91 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g4984 422 Gene3D Peroxidase, domain 2 212 335 - -
Tpr2g4984 422 MobiDBLite consensus disorder prediction 241 270 - -
Tpr2g4984 422 PRINTS Plant ascorbate peroxidase signature 83 103 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tpr2g4984 422 PRINTS Plant ascorbate peroxidase signature 104 119 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tpr2g4984 422 PRINTS Plant ascorbate peroxidase signature 165 183 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tpr2g4984 422 PRINTS Plant ascorbate peroxidase signature 184 196 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tpr2g4984 422 PRINTS Plant ascorbate peroxidase signature 303 327 IPR002207 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4984 Tpr-Chr2 55604347 55611575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4984 107 337 Peroxidase AT2G18140 28.947 4.15e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4984 K00434 - vvi:100254009 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4984 2 55604347 55611575 Tpr2g4984 2 55604347 55611575 ECH