Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4983 ATGGTGTTTGACGGAGAAGCGGCGGCGTCGTTGGTGAAGGAGCTGAGGTTGAGCTTCAATTCTGGTAAGACAAGAAGTTATGAATGGAGAATATCACAGCTGAAGGCTTTTTTGAAGATGGTTGTTGAACAAGAGGATCAAATTGTTGAAGCTCTTCGTTCTGATCTTGCTAAACCACCACTTGAAACCGTTGTCTATGAGATTGGTATGTTTAAAAACTCATGTGAAGTCACACTAAAGGAATTGAAACAATGGATGACTCCAGAAAAGGCTAAAACTTCAATCACAACTTTTCCTTCTTCGGCTGAAATAGTACCTGAACCACTTGGTGTTGTGTTAGTCATCTCTGCATGGAACTATCCATTTTTGCTATCCCTTGATCCAGTTGTTGGAGCTATAGCAGCTGGTAATGCCGTGGTTCTAAAACCATCAGAAATCGCTCCAGCCTCCTCTACACTGTTGTTAAAATTGTTAGGGGAGTACGTGGATAATTCATGTGTAAGAGTTGTGGAGGGTGCAGTTGATGAAACTACTGCATTGTTACAACAAAAGTGGGACAAAATTTTATATACAGGTAATGGAAAAGTGGGAAGGATAGTGATGGCTGCTGCTGCAAAACACCTTACACCAGTTATTCTAGAGCTTGGAGGAAAATCTCCAACTGTTGTTGATTCAAATGTCAATTTAGAGGTTACGGCTAGGCGGATAATTTCAGGTAAGTGGGGCTGCAACAATGGACAAGCCTGCATTTCTCCTGATTACATTATAACAACAAAAGACTTTGCTCCCAAATTGGTAGACGCCTTAAAAATTGAATTAGAAAACTGCTTTGGAAAGAATCCATTAGAATCTGTTGATTTGTCGCGCATTGTGAGTTCTAACCACTTTGCTCGCTTGACAAAGTTCTTGGATGATGATAAGGTTTCTGGCAAGATTGTTTTTGGAGGCGAAAAGGATGAAAGCAAATTGAGGATTGCTCCGACTCTTTTATTAGACGTTCCTCGAGATTCTCTTATAATGAGCGAGGAGATCTTTGGTCCATTGCTCCCCATCATCACGGTGAATAAGCTGGAAGAAAGCTTTGATTTCATCAATGAAGGAACAAAGCCGCTTGCTGCATATTTATTTACAAACGACAACAAGTTCAAGGAGGAATTTGTGAAGAATGTTTCTGCCGGGGGTTTGCTTATCAATGACACTGTCTTACATGTTGTGGTTCATACATTGCCATTTGGGGGAGTTGGTGAGAGTGGAATGGGTGCCTACCATGGAAAATTCTCTTTTGACGCTTTTACTCACAGAAAGGCAGTTCTTTATCGCGGTTTTACAGGCGATGGTTCGATAAGGTATCCACCTTACACTGATACAAAGCAGAAAACGATGAAGGCTCTAGTCGCGGGTGATGTTACTGGTGTAGTACGTGCTCTTTTTGGATGGTCCTAG 1443 0.4151 MVFDGEAAASLVKELRLSFNSGKTRSYEWRISQLKAFLKMVVEQEDQIVEALRSDLAKPPLETVVYEIGMFKNSCEVTLKELKQWMTPEKAKTSITTFPSSAEIVPEPLGVVLVISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEIAPASSTLLLKLLGEYVDNSCVRVVEGAVDETTALLQQKWDKILYTGNGKVGRIVMAAAAKHLTPVILELGGKSPTVVDSNVNLEVTARRIISGKWGCNNGQACISPDYIITTKDFAPKLVDALKIELENCFGKNPLESVDLSRIVSSNHFARLTKFLDDDKVSGKIVFGGEKDESKLRIAPTLLLDVPRDSLIMSEEIFGPLLPIITVNKLEESFDFINEGTKPLAAYLFTNDNKFKEEFVKNVSAGGLLINDTVLHVVVHTLPFGGVGESGMGAYHGKFSFDAFTHRKAVLYRGFTGDGSIRYPPYTDTKQKTMKALVAGDVTGVVRALFGWS* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4983 480 Pfam Aldehyde dehydrogenase family 19 437 IPR015590 GO:0016491
Tpr2g4983 480 PANTHER ALDEHYDE DEHYDROGENASE 2 480 IPR012394 GO:0006081
Tpr2g4983 480 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 417 IPR016163 GO:0016620
Tpr2g4983 480 PANTHER ALDEHYDE DEHYDROGENASE 2 480 - -
Tpr2g4983 480 PIRSF ALDH 2 475 IPR012394 GO:0006081
Tpr2g4983 480 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 213 220 IPR029510 GO:0016491
Tpr2g4983 480 SUPERFAMILY ALDH-like 11 443 IPR016161 GO:0016491
Tpr2g4983 480 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 18 435 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4983 Tpr-Chr2 55581636 55585922 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4983 3 480 Aldehyde Dehydrogenase Gene Family AT4G34240 64.644 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4983 K00128 - gmx:100783726 803.897