Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4849 ATGTTTGTGGAAATGAACTTGGTGTTTCTTCTATTGTTATTGTTGGCTAGTGTTTCTTCTTTTGCTCTTCCTCAGCTTGATTTACAAGAAGATGCACTATATGCATTGAAGTCATCTCTGAATGCTTCACCTAATCAGCTTACTAACTGGAACAAAAATCAAGTAAACCCTTGTACTTGGTCCAATGTTTACTGCGACCAAAATAGCAATGTTGTTCAAGTTTCACTAGCATTTATGGGATTCTCCGGAACCTTGACACCAAGAATAGGAGCTCTCAAAAGTCTTACAACTCTTTCTTTACAAGGGAATAACATCAGTGGCGACATACCAAAAGAATTTGGAAATCTTACAAGCTTAGTGAGATTGGATCTGGATCACAACATATTAACCGGTGAAATACCATCTTCTCTTGGTAATCTTAAAAAGCTTCAATTCTTGACATTAAGTCAAAACAATCTCAATGGGACTATTCCAGAATCACTTGGCAGTCTCCCAAACTTGAGCAATATTCTGCTAGACTCAAATGATTTCAGCGGACATATTCCAGAACAGTTATTCAATGTTCCTAAGTACAATTTCACTGGAAATAAGTTGGATTGTGGTGTAATTTATCAGCATCTTTGCACATCTGATAATGGAAATCAAGGTTCATCACACAAATCGAAAGTAGGTCTCATAGTTGGAACAGTTATAGGTTTAATTGTTATTCTTTTTCTTGGTGGCCTTCTGTTTTTCTGGTGCAAACGGTACAAGCGTGAAGTTTTTGTAGATGTTCCAGGTGATGTTGATCGGCGAATTACATTGGGTCAAATAAAAAGTTTTTCCTGGAGAGAACTGCAGATAGCTACAGACAACTTCAGTGAGAGAAATGTTTTAGGACAGGGAGGATTCGGAAAGGTTTATAAAGGTGTTCTAGCTGATGGGACAAAAATTGCTGTCAAAAGGCTAACTGATTATGAAAGTCCCGGTGGTGATCAAGCTTTCCAGCGTGAAGTTGAGATGATAAGTGTTGCTGTCCATAGGAACCTTTTACGGCTCATTGGGTTTTGTACTACTCCAACTGAACGTCTCTTAGTTTATCCCTTCATGCAGAACTTAAGTGTTGCCTCTCGACTACGAGAACTCAAGCCTGGGGAATCTGTTTTGGATTGGGCTACAAGAAAACGAGTGGCTCTTGGAACAGCTCGTGGCCTTGAATATCTTCACGAGCAATGTGATCCCAAAATTATTCATAGAGATGTAAAGGCAGCTAATATATTACTAGATGGAGATTTTGAAGCAGTCGTCGGTGACTTTGGTTTGGCAAAATTGGTCGATGTTCGAAGGACTAATGTAACCACTCAAATTCGTGGGACAATGGGCCATATAGCTCCAGAATACTTGTCTACCGGAAAATCTTCAGAAAAGACAGATGTTTTTAGTTATGGGATTATGCTTTTGGAGCTTGTTACAGGTCAACGTGCAATTGACTTTTCACGTTTGGAAGATCAAGATGATGTGTTACTGCTTGACCATGCAAAGAAGCTGCAACGGGAGAAAAGACTGGATGTTATTGTCGACCGCAATCTTGATAAAAATTACAACATAGAAGAAGTTGAAGTGATAGTACAAGTTGCATTACTGTGCACGCAAGCAACGCCAGAAGATCGTCCGGCAATGTCAGAGGTTGTAAGAATGTTGGAAGGAGAGGGGCTAGCTGAAAGGTGGGAAGAATGGAGGCATCTGGAGGTTACTCGGACGCAAGACTCTGAGAGACTGCAAAGAAGATTTGCGTGGGGAGATGATTCAATTCATAACCAAGATGCAATCGAGTTGTCGGGTGGAAGATGA 1830 0.4022 MFVEMNLVFLLLLLLASVSSFALPQLDLQEDALYALKSSLNASPNQLTNWNKNQVNPCTWSNVYCDQNSNVVQVSLAFMGFSGTLTPRIGALKSLTTLSLQGNNISGDIPKEFGNLTSLVRLDLDHNILTGEIPSSLGNLKKLQFLTLSQNNLNGTIPESLGSLPNLSNILLDSNDFSGHIPEQLFNVPKYNFTGNKLDCGVIYQHLCTSDNGNQGSSHKSKVGLIVGTVIGLIVILFLGGLLFFWCKRYKREVFVDVPGDVDRRITLGQIKSFSWRELQIATDNFSERNVLGQGGFGKVYKGVLADGTKIAVKRLTDYESPGGDQAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVASRLRELKPGESVLDWATRKRVALGTARGLEYLHEQCDPKIIHRDVKAANILLDGDFEAVVGDFGLAKLVDVRRTNVTTQIRGTMGHIAPEYLSTGKSSEKTDVFSYGIMLLELVTGQRAIDFSRLEDQDDVLLLDHAKKLQREKRLDVIVDRNLDKNYNIEEVEVIVQVALLCTQATPEDRPAMSEVVRMLEGEGLAERWEEWRHLEVTRTQDSERLQRRFAWGDDSIHNQDAIELSGGR* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4849 609 Gene3D Ribonuclease Inhibitor 27 210 IPR032675 -
Tpr2g4849 609 ProSiteProfiles Protein kinase domain profile. 286 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4849 609 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 609 - -
Tpr2g4849 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Tpr2g4849 609 SUPERFAMILY Protein kinase-like (PK-like) 265 561 IPR011009 -
Tpr2g4849 609 SUPERFAMILY L domain-like 30 191 - -
Tpr2g4849 609 Gene3D Phosphorylase Kinase; domain 1 255 362 - -
Tpr2g4849 609 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 454 565 - -
Tpr2g4849 609 CDD TM_EGFR-like 221 252 - -
Tpr2g4849 609 Gene3D Transferase(Phosphotransferase) domain 1 363 580 - -
Tpr2g4849 609 ProSitePatterns Protein kinases ATP-binding region signature. 292 314 IPR017441 GO:0005524
Tpr2g4849 609 PANTHER LRR RECEPTOR-LIKE KINASE 5 609 - -
Tpr2g4849 609 Pfam Protein kinase domain 287 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4849 609 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Tpr2g4849 609 SMART serkin_6 286 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4849 Tpr-Chr2 54059642 54066836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4849 4 609 Receptor kinase-like Gene Family AT5G10290 72.459 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Tpr2g4849 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4849 - - gmx:100786654 989.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4849 2 54059642 54066836 Tpr3g1346 3 11927050 11933258 PCT