Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4953 ATGACTTCTTCAACAGTTGAACCCTGCAAATCTGAGGATTTTCAGGTTGATATTGAGAAGAATCAGCAGGATGTAAGGTCTCAATGGGTGCTTAATGCACCTGAGCCTCCAAGTCCTTGGCATGTGACTATAGATTCTGTGAAGAAAACAGTTTCTAATTATAGAGAGAAAGTTTCTTCTCTATGTGATCAACCATGTAGTACACTCTTTTCAGCTTTGCAGGTTGTTTTTCCTATTCTTGTTTGGGGAAGAAACTACACTGCTGCTAAATTTAGGAAAGATGTTCTTGCTGGTCTCACTATTGCTAGTCTCTGTATTCCTCAGAGCATAGGATATGCAACATTAGCAAACCTTGCTCCTCAATATGGACTTTATACGAGTGTTGTACCGCCACTTATCTATGCTGTAATGGGAACTTCAAGAGAGATAGCAATTGGTCCAGTGGCAGTGGTTTCCTTGCTGTTATCCTCAATGGTTCAAAAATTAATAGACCCTTCAACTGATCCAATTGGTTATACAAAGCTCATTTTTCTAACTACTCTCTTTGCCGGTATCTTCCAAACTGCGTTTGGATTATTCAGGCTGGGATTTCTTGTGGATTTTCTGTCACATGCTGCAATTGTTGGATTTGTAGCAGGAGCTGCAATTGTGATTGGGCTTCAACAGTTGAAGGGACTGTTTGGAATCACTCATTTTACAACAAAAACAGACATAATCTCTGTCATGAAAGCTGTTTGGGAAGCATTTCATAATCCATGGAACCCTCATAATTTCTTCCTCGGAGCTTCATTCTTGGTGTTCATCCTAACAACTAGATTTGTGGGTAAAAGGAAGAAGAAATTGTTCTGGTTGGCATCAATTTCACCACTAGTATCAGTTATACTATCGACTCTCGTTGTTTTTCTAACACGAGCCGATAAAAATGGAGTCAAAATTGTGAAACATGTCAAAGGGGGACTCAATCCAATCTCCATCAATCAACTAGACTTTAACAGTCCCCATGTTGTAGATGTCGCGAAAATTGGACTTATTGTCGCTGTTGTTGCACTAACCGAATCTGTTGCTGTTGGACGATCTTTTGCATCCATAAAAGGATACCAACTTGATGGAAACAAAGAGATGATGTCAATAGGCTTCACAAACATCATTGGATCTCTTACATCTTGTTATGTTGCAACTGGTTCGTTCTCTCGTACGGCTGTTAATTACGCGGCTGGATGTGAAAGTTTAATATCAAACATTGTGATGGCCATTACAGTGATGATATCACTGCAGTTTTTGACAAATCTATTGTATTATACACCAATTGCTATAATTGCATCAGTGATCATCTCAGCTCTACCAGGACTTATAGACATAACTGAAGCTTACAAAATTTGGAAGGTTGATAAGCTAGATTTTCTTGCTTGCATTGGTGCCTTCTTTGGTGTACTTTTTGCTTCTGTGGAGATTGGTCTTCTAGTAGCGGTGGCAATATCATTTACAAAGATAATTGTGATCTCAATTAGACCAAGCACAGAAACTCTAGGAAAACTTCCTGGAACTGATATGTTCTGTGATGTTGATCAGTATCCAATGGCAATTCAGGTTCCAGGGGTTATGATAATACGTATGAAATCTGCATTACTTTGCTTTGCAAATGCCAATTTCGTCAAAGAAAGGATCATCAAATGGGTGACTCAAGAAGAATCAGAAGATGACAAGGGAAATTCAAAAAGCTCCATTCAACTCGTTATTCTTGACACTGCGAATTTGGTGAACATTGACACCTCCGGAATTGCTTCTTTGGAGGAACTATACAAATGTTTGTCTTCACATGGGAAGCAGTTGGCAATTGCAAATCCGAGATGGCAAGTGATTCACAAGCTAAAGGTGTCCAACTTTATCAACAAAATAGGTGGAAGAGTCTATCTGACTGTTGAAGAAGCTGTTGTTGCAAACAACAAGAGTAATCAATTCTAA 1962 0.3899 MTSSTVEPCKSEDFQVDIEKNQQDVRSQWVLNAPEPPSPWHVTIDSVKKTVSNYREKVSSLCDQPCSTLFSALQVVFPILVWGRNYTAAKFRKDVLAGLTIASLCIPQSIGYATLANLAPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMVQKLIDPSTDPIGYTKLIFLTTLFAGIFQTAFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLFGITHFTTKTDIISVMKAVWEAFHNPWNPHNFFLGASFLVFILTTRFVGKRKKKLFWLASISPLVSVILSTLVVFLTRADKNGVKIVKHVKGGLNPISINQLDFNSPHVVDVAKIGLIVAVVALTESVAVGRSFASIKGYQLDGNKEMMSIGFTNIIGSLTSCYVATGSFSRTAVNYAAGCESLISNIVMAITVMISLQFLTNLLYYTPIAIIASVIISALPGLIDITEAYKIWKVDKLDFLACIGAFFGVLFASVEIGLLVAVAISFTKIIVISIRPSTETLGKLPGTDMFCDVDQYPMAIQVPGVMIIRMKSALLCFANANFVKERIIKWVTQEESEDDKGNSKSSIQLVILDTANLVNIDTSGIASLEELYKCLSSHGKQLAIANPRWQVIHKLKVSNFINKIGGRVYLTVEEAVVANNKSNQF* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4953 653 Gene3D STAS domain 503 650 IPR036513 -
Tpr2g4953 653 Pfam STAS domain 524 643 IPR002645 -
Tpr2g4953 653 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Tpr2g4953 653 Pfam Sulfate permease family 91 471 IPR011547 GO:0016021
Tpr2g4953 653 ProSiteProfiles STAS domain profile. 543 647 IPR002645 -
Tpr2g4953 653 CDD STAS_SulP_like_sulfate_transporter 524 633 - -
Tpr2g4953 653 PANTHER SULFATE TRANSPORTER 2.2 25 648 IPR030315 GO:0008272|GO:0015116
Tpr2g4953 653 PANTHER SULFATE TRANSPORTER 25 648 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr2g4953 653 TIGRFAM sulP: sulfate permease 78 635 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr2g4953 653 SUPERFAMILY SpoIIaa-like 528 644 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4953 Tpr-Chr2 55303533 55311312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4953 20 646 Inorganic Solute Cotransporters AT5G10180 67.250 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4953 K17469 - gmx:100817831 1079.7