Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4843 ATGGAAGAACGTTATGAGATTATTAAAGGTATTGGGTCAGGAAATTTTGGAGTAGCAAAGCTTGTTAGGGAGAGACAAAGTGGTAAACTATATGCTGTCAAAATCATTGAGAGAGGCCTTAAGATTGATGAACATGTTCAAAGGGAGATTATAAATCATAGATCCTTGAAGCATCCTAATATCATTAGATTTAAGGAGGTTTTATGTACTCCAGCTCATCTAGCTATAGTAATGGAGTATGCAGCAGGTGGAGAACTATTTGAAAGAATATGTAGTGCCGGTAGATTCTGTGAAGACGAGGCAAGATATTTCTTCCAGCAGTTGATTTCTGGGGTCAGCTATTGTCATTCAATGGAAATTTGCCATAGAGATCTTAAGCTTGAAAACACACTTTTAGATGGAAGCTCTTCACCACAACTCAAAATATGCGACTTTGGTTACTCCAAGTCTTCTGTTCTGCATTCTCAGCCTAAATCTACGGTGGGAACTCCAGCATATATTGCACCAGAGGTTTTGTCAAGAAGAGAATATGATGGAAAGGTTGCTGATGTTTGGTCTTGTGGGGTTACCTTATATGTGATGCTAGTTGGTGGTTATCCTTTTGAAGATCCAGATGATCCAAGAAATTTCAGAAAGACAATTGAGAGAATCCTTAGGGTCCACTATTCAATTCCCGGTTATGTTCGTGTCTCCAAAGATTGCAGAGACCTTCTATCTCAAATATTTGTGGCCAACCCTGAGAAGAGAATCACTATCCCAGAAATTAAAAAGCACCCTTGGTTCCTTAATAAATTACCAATGGAATTTGTGGAAGAAGGGAAAAATGATGTGAATGGTGTGGTTGATTCATCTCAAAGTATTGAGGAAATACAGTCCATAATTCAAGAGGCACGGAAGCCAGGTGAAGGCCCAAAAATTGATGGACAATTTGTTGGAGGAGGCATGGATTTTGATGAGATGGATGCAGATGATGATTTTGATGATGATATAGAAACAAGTGGAGATTTTGATTTTGTTTGTGATATGTGA 1029 0.3848 MEERYEIIKGIGSGNFGVAKLVRERQSGKLYAVKIIERGLKIDEHVQREIINHRSLKHPNIIRFKEVLCTPAHLAIVMEYAAGGELFERICSAGRFCEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSSPQLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIERILRVHYSIPGYVRVSKDCRDLLSQIFVANPEKRITIPEIKKHPWFLNKLPMEFVEEGKNDVNGVVDSSQSIEEIQSIIQEARKPGEGPKIDGQFVGGGMDFDEMDADDDFDDDIETSGDFDFVCDM* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4843 342 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4843 342 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Tpr2g4843 342 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 3 334 - -
Tpr2g4843 342 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Tpr2g4843 342 CDD STKc_SnRK2 4 260 - -
Tpr2g4843 342 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Tpr2g4843 342 SUPERFAMILY Protein kinase-like (PK-like) 3 267 IPR011009 -
Tpr2g4843 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Tpr2g4843 342 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4843 342 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g4843 342 PANTHER SERINE/THREONINE KINASE 3 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4843 Tpr-Chr2 53986422 53990467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4843 4 271 CBL-interacting serine-threonine protein kinases AT4G24400 42.086 7.34e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tpr2g4843 Pkinase 3.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4843 K14498 - gmx:100807981 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4843 2 53986422 53990467 Tpr2g4843 2 53986422 53990467 ECH