Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4918 ATGGTGTTTGACGGAGAAGCGGCGGCGTCGTTGGTGAAGGAGCTGAGGTTGAACTTCAATTCCGGTAAGACAAAAAGTTATGAATGGAGAATATCACATGTGAATGCTTTTTTGGAGATGGTTGTTGAACAAGAGGATCAAATTGTTGAAGCTCTTCGTTCTGATCTTGCTAGACCACCACTTGAAACTGTTGTCTATGAGATTGGTGTGTTTAAAAACTCATGTGAAGTCACGCTAAAGGAATTGAAACAATGGATGACACCAGAAAAGGCTAAAACTTCCATCACAACTTTTCCTTCTTCAGCTGAAATAGTACCTGAACCACTTGGTGTTGTGTTAGTCATATCTGCATGGAACTATCCATTTTGTAAGTTCACCTTTGTGTTGTCCCTCGATCCAGTTGTTGGAGCTATAGCAGCTGGTAATGTTGTGGTTCTAAAACCATCAGAAATTGCTCCAGCCTCCTCTGCACTGCTGGCAAAATTGTTAGGGGAGTACATGGATAATTCATGTGTAAGAGTTGTGGAGGGTGCAATTGATGAAACTACTGCATTGTTGCAACAAAAGTGGGACAAAATTTTATATACCGGTAATGGAAAAGTGGGAAGGATAGTAATGGCTGCGGCTGCAAAACACCTTACACCAATTATTCTAGAGCTTGGAGGAAAATCTCCAACTGTTGTTGATTCAAATGTGAATTTAGAGGTTACGGCTAGGCGGATAATTTCAGGCAAGTGGGGATGCAACAACGGACAAGCCTGCGTTGCTCCTGATTACATTATAACAACAAAAGACTTTGCTCCCAAATTGGTAGATGCCTTAAAAACGGAATTAGAAAATTTCTTTGGAAAGAATCCATTAGAATCAGTTGATTTGTCGCGCATTGTGAGTTCTAACCATTTTGCTCGCTTGACAAAGCTCTTGGATGACAATAAGGTTTCTGGCAATATTGTTTGTGGAGGTCAAAAGGATGAAAGCAAATTGAGGATTGCTCCGACTCTTTTATTAGATGTTCCACGAGATTCTCTTATAATGAGTGAGGAGATCTTTGGTCCATTGCTTATCAATGACACTGTCTTACATCTTGTGGTTCATACTTTCCCATTTGGGGGAGTTGGCGAGAGTGGAATGGGTGCATACCATGGAAAATTCTCCTTTGATGCTTTTACTCATAGAAAGGCAGTTCTTTATCGCGGTTTTACATGCGATGGATCAATAAGGTACCCACCTTATACTGATACAAAACAGAAAACGATGAAGACTCTAGTCGCGGGTGATGTTATTGGTGTAGTCCGTGCTCTTTTTGGATGGTCCTAG 1317 0.41 MVFDGEAAASLVKELRLNFNSGKTKSYEWRISHVNAFLEMVVEQEDQIVEALRSDLARPPLETVVYEIGVFKNSCEVTLKELKQWMTPEKAKTSITTFPSSAEIVPEPLGVVLVISAWNYPFCKFTFVLSLDPVVGAIAAGNVVVLKPSEIAPASSALLAKLLGEYMDNSCVRVVEGAIDETTALLQQKWDKILYTGNGKVGRIVMAAAAKHLTPIILELGGKSPTVVDSNVNLEVTARRIISGKWGCNNGQACVAPDYIITTKDFAPKLVDALKTELENFFGKNPLESVDLSRIVSSNHFARLTKLLDDNKVSGNIVCGGQKDESKLRIAPTLLLDVPRDSLIMSEEIFGPLLINDTVLHLVVHTFPFGGVGESGMGAYHGKFSFDAFTHRKAVLYRGFTCDGSIRYPPYTDTKQKTMKTLVAGDVIGVVRALFGWS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4918 438 PANTHER ALDEHYDE DEHYDROGENASE 351 438 IPR012394 GO:0006081
Tpr2g4918 438 PANTHER ALDEHYDE DEHYDROGENASE 2 354 IPR012394 GO:0006081
Tpr2g4918 438 SUPERFAMILY ALDH-like 11 405 IPR016161 GO:0016491
Tpr2g4918 438 PANTHER ALDEHYDE DEHYDROGENASE 2 354 - -
Tpr2g4918 438 PANTHER ALDEHYDE DEHYDROGENASE 351 438 - -
Tpr2g4918 438 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 18 221 IPR016162 GO:0016491
Tpr2g4918 438 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 376 393 IPR016162 GO:0016491
Tpr2g4918 438 PIRSF ALDH 2 355 IPR012394 GO:0006081
Tpr2g4918 438 PIRSF ALDH 353 432 IPR012394 GO:0006081
Tpr2g4918 438 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 222 354 IPR016163 GO:0016620
Tpr2g4918 438 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 355 375 IPR016163 GO:0016620
Tpr2g4918 438 Pfam Aldehyde dehydrogenase family 19 354 IPR015590 GO:0016491
Tpr2g4918 438 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 218 225 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4918 Tpr-Chr2 54950962 54955850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4918 3 438 Aldehyde Dehydrogenase Gene Family AT4G34240 57.143 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4918 K00128 - gmx:100783726 674.47