Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4976 ATGGCATCAGAGCTTCAATTGCCACCGGGCTTCAGATTCCATCCTACGGATGAGGAGCTCGTGATGCACTATCTCTGCCGGAAATGCACTTCTCAACCTATCGCCGTTCCGATCATCGCCGAAATTGATCTCTATAAATATGATCCTTGGGACCTTCCTGGTATGGCTTCTTATGGAGAAAAGGAATGGTACTTTTTCTCGCCACGAGACAGAAAATATCCGAACGGTTCAAGGCCGAACCGGGCGGCTGGGTCTGGATATTGGAAGGCAACCGGGGCGGATAAACCGATAGGTCATCCTAAACCGGTTGGGATCAAAAAAGCGTTGGTGTTTTACGCGGGTAAAGCACCAAAAGGTGATAAAACCAATTGGATTATGCATGAGTATCGTTTGGCTGACGTAGATCGATCCATTCGCAAAAAGAACAGCTTAAGGTTGGATGATTGGGTGCTTTGCCGTATTTACAACAAGAAGGGTACTATCGAGAAACAACCAAGCAGCGGTGTTGTTAGCCGGAAAATTGAACACTCGGAATTTGAAGACAAGAAGCCGGAGATTCTGAAACGTGGAGGCGGTCTTCCACCGCATCCTCCACCACAAACAACAGCGGGAATTAGGGATTACATGTATTATGACAATTCGGATTCTATCCCTAAGCTGCACACCGATTCGAGCTGCTCAGAACACGTGGTGTCACCGGAGTTTGCTAGTGAGGTGCAAAGCGAGCCTAAGTGGAACGAGTGGGAAAAGAACCTTGAATTTCCTTTTAATTACGTGGATGCAACTCTTAACAGTGGTTTTGGATCCCAATTTCAGACCAATAATCAGATGTCTCCTTTGCAGGATATGTTCATGTACCTACCCAAATCCTTTTGA 876 0.4646 MASELQLPPGFRFHPTDEELVMHYLCRKCTSQPIAVPIIAEIDLYKYDPWDLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRSIRKKNSLRLDDWVLCRIYNKKGTIEKQPSSGVVSRKIEHSEFEDKKPEILKRGGGLPPHPPPQTTAGIRDYMYYDNSDSIPKLHTDSSCSEHVVSPEFASEVQSEPKWNEWEKNLEFPFNYVDATLNSGFGSQFQTNNQMSPLQDMFMYLPKSF* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4976 291 MobiDBLite consensus disorder prediction 184 203 - -
Tpr2g4976 291 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Tpr2g4976 291 PANTHER NAC TRANSCRIPTION FACTOR 56 2 269 - -
Tpr2g4976 291 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Tpr2g4976 291 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Tpr2g4976 291 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 2 269 - -
Tpr2g4976 291 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4976 Tpr-Chr2 55535974 55538469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4976 1 291 NAC Transcription Factor Family AT1G01720 70.333 1.07e-148 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr2g4976 NAM 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4976 - - gmx:100805768 531.176