Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4925 ATGTGTGGAATCTTAGCAGTTTTAGGTGTGGTCGACAACAGTCAGTTGAAACGTGCTCGCATAATCGAATTGTCTCGGAGATTGAGACATAGAGGCCCTGATTGGAGTGGTTTACATTCTTATCAAGATTGTTACCTTGCTCATCAACGTCTTGCTATTGTCGACCCTACTTCTGGAGATCAACCTCTTTACAATGAAGACAAGACCGTTATTGTCACTGTAAATGGGGAGATATACAACCATAAGAAATTGAGACAGGGACTGAGTTCTCATAAATTTCGAACCGGTAGTGATTGTGAAGTGATTGCTCATCTTTATGAAGAACATGGGGAAGAGTTTGTTGATATGCTGGATGGGATGTTCTCATTTGTGCTTCTTGATACTAAAGATAAAAGTTTTATTGCGGCTCGTGATGCTATTGGCATTACCCCTCTTTACTTGGGTTGGGGCCATGATGGATCAATATGGTTTGCATCTGAAATGAAAGCTCTGATGGATGATTGTGAGAGATTCATACCTTTTCCTCCGGGGCATATCTATTCCAGCAAACAGGGAGGATTAAGAAGGTGGTACAATCCACCATGGTTCTCAGAGTCAATTCCATCAACACCCTATGATTCAACGATTTTGCGTGAGGCCTTTGAGAGGGCTGTTTTTAAAAGAATGATGACTGATGTACCTTTTGGAGTTCTTTTGTCTGGAGGACTAGACTCATCACTTGTTGCTGCAGTGGCTAATCGATATTTGGCTAAATCTGATGCTGCTCGTCAGTGGGGATCGCAGTTACATACTTTCTGCATTGGTTTAAAGGGATCTCCGGATTTGAAAGCTGCACAAGAGGTAGCAGATTATCTTGGCACTTGTCACCATGAACTTCATTTCACGGTTCAGGAAGGTATAGATGCAATTGAGGAAGTCATTTACCATATTGAAACATATGACGTAACGACTATCAGAGCAAGTACTCCAATGTTTCTTATGTCCAGAAAAATCAAATCATTGGGGGTGAAAATGGTTCTTTCTGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTGTATTTCCATAAGGCGCCTAACAAGGAAGAGCTTCATCAAGAAACATGCCGAAAAATTAAAGCACTTCATCTTTATGACTGTCTGAGAGCCAATAAATCAACTTCAGCTTGGGGTATAGAGGCACGTGTACCGTTCTTGGATAAAGAATTTATCAGCACATCCATGGCTATTGATCCGGAGTGGAAAATGATAAGGCCTGATCTTGGAAGGATAGAGAAATGGGTATTGCGCAATGCATTTGATGATGATAAGACTCCATATTTGCCAAAGCACATATTGTACAGGCAGAAGGAACAGTTCAGTGATGGTGTCGGATACAGTTGGATTGATGGTTTGAAGGATCATGCTAGCGCACAAGTCACAGATGCAATGCTGAAGCATGCCAACTTTGTTTACCCTGAAAACACTCCAACCACAAAAGAGGGATACCACTATAGGACAATTTTTGAGAAGTTATTTCCAAAGAATTCTGCCAGGTTATCAGTGCCAGGAGGTCCTAGTGTGGCATGCAGTACTGCAAAAGCTGTGGAATGGGACGCAGCATGGTCCAAAAATCTCGACCCTTCTGGACGTGCCGCGCTCGGTGTTCATGCAGATGCATACAAGGATGCAGTAGATACCAAAATAGCCGAGCCCAACAACAAATCTCTCTGA 1713 0.4232 MCGILAVLGVVDNSQLKRARIIELSRRLRHRGPDWSGLHSYQDCYLAHQRLAIVDPTSGDQPLYNEDKTVIVTVNGEIYNHKKLRQGLSSHKFRTGSDCEVIAHLYEEHGEEFVDMLDGMFSFVLLDTKDKSFIAARDAIGITPLYLGWGHDGSIWFASEMKALMDDCERFIPFPPGHIYSSKQGGLRRWYNPPWFSESIPSTPYDSTILREAFERAVFKRMMTDVPFGVLLSGGLDSSLVAAVANRYLAKSDAARQWGSQLHTFCIGLKGSPDLKAAQEVADYLGTCHHELHFTVQEGIDAIEEVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKEELHQETCRKIKALHLYDCLRANKSTSAWGIEARVPFLDKEFISTSMAIDPEWKMIRPDLGRIEKWVLRNAFDDDKTPYLPKHILYRQKEQFSDGVGYSWIDGLKDHASAQVTDAMLKHANFVYPENTPTTKEGYHYRTIFEKLFPKNSARLSVPGGPSVACSTAKAVEWDAAWSKNLDPSGRAALGVHADAYKDAVDTKIAEPNNKSL* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4925 570 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Tpr2g4925 570 TIGRFAM asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 366 IPR006426 GO:0004066|GO:0006529
Tpr2g4925 570 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
Tpr2g4925 570 PANTHER ASPARAGINE SYNTHETASE 1 558 - -
Tpr2g4925 570 Gene3D HUPs 195 513 IPR014729 -
Tpr2g4925 570 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 3 192 IPR029055 -
Tpr2g4925 570 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Tpr2g4925 570 Pfam Asparagine synthase 210 361 IPR001962 GO:0004066|GO:0006529
Tpr2g4925 570 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 200 484 - -
Tpr2g4925 570 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 1 558 - -
Tpr2g4925 570 CDD AsnB 2 192 IPR033738 -
Tpr2g4925 570 PIRSF Asn_synthetase_glu-h 1 361 IPR006426 GO:0004066|GO:0006529
Tpr2g4925 570 PIRSF Asn_synthetase_glu-h 357 516 IPR006426 GO:0004066|GO:0006529
Tpr2g4925 570 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4925 Tpr-Chr2 55026414 55031763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4925 75 364 PRT Gene Family AT2G16570 27.010 3.01e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4925 K01953 - gmx:732660 1060.44